Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1258

Experiment: BG11 with Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Nalidixic 0.00390625 mg/ml
1,280,548	+		Synpcc7942_1257	0.47	-0.3
1,280,566	-		Synpcc7942_1257	0.48	+1.0
1,280,566	-		Synpcc7942_1257	0.48	+0.2
1,280,567	+		Synpcc7942_1257	0.48	+0.1
1,280,591	+		Synpcc7942_1257	0.49	-1.4
1,280,591	-		Synpcc7942_1257	0.49	+0.5
1,280,596	-		Synpcc7942_1257	0.49	-0.2
1,280,637	-		Synpcc7942_1257	0.52	-0.1
1,280,649	-		Synpcc7942_1257	0.52	-0.7
1,280,663	+		Synpcc7942_1257	0.53	-0.0
1,280,663	+		Synpcc7942_1257	0.53	+0.4
1,280,671	-		Synpcc7942_1257	0.53	-1.0
1,280,671	-		Synpcc7942_1257	0.53	+1.1
1,280,708	-		Synpcc7942_1257	0.55	-0.7
1,280,708	-		Synpcc7942_1257	0.55	-0.9
1,280,715	+		Synpcc7942_1257	0.56	-2.1
1,280,735	+		Synpcc7942_1257	0.57	+0.6
1,280,761	+		Synpcc7942_1257	0.58	+0.6
1,280,779	-		Synpcc7942_1257	0.59	-2.0
1,280,793	+		Synpcc7942_1257	0.60	+0.4
1,280,826	-		Synpcc7942_1257	0.62	+0.2
1,280,828	-		Synpcc7942_1257	0.62	-0.3
1,280,848	-		Synpcc7942_1257	0.63	+0.0
1,280,851	+		Synpcc7942_1257	0.63	-0.7
1,280,853	-		Synpcc7942_1257	0.63	+0.4
1,280,853	-		Synpcc7942_1257	0.63	+1.4
1,280,878	+		Synpcc7942_1257	0.65	-0.0
1,280,930	+		Synpcc7942_1257	0.67	-0.4
1,280,953	+		Synpcc7942_1257	0.69	-0.4
1,280,974	+		Synpcc7942_1257	0.70	+0.8
1,280,979	+		Synpcc7942_1257	0.70	+0.2
1,281,004	+		Synpcc7942_1257	0.71	+1.1
1,281,018	+		Synpcc7942_1257	0.72	+0.0
1,281,026	-		Synpcc7942_1257	0.73	-0.2
1,281,026	-		Synpcc7942_1257	0.73	-3.0
1,281,026	-		Synpcc7942_1257	0.73	+0.4
1,281,040	-		Synpcc7942_1257	0.73	+0.3
1,281,081	+		Synpcc7942_1257	0.76	-0.4
1,281,175	-		Synpcc7942_1257	0.81	-0.7
1,281,199	+		Synpcc7942_1257	0.82	-0.6
1,281,225	+		Synpcc7942_1257	0.83	+0.1
1,281,227	+		Synpcc7942_1257	0.83	+1.5
1,281,238	+		Synpcc7942_1257	0.84	-1.0
1,281,243	+		Synpcc7942_1257	0.84	-0.5
1,281,255	-		Synpcc7942_1257	0.85	-0.2
1,281,271	-		Synpcc7942_1257	0.86	-0.3
1,281,312	+		Synpcc7942_1257	0.88	-0.9
1,281,387	+				-0.3
1,281,410	+				-0.5
1,281,410	+				-0.6
1,281,410	+				-0.7
1,281,435	+				+0.0
1,281,443	-				-1.4
1,281,447	+				+0.6
1,281,455	-				-0.5
1,281,455	-				-1.3
1,281,455	-				-0.5
1,281,469	+				-0.1
1,281,471	+				-1.8
1,281,471	+				+0.0
1,281,485	+				+0.7
1,281,521	+				+0.3
1,281,710	+				+0.5
1,281,718	-		Synpcc7942_1258	0.45	+0.5
1,281,750	-		Synpcc7942_1258	0.53	-0.9
1,281,774	+		Synpcc7942_1258	0.58	-1.5
1,281,774	+		Synpcc7942_1258	0.58	-0.5
1,281,782	-		Synpcc7942_1258	0.60	-0.1
1,281,782	-		Synpcc7942_1258	0.60	+0.2
1,281,782	-		Synpcc7942_1258	0.60	+0.2
1,281,782	-		Synpcc7942_1258	0.60	-0.3
1,281,785	+		Synpcc7942_1258	0.61	-1.0
1,281,793	-		Synpcc7942_1258	0.63	-0.9
1,281,821	+		Synpcc7942_1258	0.70	-0.2
1,281,830	+		Synpcc7942_1258	0.72	+0.9
1,281,831	+		Synpcc7942_1258	0.72	-0.4
1,281,842	+		Synpcc7942_1258	0.75	-1.0
1,281,845	-		Synpcc7942_1258	0.76	+1.2
1,281,906	-				-0.5
1,281,970	+				-3.0
1,281,978	-				-0.1
1,281,983	-				-0.4
1,281,988	-				-0.5
1,281,988	-				-1.2
1,281,989	-				-0.4
1,281,997	-				+0.1
1,282,056	+				-1.4
1,282,064	-				-0.3
1,282,066	+				-2.0
1,282,074	-				-3.7
1,282,074	-				-0.5
1,282,087	-				-1.0
1,282,147	+		Synpcc7942_1259	0.13	-3.0
1,282,147	+		Synpcc7942_1259	0.13	-1.0
1,282,155	-		Synpcc7942_1259	0.14	+0.4
1,282,155	-		Synpcc7942_1259	0.14	-1.7
1,282,171	-		Synpcc7942_1259	0.15	-2.0
1,282,171	-		Synpcc7942_1259	0.15	-0.5
1,282,171	-		Synpcc7942_1259	0.15	-0.1
1,282,173	+		Synpcc7942_1259	0.15	-0.6
1,282,175	+		Synpcc7942_1259	0.15	-0.9
1,282,216	-		Synpcc7942_1259	0.19	-0.5
1,282,330	-		Synpcc7942_1259	0.29	-2.6
1,282,330	-		Synpcc7942_1259	0.29	-3.2
1,282,404	+		Synpcc7942_1259	0.35	-3.0
1,282,412	-		Synpcc7942_1259	0.36	-2.0
1,282,431	+		Synpcc7942_1259	0.37	-1.4
1,282,462	-		Synpcc7942_1259	0.40	-1.3
1,282,465	-		Synpcc7942_1259	0.40	-0.2
1,282,485	-		Synpcc7942_1259	0.42	-0.2
1,282,493	-		Synpcc7942_1259	0.42	-1.2
1,282,495	-		Synpcc7942_1259	0.43	-0.9
1,282,562	+		Synpcc7942_1259	0.48	-1.5
1,282,569	-		Synpcc7942_1259	0.49	-0.7
1,282,584	-		Synpcc7942_1259	0.50	-1.4
1,282,601	+		Synpcc7942_1259	0.52	-1.5
1,282,611	+		Synpcc7942_1259	0.52	-1.3
1,282,685	+		Synpcc7942_1259	0.59	-0.3
1,282,700	+		Synpcc7942_1259	0.60	-2.6
1,282,706	+		Synpcc7942_1259	0.60	-1.4
1,282,708	-		Synpcc7942_1259	0.61	-1.8
1,282,724	-		Synpcc7942_1259	0.62	-1.0
1,282,861	-		Synpcc7942_1259	0.74	-1.4
1,282,903	+		Synpcc7942_1259	0.77	-1.0