Strain Fitness in Pantoea sp. MT58 around IAI47_15140

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,191,291	+		IAI47_15135	0.32	+0.6
3,191,291	+		IAI47_15135	0.32	+0.2
3,191,292	-		IAI47_15135	0.32	-0.7
3,191,292	-		IAI47_15135	0.32	+1.0
3,191,374	+		IAI47_15135	0.38	+0.8
3,191,374	+		IAI47_15135	0.38	-1.0
3,191,374	+		IAI47_15135	0.38	-0.9
3,191,374	+		IAI47_15135	0.38	-0.6
3,191,469	+		IAI47_15135	0.46	+0.0
3,191,469	+		IAI47_15135	0.46	-0.7
3,191,469	+		IAI47_15135	0.46	+0.9
3,191,469	+		IAI47_15135	0.46	-0.4
3,191,469	+		IAI47_15135	0.46	-0.8
3,191,470	-		IAI47_15135	0.46	+0.0
3,191,470	-		IAI47_15135	0.46	+1.7
3,191,470	-		IAI47_15135	0.46	+0.9
3,191,470	-		IAI47_15135	0.46	+0.8
3,191,470	-		IAI47_15135	0.46	+0.9
3,191,470	-		IAI47_15135	0.46	+0.7
3,191,492	+		IAI47_15135	0.48	+0.5
3,191,492	+		IAI47_15135	0.48	-0.0
3,191,492	+		IAI47_15135	0.48	-0.1
3,191,492	+		IAI47_15135	0.48	+0.2
3,191,492	+		IAI47_15135	0.48	+0.2
3,191,492	+		IAI47_15135	0.48	+1.5
3,191,492	+		IAI47_15135	0.48	-0.6
3,191,492	+		IAI47_15135	0.48	+0.0
3,191,492	+		IAI47_15135	0.48	-0.4
3,191,492	+		IAI47_15135	0.48	-0.3
3,191,493	-		IAI47_15135	0.48	+1.3
3,191,493	-		IAI47_15135	0.48	+0.6
3,191,493	-		IAI47_15135	0.48	+0.5
3,191,493	-		IAI47_15135	0.48	-0.0
3,191,525	-		IAI47_15135	0.51	+0.8
3,191,551	+		IAI47_15135	0.53	+0.7
3,191,552	-		IAI47_15135	0.53	-1.2
3,191,586	+		IAI47_15135	0.55	-1.8
3,191,586	+		IAI47_15135	0.55	-0.7
3,191,587	-		IAI47_15135	0.56	+0.2
3,191,587	-		IAI47_15135	0.56	+0.4
3,191,587	-		IAI47_15135	0.56	-1.0
3,191,587	-		IAI47_15135	0.56	+0.2
3,191,623	-		IAI47_15135	0.58	+1.4
3,191,675	+		IAI47_15135	0.63	+0.4
3,191,676	-		IAI47_15135	0.63	+0.9
3,191,676	-		IAI47_15135	0.63	+0.6
3,191,676	-		IAI47_15135	0.63	+0.6
3,191,725	+		IAI47_15135	0.67	-1.3
3,191,725	+		IAI47_15135	0.67	-2.0
3,191,725	+		IAI47_15135	0.67	-1.8
3,191,725	+		IAI47_15135	0.67	-0.3
3,191,725	+		IAI47_15135	0.67	+0.8
3,191,725	+		IAI47_15135	0.67	+1.7
3,191,725	+		IAI47_15135	0.67	-1.4
3,191,725	+		IAI47_15135	0.67	-2.9
3,191,725	+		IAI47_15135	0.67	+1.8
3,191,725	+		IAI47_15135	0.67	+0.3
3,191,725	+		IAI47_15135	0.67	-0.1
3,191,726	-		IAI47_15135	0.67	+1.0
3,191,726	-		IAI47_15135	0.67	+0.2
3,191,726	-		IAI47_15135	0.67	-0.9
3,191,726	-		IAI47_15135	0.67	-0.3
3,191,726	-		IAI47_15135	0.67	+0.8
3,191,726	-		IAI47_15135	0.67	-0.2
3,191,726	-		IAI47_15135	0.67	-0.1
3,191,726	-		IAI47_15135	0.67	+0.4
3,191,726	-		IAI47_15135	0.67	-1.0
3,191,726	-		IAI47_15135	0.67	-0.4
3,191,727	+		IAI47_15135	0.67	+0.2
3,191,727	+		IAI47_15135	0.67	-0.3
3,191,727	+		IAI47_15135	0.67	+0.0
3,191,727	+		IAI47_15135	0.67	+0.8
3,191,727	+		IAI47_15135	0.67	-1.1
3,191,727	+		IAI47_15135	0.67	-0.0
3,191,728	-		IAI47_15135	0.67	-2.0
3,191,728	-		IAI47_15135	0.67	-2.4
3,191,728	-		IAI47_15135	0.67	+0.4
3,191,728	-		IAI47_15135	0.67	-1.5
3,191,729	+		IAI47_15135	0.67	-0.3
3,191,729	+		IAI47_15135	0.67	-2.1
3,191,729	+		IAI47_15135	0.67	+0.0
3,191,729	+		IAI47_15135	0.67	+0.9
3,191,729	+		IAI47_15135	0.67	+0.0
3,191,730	-		IAI47_15135	0.67	+0.3
3,191,730	-		IAI47_15135	0.67	-0.7
3,191,730	-		IAI47_15135	0.67	+0.2
3,191,730	-		IAI47_15135	0.67	+0.0
3,191,730	-		IAI47_15135	0.67	-0.7
3,191,730	-		IAI47_15135	0.67	+0.7
3,191,735	+		IAI47_15135	0.67	-1.0
3,191,735	+		IAI47_15135	0.67	-0.6
3,191,736	-		IAI47_15135	0.67	+0.9
3,191,736	-		IAI47_15135	0.67	+0.1
3,191,748	+		IAI47_15135	0.68	+1.3
3,191,748	+		IAI47_15135	0.68	-1.2
3,191,748	+		IAI47_15135	0.68	-1.6
3,191,749	-		IAI47_15135	0.69	+0.0
3,191,749	-		IAI47_15135	0.69	+0.3
3,191,750	+		IAI47_15135	0.69	+0.4
3,191,751	-		IAI47_15135	0.69	-1.3
3,191,751	-		IAI47_15135	0.69	+0.6
3,191,751	-		IAI47_15135	0.69	+1.0
3,191,767	+		IAI47_15135	0.70	-1.0
3,191,768	-		IAI47_15135	0.70	-0.1
3,191,768	-		IAI47_15135	0.70	-0.3
3,191,768	-		IAI47_15135	0.70	-0.8
3,191,768	-		IAI47_15135	0.70	+0.9
3,191,838	+		IAI47_15135	0.76	-0.8
3,191,838	+		IAI47_15135	0.76	-1.1
3,191,838	+		IAI47_15135	0.76	-1.4
3,191,839	-		IAI47_15135	0.76	+0.2
3,191,839	-		IAI47_15135	0.76	+0.1
3,191,839	-		IAI47_15135	0.76	+0.8
3,191,839	-		IAI47_15135	0.76	+0.4
3,191,839	-		IAI47_15135	0.76	+0.3
3,191,904	+		IAI47_15135	0.81	-1.4
3,191,904	+		IAI47_15135	0.81	-1.3
3,191,904	+		IAI47_15135	0.81	+0.5
3,191,904	+		IAI47_15135	0.81	+0.4
3,191,904	+		IAI47_15135	0.81	-0.5
3,191,904	+		IAI47_15135	0.81	+0.5
3,191,905	-		IAI47_15135	0.81	-0.0
3,191,905	-		IAI47_15135	0.81	+2.2
3,191,905	-		IAI47_15135	0.81	-0.9
3,191,905	-		IAI47_15135	0.81	+1.0
3,191,905	-		IAI47_15135	0.81	+1.5
3,191,928	+		IAI47_15135	0.83	-1.6
3,191,928	+		IAI47_15135	0.83	-0.7
3,191,928	+		IAI47_15135	0.83	-1.3
3,191,929	-		IAI47_15135	0.83	+0.4
3,191,929	-		IAI47_15135	0.83	+0.6
3,191,929	-		IAI47_15135	0.83	-1.5
3,191,929	-		IAI47_15135	0.83	+0.8
3,191,929	-		IAI47_15135	0.83	-1.0
3,191,929	-		IAI47_15135	0.83	+0.3
3,191,929	-		IAI47_15135	0.83	+0.6
3,191,988	+		IAI47_15135	0.88	+0.4
3,191,988	+		IAI47_15135	0.88	+0.3
3,191,988	+		IAI47_15135	0.88	-0.7
3,191,989	-		IAI47_15135	0.88	+0.2
3,191,989	-		IAI47_15135	0.88	-0.2
3,191,989	-		IAI47_15135	0.88	-1.0
3,192,002	+		IAI47_15135	0.89	+0.9
3,192,096	+				-1.7
3,192,096	+				+1.0
3,192,097	-				+2.4
3,192,097	-				+2.5
3,192,097	-				-0.5
3,192,112	+				-0.1
3,192,112	+				+0.4
3,192,112	+				-0.3
3,192,112	+				-1.4
3,192,112	+				+1.1
3,192,112	+				-0.4
3,192,113	-				+0.8
3,192,113	-				-2.0
3,192,113	-				+1.3
3,192,113	-				+2.1
3,192,141	+				-0.7
3,192,141	+				-0.8
3,192,141	+				+0.1
3,192,142	-				-0.5
3,192,142	-				-0.4
3,192,142	-				-1.0
3,192,174	+				+0.8
3,192,175	-				+0.5
3,192,175	-				-0.3
3,192,175	-				+2.1
3,192,175	-				+1.6
3,192,175	-				-0.6
3,192,175	-				+0.9
3,192,180	+				-0.4
3,192,180	+				+0.3
3,192,180	+				-1.8
3,192,181	-				-0.9
3,192,181	-				+0.7
3,192,181	-				-1.9
3,192,181	-				+0.4
3,192,181	-				-0.1
3,192,181	-				-1.5
3,192,181	-				-0.7
3,192,181	-				-0.1
3,192,185	+				-1.2
3,192,186	-				-2.3
3,192,186	-				+0.4
3,192,249	+				-1.0
3,192,249	+				-0.1
3,192,249	+				-0.1
3,192,249	+				-1.3
3,192,249	+				-1.4
3,192,249	+				+0.9
3,192,249	+				-1.2
3,192,249	+				-0.7
3,192,249	+				+2.5
3,192,249	+				+1.2
3,192,249	+				-0.1
3,192,249	+				+0.0
3,192,249	+				-1.1
3,192,250	-				+1.2
3,192,250	-				+1.0
3,192,250	-				+2.2
3,192,250	-				+0.3
3,192,250	-				-1.1
3,192,250	-				+0.9
3,192,250	-				+0.9
3,192,250	-				-0.5
3,192,250	-				+1.2
3,192,250	-				-2.0
3,192,250	-				-0.1
3,192,250	-				+1.4
3,192,251	+				+0.2
3,192,251	+				-0.5
3,192,251	+				+0.0
3,192,251	+				-0.2
3,192,252	-				-1.1
3,192,252	-				+1.9
3,192,267	-				-0.7
3,192,280	+				+1.5
3,192,280	+				-2.0
3,192,281	-				+3.4
3,192,282	+				+0.4
3,192,282	+				+0.4
3,192,282	+				-1.8
3,192,283	-				-1.2
3,192,283	-				+0.8
3,192,283	-				-0.0
3,192,283	-				+0.6
3,192,283	-				-0.1
3,192,283	-				+4.0
3,192,283	-				+1.0
3,192,283	-				+1.8
3,192,283	-				+1.0
3,192,296	-				+0.9
3,192,320	-		IAI47_15140	0.14	+2.2
3,192,342	+		IAI47_15140	0.19	-0.4
3,192,342	+		IAI47_15140	0.19	-0.8
3,192,342	+		IAI47_15140	0.19	+0.3
3,192,342	+		IAI47_15140	0.19	+0.5
3,192,342	+		IAI47_15140	0.19	+0.3
3,192,342	+		IAI47_15140	0.19	+0.6
3,192,342	+		IAI47_15140	0.19	-1.3
3,192,342	+		IAI47_15140	0.19	+0.4
3,192,342	+		IAI47_15140	0.19	-0.1
3,192,343	-		IAI47_15140	0.19	+4.6
3,192,343	-		IAI47_15140	0.19	+3.3
3,192,343	-		IAI47_15140	0.19	+2.8
3,192,343	-		IAI47_15140	0.19	+2.0
3,192,343	-		IAI47_15140	0.19	+2.2
3,192,405	+		IAI47_15140	0.32	-2.0
3,192,406	-		IAI47_15140	0.32	+0.2
3,192,458	+		IAI47_15140	0.44	+0.3
3,192,459	-		IAI47_15140	0.44	-1.7
3,192,464	-		IAI47_15140	0.45	-0.7
3,192,528	+		IAI47_15140	0.59	+0.0
3,192,528	+		IAI47_15140	0.59	+0.1
3,192,529	-		IAI47_15140	0.59	+0.9
3,192,529	-		IAI47_15140	0.59	+1.8
3,192,529	-		IAI47_15140	0.59	+1.4
3,192,563	-		IAI47_15140	0.67	+1.6
3,192,694	+				+1.3
3,192,694	+				-2.1
3,192,694	+				-1.1
3,192,694	+				-0.8
3,192,694	+				-1.6
3,192,695	-				+0.3
3,192,695	-				+1.8
3,192,702	+				+0.3
3,192,715	+				+0.7
3,192,716	-				+1.0
3,192,716	-				+1.1
3,192,716	-				+1.1
3,192,716	-				+2.5
3,192,719	+				-1.6
3,192,719	+				-0.4
3,192,720	-				+1.6
3,192,781	+				+0.6
3,192,781	+				-0.1
3,192,781	+				+0.2
3,192,781	+				+1.0
3,192,782	-				+0.5
3,192,782	-				+2.2
3,192,782	-				-0.1
3,192,782	-				-0.2
3,192,782	-				+0.5
3,192,783	+				-1.7
3,192,783	+				-0.8
3,192,783	+				+3.6
3,192,783	+				-0.1
3,192,783	+				+1.0
3,192,783	+				-0.8
3,192,784	-				-0.8
3,192,784	-				-1.3
3,192,834	+				+0.9
3,192,834	+				+2.0
3,192,834	+				+2.1
3,192,835	-				+0.7
3,192,871	+				-0.6
3,192,871	+				+0.3
3,193,010	+				+0.5
3,193,019	+				+0.1
3,193,020	-				+0.7
3,193,020	-				-1.2
3,193,031	+				+1.4
3,193,031	+				-0.1
3,193,032	-				+0.8
3,193,032	-				+0.9
3,193,032	-				-1.0
3,193,071	+				+1.0
3,193,071	+				+0.9
3,193,071	+				-0.8
3,193,071	+				+1.0
3,193,072	-				-0.8
3,193,072	-				+0.1
3,193,072	-				+2.7
3,193,072	-				-1.0
3,193,072	-				-1.6
3,193,088	+				+0.8
3,193,143	-		IAI47_15145	0.12	-1.1
3,193,143	-		IAI47_15145	0.12	-0.1
3,193,202	+		IAI47_15145	0.16	-0.8
3,193,220	+		IAI47_15145	0.17	+0.1
3,193,253	+		IAI47_15145	0.19	+0.3
3,193,253	+		IAI47_15145	0.19	+1.7
3,193,254	-		IAI47_15145	0.20	-0.5
3,193,497	+		IAI47_15145	0.36	+0.4
3,193,497	+		IAI47_15145	0.36	+2.3
3,193,497	+		IAI47_15145	0.36	-0.6
3,193,497	+		IAI47_15145	0.36	+1.1
3,193,497	+		IAI47_15145	0.36	+1.4
3,193,497	+		IAI47_15145	0.36	+0.7
3,193,497	+		IAI47_15145	0.36	+0.7
3,193,498	-		IAI47_15145	0.36	-0.5
3,193,498	-		IAI47_15145	0.36	-2.1
3,193,498	-		IAI47_15145	0.36	-0.7
3,193,498	-		IAI47_15145	0.36	-1.7
3,193,498	-		IAI47_15145	0.36	-0.7
3,193,499	+		IAI47_15145	0.36	-0.0
3,193,499	+		IAI47_15145	0.36	+1.2
3,193,500	-		IAI47_15145	0.36	+0.8
3,193,625	+		IAI47_15145	0.45	-0.3
3,193,629	+		IAI47_15145	0.45	-0.2
3,193,631	+		IAI47_15145	0.45	+3.1