Strain Fitness in Pantoea sp. MT58 around IAI47_17835

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,786,856	-				+0.4
3,786,856	-				+0.1
3,786,856	-				-1.0
3,786,856	-				-1.1
3,786,856	-				+1.0
3,786,856	-				+0.2
3,786,896	+				+0.3
3,786,908	+				-2.1
3,786,908	+				+0.9
3,786,909	-				-1.2
3,786,909	-				-2.1
3,786,981	-				+0.3
3,786,981	-				-1.4
3,787,032	+		IAI47_17825	0.13	-1.4
3,787,032	+		IAI47_17825	0.13	+0.0
3,787,032	+		IAI47_17825	0.13	+0.9
3,787,032	+		IAI47_17825	0.13	-0.8
3,787,033	-		IAI47_17825	0.14	-0.5
3,787,033	-		IAI47_17825	0.14	+0.1
3,787,035	+		IAI47_17825	0.14	-0.6
3,787,035	+		IAI47_17825	0.14	-0.0
3,787,035	+		IAI47_17825	0.14	-1.6
3,787,035	+		IAI47_17825	0.14	-2.7
3,787,036	-		IAI47_17825	0.15	+0.8
3,787,036	-		IAI47_17825	0.15	-0.8
3,787,036	-		IAI47_17825	0.15	-1.9
3,787,036	-		IAI47_17825	0.15	-1.2
3,787,036	-		IAI47_17825	0.15	-1.8
3,787,036	-		IAI47_17825	0.15	+3.1
3,787,036	-		IAI47_17825	0.15	-0.8
3,787,036	-		IAI47_17825	0.15	+0.5
3,787,120	+		IAI47_17825	0.40	+1.1
3,787,120	+		IAI47_17825	0.40	+0.2
3,787,121	-		IAI47_17825	0.41	+0.5
3,787,121	-		IAI47_17825	0.41	-0.7
3,787,136	+		IAI47_17825	0.45	+0.3
3,787,136	+		IAI47_17825	0.45	+0.1
3,787,136	+		IAI47_17825	0.45	-0.3
3,787,225	+		IAI47_17825	0.73	-1.7
3,787,287	+				-1.4
3,787,287	+				-2.0
3,787,287	+				-0.3
3,787,287	+				-0.9
3,787,287	+				-0.5
3,787,287	+				-1.4
3,787,288	-				+1.6
3,787,288	-				-0.4
3,787,288	-				-0.4
3,787,295	+				-0.6
3,787,296	-				+1.8
3,787,306	+				-0.4
3,787,306	+				-0.2
3,787,306	+				-1.9
3,787,307	-				-1.0
3,787,307	-				+0.3
3,787,310	-				-1.4
3,787,313	+				-0.4
3,787,313	+				-0.5
3,787,327	+				-1.1
3,787,327	+				-0.9
3,787,327	+				+0.1
3,787,327	+				-2.2
3,787,327	+				+0.3
3,787,327	+				-0.6
3,787,328	-				-1.4
3,787,332	+				-1.5
3,787,333	-				+0.7
3,787,333	-				+0.7
3,787,383	+		IAI47_17830	0.17	-0.4
3,787,383	+		IAI47_17830	0.17	-0.8
3,787,384	-		IAI47_17830	0.17	+1.2
3,787,384	-		IAI47_17830	0.17	-0.7
3,787,384	-		IAI47_17830	0.17	+0.2
3,787,430	-		IAI47_17830	0.28	+1.0
3,787,430	-		IAI47_17830	0.28	-2.5
3,787,444	+		IAI47_17830	0.31	+0.1
3,787,444	+		IAI47_17830	0.31	-0.1
3,787,445	-		IAI47_17830	0.32	-0.3
3,787,461	+		IAI47_17830	0.35	-0.2
3,787,473	+		IAI47_17830	0.38	-1.0
3,787,473	+		IAI47_17830	0.38	-2.0
3,787,474	-		IAI47_17830	0.39	+0.0
3,787,490	+		IAI47_17830	0.42	-0.5
3,787,490	+		IAI47_17830	0.42	-2.5
3,787,491	-		IAI47_17830	0.43	-1.6
3,787,491	-		IAI47_17830	0.43	-0.3
3,787,491	-		IAI47_17830	0.43	-1.0
3,787,491	-		IAI47_17830	0.43	+0.4
3,787,491	-		IAI47_17830	0.43	-2.0
3,787,491	-		IAI47_17830	0.43	+0.3
3,787,502	+		IAI47_17830	0.45	-1.2
3,787,502	+		IAI47_17830	0.45	-1.2
3,787,502	+		IAI47_17830	0.45	-0.3
3,787,503	-		IAI47_17830	0.45	+3.6
3,787,503	-		IAI47_17830	0.45	-1.4
3,787,503	-		IAI47_17830	0.45	-1.0
3,787,503	-		IAI47_17830	0.45	-0.9
3,787,503	-		IAI47_17830	0.45	-0.2
3,787,579	+		IAI47_17830	0.64	-1.6
3,787,579	+		IAI47_17830	0.64	-1.7
3,787,579	+		IAI47_17830	0.64	-1.2
3,787,580	-		IAI47_17830	0.64	-0.7
3,787,580	-		IAI47_17830	0.64	+0.5
3,787,599	+		IAI47_17830	0.68	+0.5
3,787,599	+		IAI47_17830	0.68	-1.0
3,787,599	+		IAI47_17830	0.68	+1.3
3,787,599	+		IAI47_17830	0.68	-1.1
3,787,599	+		IAI47_17830	0.68	-0.3
3,787,599	+		IAI47_17830	0.68	-0.6
3,787,599	+		IAI47_17830	0.68	-0.3
3,787,600	-		IAI47_17830	0.69	-0.2
3,787,600	-		IAI47_17830	0.69	-0.8
3,787,600	-		IAI47_17830	0.69	+0.1
3,787,600	-		IAI47_17830	0.69	-1.5
3,787,600	-		IAI47_17830	0.69	-0.1
3,787,606	+		IAI47_17830	0.70	-0.8
3,787,607	-		IAI47_17830	0.70	+0.4
3,787,607	-		IAI47_17830	0.70	-1.5
3,787,636	-		IAI47_17830	0.77	-1.4
3,787,711	-				-0.8
3,787,711	-				-2.7
3,787,711	-				+0.9
3,787,713	+				-0.8
3,787,713	+				-1.3
3,787,714	-				+0.4
3,787,714	-				+1.6
3,787,714	-				+1.1
3,787,714	-				-0.4
3,787,731	+				-1.8
3,787,731	+				-1.2
3,787,731	+				-0.4
3,787,731	+				+0.7
3,787,731	+				+0.3
3,787,731	+				+1.1
3,787,732	-				+0.6
3,787,732	-				-0.7
3,787,732	-				-1.2
3,787,732	-				-0.5
3,787,732	-				+1.7
3,787,732	-				-1.4
3,787,732	-				+1.0
3,787,732	-				+0.2
3,787,732	-				+0.3
3,787,736	+				-0.7
3,787,736	+				-0.9
3,787,736	+				-0.2
3,787,737	-				-0.2
3,787,737	-				-0.7
3,787,737	-				-0.1
3,787,737	-				-1.2
3,787,737	-				-1.9
3,787,760	+				-0.3
3,787,760	+				-1.0
3,787,760	+				-0.9
3,787,761	-				+0.1
3,787,761	-				+0.2
3,787,786	+				-0.7
3,787,833	-				-0.4
3,787,838	-				+1.5
3,787,854	+				-0.2
3,787,854	+				-2.8
3,787,854	+				+0.7
3,787,854	+				-0.1
3,787,854	+				+0.2
3,787,854	+				-1.2
3,787,854	+				-3.0
3,787,854	+				-0.6
3,787,854	+				+2.0
3,787,855	-				+0.6
3,787,855	-				-1.2
3,787,855	-				-0.1
3,787,855	-				-1.7
3,788,092	+				+3.1
3,789,024	+				+0.7
3,789,052	-				-0.9
3,789,052	-				-0.2
3,789,052	-				-0.7
3,789,088	+				-2.2
3,789,126	+				-0.2
3,789,127	-				-1.5
3,789,212	+		IAI47_17840	0.20	-0.8
3,789,212	+		IAI47_17840	0.20	-0.9
3,789,212	+		IAI47_17840	0.20	-0.7
3,789,261	+		IAI47_17840	0.28	-2.0
3,789,278	+		IAI47_17840	0.31	+0.8
3,789,278	+		IAI47_17840	0.31	+0.9
3,789,279	-		IAI47_17840	0.31	-0.6
3,789,279	-		IAI47_17840	0.31	+1.3
3,789,279	-		IAI47_17840	0.31	+1.9
3,789,302	+		IAI47_17840	0.35	-1.3
3,789,302	+		IAI47_17840	0.35	-0.7
3,789,303	-		IAI47_17840	0.35	+2.8
3,789,312	+		IAI47_17840	0.37	-0.4
3,789,312	+		IAI47_17840	0.37	+0.7
3,789,312	+		IAI47_17840	0.37	-0.7
3,789,312	+		IAI47_17840	0.37	-0.5
3,789,312	+		IAI47_17840	0.37	-1.2
3,789,313	-		IAI47_17840	0.37	-0.3
3,789,313	-		IAI47_17840	0.37	+2.5
3,789,313	-		IAI47_17840	0.37	-1.8
3,789,313	-		IAI47_17840	0.37	+0.3
3,789,313	-		IAI47_17840	0.37	-0.6
3,789,313	-		IAI47_17840	0.37	-0.8
3,789,313	-		IAI47_17840	0.37	+0.6
3,789,313	-		IAI47_17840	0.37	+0.6
3,789,313	-		IAI47_17840	0.37	+1.3
3,789,313	-		IAI47_17840	0.37	+0.1
3,789,313	-		IAI47_17840	0.37	+2.1
3,789,318	+		IAI47_17840	0.38	-0.1
3,789,318	+		IAI47_17840	0.38	-1.4
3,789,318	+		IAI47_17840	0.38	-0.7
3,789,318	+		IAI47_17840	0.38	-0.2
3,789,318	+		IAI47_17840	0.38	-1.1
3,789,319	-		IAI47_17840	0.38	-1.3
3,789,319	-		IAI47_17840	0.38	+3.6
3,789,319	-		IAI47_17840	0.38	+2.6
3,789,320	+		IAI47_17840	0.38	+0.4
3,789,320	+		IAI47_17840	0.38	-1.2
3,789,321	-		IAI47_17840	0.38	+1.4
3,789,321	-		IAI47_17840	0.38	-1.2
3,789,321	-		IAI47_17840	0.38	+2.0
3,789,361	+		IAI47_17840	0.45	-0.7
3,789,361	+		IAI47_17840	0.45	+1.5
3,789,361	+		IAI47_17840	0.45	+0.1
3,789,361	+		IAI47_17840	0.45	-0.2
3,789,361	+		IAI47_17840	0.45	-0.0
3,789,361	+		IAI47_17840	0.45	-0.2
3,789,361	+		IAI47_17840	0.45	-1.9
3,789,361	+		IAI47_17840	0.45	-0.4
3,789,361	+		IAI47_17840	0.45	-2.4
3,789,362	-		IAI47_17840	0.45	+1.0
3,789,362	-		IAI47_17840	0.45	-0.6
3,789,362	-		IAI47_17840	0.45	+0.1
3,789,362	-		IAI47_17840	0.45	+0.2
3,789,362	-		IAI47_17840	0.45	+0.3
3,789,362	-		IAI47_17840	0.45	+0.5
3,789,362	-		IAI47_17840	0.45	-0.4
3,789,371	+		IAI47_17840	0.46	+0.1
3,789,372	-		IAI47_17840	0.46	-1.0
3,789,411	-		IAI47_17840	0.53	-1.2
3,789,446	+		IAI47_17840	0.58	+0.2
3,789,446	+		IAI47_17840	0.58	-1.9
3,789,447	-		IAI47_17840	0.59	-0.8
3,789,452	+		IAI47_17840	0.59	+0.1
3,789,487	+		IAI47_17840	0.65	+1.8
3,789,488	-		IAI47_17840	0.65	-0.5
3,789,541	+		IAI47_17840	0.74	+2.1
3,789,541	+		IAI47_17840	0.74	+1.9
3,789,542	-		IAI47_17840	0.74	-0.9
3,789,542	-		IAI47_17840	0.74	+0.4
3,789,542	-		IAI47_17840	0.74	+0.6
3,789,542	-		IAI47_17840	0.74	-0.8
3,789,602	+		IAI47_17840	0.84	+0.7
3,789,602	+		IAI47_17840	0.84	-0.8
3,789,602	+		IAI47_17840	0.84	+0.3
3,789,602	+		IAI47_17840	0.84	+0.1
3,789,602	+		IAI47_17840	0.84	-2.0
3,789,603	-		IAI47_17840	0.84	+2.0
3,789,603	-		IAI47_17840	0.84	+0.8
3,789,603	-		IAI47_17840	0.84	+0.2
3,789,603	-		IAI47_17840	0.84	+2.4
3,789,696	-				+1.4
3,789,696	-				+1.7
3,789,734	+				-0.2
3,789,808	-				-0.5
3,789,808	-				+2.1
3,789,861	+				-0.1
3,789,861	+				+0.3
3,789,862	-				-1.1
3,789,862	-				-1.9
3,789,869	-				+0.8
3,789,869	-				+0.5
3,789,878	+				-0.4
3,789,890	+				-0.6
3,789,891	-				-0.2
3,789,901	-				+1.4
3,789,901	-				+0.2
3,789,944	+				-0.2
3,790,000	+		IAI47_17845	0.12	-0.9
3,790,000	+		IAI47_17845	0.12	-1.1
3,790,001	-		IAI47_17845	0.12	+0.4
3,790,001	-		IAI47_17845	0.12	-1.0
3,790,001	-		IAI47_17845	0.12	-1.4
3,790,003	+		IAI47_17845	0.12	-0.4
3,790,004	-		IAI47_17845	0.13	-1.8
3,790,045	+		IAI47_17845	0.21	-0.4
3,790,045	+		IAI47_17845	0.21	+0.3
3,790,046	-		IAI47_17845	0.21	-0.4
3,790,046	-		IAI47_17845	0.21	-0.3
3,790,046	-		IAI47_17845	0.21	+0.5