Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_14010 and IAI47_14015 are separated by 92 nucleotides IAI47_14015 and IAI47_14020 are separated by 3 nucleotides IAI47_14020 and IAI47_14025 are separated by 34 nucleotides IAI47_14025 and IAI47_14030 are separated by 8 nucleotides
IAI47_14010: IAI47_14010 - nicotinate-nucleotide adenylyltransferase, at 2,961,625 to 2,962,269
_14010
IAI47_14015: IAI47_14015 - ribosome silencing factor, at 2,962,362 to 2,962,679
_14015
IAI47_14020: IAI47_14020 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH, at 2,962,683 to 2,963,153
_14020
IAI47_14025: IAI47_14025 - peptidoglycan DD-transpeptidase MrdA, at 2,963,188 to 2,965,092
_14025
IAI47_14030: IAI47_14030 - peptidoglycan glycosyltransferase MrdB, at 2,965,101 to 2,966,213
_14030
Position (kb)
2963
2964
2965
2966 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2962.258 kb on + strand at 2962.259 kb on - strand at 2962.259 kb on - strand at 2962.259 kb on - strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.281 kb on + strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.282 kb on - strand at 2962.283 kb on + strand at 2962.283 kb on + strand at 2962.323 kb on - strand at 2962.337 kb on - strand at 2962.339 kb on + strand at 2962.339 kb on + strand at 2962.340 kb on - strand at 2962.370 kb on + strand at 2962.370 kb on + strand at 2962.370 kb on + strand at 2962.370 kb on + strand at 2962.370 kb on + strand at 2962.370 kb on + strand at 2962.412 kb on + strand, within IAI47_14015 at 2962.412 kb on + strand, within IAI47_14015 at 2962.412 kb on + strand, within IAI47_14015 at 2962.412 kb on + strand, within IAI47_14015 at 2962.412 kb on + strand, within IAI47_14015 at 2962.412 kb on + strand, within IAI47_14015 at 2962.412 kb on + strand, within IAI47_14015 at 2962.430 kb on + strand, within IAI47_14015 at 2962.430 kb on + strand, within IAI47_14015 at 2962.430 kb on + strand, within IAI47_14015 at 2962.430 kb on + strand, within IAI47_14015 at 2962.430 kb on + strand, within IAI47_14015 at 2962.467 kb on + strand, within IAI47_14015 at 2962.467 kb on + strand, within IAI47_14015 at 2962.467 kb on + strand, within IAI47_14015 at 2962.487 kb on + strand, within IAI47_14015 at 2962.543 kb on + strand, within IAI47_14015 at 2962.574 kb on + strand, within IAI47_14015 at 2962.574 kb on + strand, within IAI47_14015 at 2962.574 kb on + strand, within IAI47_14015 at 2962.653 kb on + strand at 2962.653 kb on + strand at 2962.653 kb on + strand at 2962.653 kb on + strand at 2962.653 kb on + strand at 2962.653 kb on + strand at 2962.653 kb on + strand at 2962.653 kb on + strand at 2962.742 kb on + strand, within IAI47_14020 at 2962.742 kb on + strand, within IAI47_14020 at 2962.749 kb on + strand, within IAI47_14020 at 2962.749 kb on + strand, within IAI47_14020 at 2962.772 kb on + strand, within IAI47_14020 at 2962.772 kb on + strand, within IAI47_14020 at 2962.772 kb on + strand, within IAI47_14020 at 2962.814 kb on + strand, within IAI47_14020 at 2962.826 kb on + strand, within IAI47_14020 at 2962.883 kb on + strand, within IAI47_14020 at 2962.904 kb on + strand, within IAI47_14020 at 2963.021 kb on + strand, within IAI47_14020 at 2963.120 kb on + strand at 2963.120 kb on + strand at 2963.120 kb on + strand at 2963.139 kb on + strand at 2963.139 kb on + strand at 2963.182 kb on + strand at 2963.182 kb on + strand at 2963.182 kb on + strand at 2965.023 kb on + strand at 2965.023 kb on + strand at 2965.023 kb on + strand at 2965.023 kb on + strand at 2965.023 kb on + strand at 2965.023 kb on + strand at 2965.023 kb on + strand at 2965.023 kb on + strand at 2965.023 kb on + strand at 2965.023 kb on + strand at 2965.035 kb on + strand at 2965.035 kb on + strand at 2965.041 kb on + strand at 2965.041 kb on + strand at 2965.041 kb on + strand at 2965.041 kb on + strand at 2965.090 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 2,962,258 + -0.1 2,962,259 - -0.2 2,962,259 - +1.1 2,962,259 - +0.2 2,962,281 + +0.8 2,962,281 + +2.4 2,962,281 + -2.1 2,962,281 + -2.1 2,962,281 + -0.8 2,962,281 + +0.9 2,962,281 + +0.5 2,962,281 + +0.4 2,962,281 + -1.4 2,962,281 + -0.7 2,962,281 + +0.5 2,962,281 + -0.3 2,962,281 + +0.8 2,962,281 + -0.4 2,962,281 + +1.1 2,962,281 + +0.3 2,962,281 + -0.6 2,962,281 + -0.6 2,962,281 + -0.5 2,962,282 - -1.1 2,962,282 - -0.0 2,962,282 - +1.0 2,962,282 - +1.1 2,962,282 - -0.5 2,962,282 - -1.3 2,962,282 - -1.3 2,962,282 - -1.8 2,962,282 - -0.7 2,962,282 - -1.1 2,962,282 - +0.3 2,962,282 - +0.2 2,962,282 - -0.6 2,962,282 - +0.8 2,962,282 - +1.6 2,962,282 - +1.1 2,962,282 - -0.9 2,962,282 - +0.6 2,962,282 - +0.4 2,962,283 + -0.4 2,962,283 + +0.6 2,962,323 - +0.5 2,962,337 - -0.7 2,962,339 + -1.2 2,962,339 + -0.7 2,962,340 - -0.8 2,962,370 + +1.0 2,962,370 + -0.5 2,962,370 + +0.6 2,962,370 + +1.1 2,962,370 + +0.4 2,962,370 + -0.6 2,962,412 + IAI47_14015 0.16 -1.0 2,962,412 + IAI47_14015 0.16 +0.7 2,962,412 + IAI47_14015 0.16 +1.4 2,962,412 + IAI47_14015 0.16 +0.3 2,962,412 + IAI47_14015 0.16 +0.2 2,962,412 + IAI47_14015 0.16 +2.0 2,962,412 + IAI47_14015 0.16 +0.3 2,962,430 + IAI47_14015 0.21 -0.3 2,962,430 + IAI47_14015 0.21 -0.5 2,962,430 + IAI47_14015 0.21 +1.7 2,962,430 + IAI47_14015 0.21 +0.5 2,962,430 + IAI47_14015 0.21 +1.5 2,962,467 + IAI47_14015 0.33 -0.2 2,962,467 + IAI47_14015 0.33 +2.8 2,962,467 + IAI47_14015 0.33 +0.6 2,962,487 + IAI47_14015 0.39 +3.8 2,962,543 + IAI47_14015 0.57 +0.2 2,962,574 + IAI47_14015 0.67 +1.6 2,962,574 + IAI47_14015 0.67 +2.9 2,962,574 + IAI47_14015 0.67 +2.2 2,962,653 + +1.4 2,962,653 + +0.3 2,962,653 + +0.3 2,962,653 + -0.1 2,962,653 + +1.1 2,962,653 + -1.5 2,962,653 + -0.2 2,962,653 + -0.2 2,962,742 + IAI47_14020 0.13 +0.1 2,962,742 + IAI47_14020 0.13 +1.3 2,962,749 + IAI47_14020 0.14 +1.8 2,962,749 + IAI47_14020 0.14 -0.3 2,962,772 + IAI47_14020 0.19 +1.5 2,962,772 + IAI47_14020 0.19 -1.3 2,962,772 + IAI47_14020 0.19 +1.4 2,962,814 + IAI47_14020 0.28 +4.1 2,962,826 + IAI47_14020 0.30 +1.1 2,962,883 + IAI47_14020 0.42 +0.1 2,962,904 + IAI47_14020 0.47 +1.8 2,963,021 + IAI47_14020 0.72 +0.2 2,963,120 + -0.5 2,963,120 + +1.3 2,963,120 + +0.5 2,963,139 + +1.4 2,963,139 + +1.7 2,963,182 + +0.1 2,963,182 + +0.6 2,963,182 + +0.2 2,965,023 + -0.7 2,965,023 + -2.1 2,965,023 + +1.9 2,965,023 + -0.1 2,965,023 + -0.4 2,965,023 + -0.4 2,965,023 + +1.0 2,965,023 + +1.7 2,965,023 + +0.4 2,965,023 + +1.1 2,965,035 + +0.3 2,965,035 + +0.1 2,965,041 + -0.8 2,965,041 + -0.4 2,965,041 + +0.4 2,965,041 + -0.4 2,965,090 + +1.1
Or see this region's nucleotide sequence