Strain Fitness in Pantoea sp. MT58 around IAI47_13620

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,886,530	+		IAI47_13610	0.24	+0.3
2,886,530	+		IAI47_13610	0.24	+0.7
2,886,530	+		IAI47_13610	0.24	+0.3
2,886,530	+		IAI47_13610	0.24	+1.5
2,886,531	-		IAI47_13610	0.25	-1.1
2,886,531	-		IAI47_13610	0.25	-1.9
2,886,531	-		IAI47_13610	0.25	+1.8
2,886,531	-		IAI47_13610	0.25	-0.4
2,886,536	+		IAI47_13610	0.26	-1.8
2,886,537	-		IAI47_13610	0.26	-0.7
2,886,537	-		IAI47_13610	0.26	-0.2
2,886,537	-		IAI47_13610	0.26	-0.5
2,886,537	-		IAI47_13610	0.26	+0.2
2,886,612	-		IAI47_13610	0.47	-0.0
2,886,612	-		IAI47_13610	0.47	-1.3
2,886,620	+		IAI47_13610	0.49	+0.0
2,886,638	+		IAI47_13610	0.54	+0.5
2,886,638	+		IAI47_13610	0.54	+1.8
2,886,638	+		IAI47_13610	0.54	-0.2
2,886,639	-		IAI47_13610	0.54	+0.6
2,886,639	-		IAI47_13610	0.54	-1.6
2,886,639	-		IAI47_13610	0.54	+1.0
2,886,639	-		IAI47_13610	0.54	-0.0
2,886,639	-		IAI47_13610	0.54	+1.2
2,886,639	-		IAI47_13610	0.54	-0.9
2,886,639	-		IAI47_13610	0.54	-0.9
2,886,674	+		IAI47_13610	0.64	+0.8
2,886,674	+		IAI47_13610	0.64	+1.4
2,886,674	+		IAI47_13610	0.64	+0.3
2,886,674	+		IAI47_13610	0.64	+0.6
2,886,674	+		IAI47_13610	0.64	-0.2
2,886,675	-		IAI47_13610	0.64	+0.7
2,886,675	-		IAI47_13610	0.64	-0.6
2,886,675	-		IAI47_13610	0.64	-0.1
2,886,675	-		IAI47_13610	0.64	+0.2
2,886,675	-		IAI47_13610	0.64	+1.6
2,886,675	-		IAI47_13610	0.64	+0.9
2,886,675	-		IAI47_13610	0.64	+1.2
2,886,677	+		IAI47_13610	0.64	-0.7
2,886,677	+		IAI47_13610	0.64	+0.7
2,886,677	+		IAI47_13610	0.64	+0.4
2,886,677	+		IAI47_13610	0.64	+0.4
2,886,677	+		IAI47_13610	0.64	-1.2
2,886,677	+		IAI47_13610	0.64	+1.8
2,886,677	+		IAI47_13610	0.64	-0.4
2,886,677	+		IAI47_13610	0.64	-1.2
2,886,677	+		IAI47_13610	0.64	+0.6
2,886,677	+		IAI47_13610	0.64	+1.1
2,886,677	+		IAI47_13610	0.64	+0.1
2,886,677	+		IAI47_13610	0.64	-1.4
2,886,678	-		IAI47_13610	0.65	-0.7
2,886,678	-		IAI47_13610	0.65	-1.6
2,886,678	-		IAI47_13610	0.65	-0.5
2,886,678	-		IAI47_13610	0.65	-0.1
2,886,713	+		IAI47_13610	0.74	+0.7
2,886,713	+		IAI47_13610	0.74	+2.1
2,886,713	+		IAI47_13610	0.74	-0.3
2,886,713	+		IAI47_13610	0.74	+0.2
2,886,713	+		IAI47_13610	0.74	-0.2
2,886,714	-		IAI47_13610	0.75	-0.1
2,886,714	-		IAI47_13610	0.75	+0.5
2,886,714	-		IAI47_13610	0.75	+0.6
2,886,714	-		IAI47_13610	0.75	+0.3
2,886,714	-		IAI47_13610	0.75	+1.8
2,886,738	-		IAI47_13610	0.81	+0.6
2,886,738	-		IAI47_13610	0.81	+2.2
2,886,741	-		IAI47_13610	0.82	-0.4
2,886,755	+		IAI47_13610	0.86	-0.4
2,886,755	+		IAI47_13610	0.86	-1.0
2,886,755	+		IAI47_13610	0.86	+0.1
2,886,756	-		IAI47_13610	0.86	-1.0
2,886,756	-		IAI47_13610	0.86	+0.7
2,886,756	-		IAI47_13610	0.86	-0.9
2,886,756	-		IAI47_13610	0.86	-0.1
2,886,775	+				+1.1
2,886,775	+				-1.4
2,886,775	+				-0.1
2,886,775	+				+0.6
2,886,775	+				-0.4
2,886,775	+				-0.1
2,886,775	+				-0.8
2,886,776	-				+0.1
2,886,776	-				+0.6
2,886,776	-				-1.4
2,886,776	-				+0.1
2,886,776	-				-1.6
2,886,779	+				-0.9
2,886,779	+				+1.3
2,886,780	-				+0.8
2,886,780	-				-0.4
2,886,780	-				+0.1
2,886,804	+				-0.4
2,886,804	+				+0.6
2,886,814	+				-0.1
2,886,871	-				-1.2
2,886,871	-				+0.6
2,886,875	+				+0.3
2,886,875	+				-0.3
2,886,875	+				+2.6
2,886,875	+				-0.7
2,886,876	-				-1.2
2,886,876	-				-1.8
2,886,876	-				-2.1
2,886,876	-				-1.0
2,886,979	+		IAI47_13615	0.13	+0.6
2,886,979	+		IAI47_13615	0.13	+0.4
2,886,979	+		IAI47_13615	0.13	+0.1
2,886,979	+		IAI47_13615	0.13	+1.0
2,886,979	+		IAI47_13615	0.13	-0.2
2,886,980	-		IAI47_13615	0.13	+1.0
2,887,052	-		IAI47_13615	0.25	-1.2
2,887,078	+		IAI47_13615	0.30	+0.8
2,887,079	-		IAI47_13615	0.30	+1.3
2,887,142	+		IAI47_13615	0.41	-0.5
2,887,142	+		IAI47_13615	0.41	+0.8
2,887,143	-		IAI47_13615	0.41	+0.2
2,887,166	+		IAI47_13615	0.45	+0.3
2,887,166	+		IAI47_13615	0.45	+0.5
2,887,166	+		IAI47_13615	0.45	-0.8
2,887,166	+		IAI47_13615	0.45	+0.6
2,887,166	+		IAI47_13615	0.45	-0.1
2,887,167	-		IAI47_13615	0.45	+1.1
2,887,167	-		IAI47_13615	0.45	-1.6
2,887,167	-		IAI47_13615	0.45	-0.5
2,887,167	-		IAI47_13615	0.45	+0.8
2,887,167	-		IAI47_13615	0.45	+1.1
2,887,167	-		IAI47_13615	0.45	-0.2
2,887,202	+		IAI47_13615	0.51	-1.0
2,887,202	+		IAI47_13615	0.51	+0.4
2,887,202	+		IAI47_13615	0.51	-0.3
2,887,203	-		IAI47_13615	0.51	-0.3
2,887,203	-		IAI47_13615	0.51	+0.6
2,887,203	-		IAI47_13615	0.51	-1.8
2,887,203	-		IAI47_13615	0.51	-0.9
2,887,222	+		IAI47_13615	0.54	-1.4
2,887,222	+		IAI47_13615	0.54	-0.4
2,887,222	+		IAI47_13615	0.54	-0.7
2,887,223	-		IAI47_13615	0.55	-0.8
2,887,338	+		IAI47_13615	0.74	+0.3
2,887,339	-		IAI47_13615	0.75	+0.5
2,887,357	+		IAI47_13615	0.78	+0.9
2,887,357	+		IAI47_13615	0.78	-1.1
2,887,357	+		IAI47_13615	0.78	-1.1
2,887,358	-		IAI47_13615	0.78	-0.0
2,887,393	+		IAI47_13615	0.84	-0.2
2,887,393	+		IAI47_13615	0.84	+2.3
2,887,411	+		IAI47_13615	0.87	+1.2
2,887,412	-		IAI47_13615	0.87	-1.3
2,887,421	-		IAI47_13615	0.89	+1.1
2,887,452	+				+0.3
2,887,453	-				-0.5
2,887,453	-				-0.5
2,887,453	-				+0.6
2,887,675	+				+0.2
2,887,675	+				-0.2
2,887,675	+				-1.9
2,887,675	+				+0.8
2,887,848	+		IAI47_13620	0.12	+0.3
2,887,849	-		IAI47_13620	0.12	+0.1
2,887,855	+		IAI47_13620	0.13	-1.1
2,887,856	-		IAI47_13620	0.13	+1.1
2,887,856	-		IAI47_13620	0.13	+0.6
2,887,912	-		IAI47_13620	0.14	-0.7
2,887,999	+		IAI47_13620	0.17	+0.2
2,887,999	+		IAI47_13620	0.17	+0.6
2,888,023	+		IAI47_13620	0.18	+0.1
2,888,023	+		IAI47_13620	0.18	+2.5
2,888,024	-		IAI47_13620	0.18	-0.1
2,888,024	-		IAI47_13620	0.18	-1.3
2,888,024	-		IAI47_13620	0.18	+0.0
2,888,050	+		IAI47_13620	0.19	-0.9
2,888,050	+		IAI47_13620	0.19	-1.6
2,888,050	+		IAI47_13620	0.19	+0.2
2,888,050	+		IAI47_13620	0.19	-0.0
2,888,050	+		IAI47_13620	0.19	+1.9
2,888,050	+		IAI47_13620	0.19	-2.0
2,888,050	+		IAI47_13620	0.19	-0.5
2,888,050	+		IAI47_13620	0.19	+0.6
2,888,050	+		IAI47_13620	0.19	+0.8
2,888,051	-		IAI47_13620	0.19	-0.2
2,888,051	-		IAI47_13620	0.19	+1.3
2,888,051	-		IAI47_13620	0.19	-1.3
2,888,051	-		IAI47_13620	0.19	+0.6
2,888,088	-		IAI47_13620	0.20	-1.1
2,888,113	+		IAI47_13620	0.21	+0.7
2,888,114	-		IAI47_13620	0.21	+0.5
2,888,114	-		IAI47_13620	0.21	+0.2
2,888,114	-		IAI47_13620	0.21	-0.0
2,888,181	+		IAI47_13620	0.23	+0.5
2,888,181	+		IAI47_13620	0.23	+1.0
2,888,182	-		IAI47_13620	0.23	+0.1
2,888,182	-		IAI47_13620	0.23	+0.3
2,888,182	-		IAI47_13620	0.23	+1.4
2,888,182	-		IAI47_13620	0.23	-0.5
2,888,194	-		IAI47_13620	0.23	-0.7
2,888,237	+		IAI47_13620	0.25	-2.7
2,888,238	-		IAI47_13620	0.25	-0.9
2,888,256	+		IAI47_13620	0.26	-1.4
2,888,337	+		IAI47_13620	0.28	+1.2
2,888,337	+		IAI47_13620	0.28	-0.3
2,888,338	-		IAI47_13620	0.28	+0.2
2,888,338	-		IAI47_13620	0.28	-1.7
2,888,338	-		IAI47_13620	0.28	+1.2
2,888,341	+		IAI47_13620	0.28	-1.4
2,888,341	+		IAI47_13620	0.28	-0.4
2,888,341	+		IAI47_13620	0.28	-0.6
2,888,342	-		IAI47_13620	0.28	+1.0
2,888,362	+		IAI47_13620	0.29	-0.6
2,888,362	+		IAI47_13620	0.29	+0.9
2,888,362	+		IAI47_13620	0.29	+1.0
2,888,362	+		IAI47_13620	0.29	+0.5
2,888,362	+		IAI47_13620	0.29	+0.3
2,888,362	+		IAI47_13620	0.29	-0.9
2,888,363	-		IAI47_13620	0.29	+1.1
2,888,374	+		IAI47_13620	0.29	-0.2
2,888,405	-		IAI47_13620	0.30	+0.2
2,888,462	+		IAI47_13620	0.32	+0.9
2,888,559	+		IAI47_13620	0.35	-0.6
2,888,596	+		IAI47_13620	0.37	-1.2
2,888,596	+		IAI47_13620	0.37	-0.6
2,888,596	+		IAI47_13620	0.37	-1.1
2,888,596	+		IAI47_13620	0.37	-0.9
2,888,596	+		IAI47_13620	0.37	-0.6
2,888,596	+		IAI47_13620	0.37	-1.7
2,888,596	+		IAI47_13620	0.37	+0.4
2,888,596	+		IAI47_13620	0.37	+1.4
2,888,597	-		IAI47_13620	0.37	+0.8
2,888,597	-		IAI47_13620	0.37	-0.6
2,888,597	-		IAI47_13620	0.37	+0.4
2,888,597	-		IAI47_13620	0.37	+0.7
2,888,597	-		IAI47_13620	0.37	+0.6
2,888,597	-		IAI47_13620	0.37	+0.2
2,888,597	-		IAI47_13620	0.37	+2.6
2,888,597	-		IAI47_13620	0.37	+2.1
2,888,597	-		IAI47_13620	0.37	+1.2
2,888,597	-		IAI47_13620	0.37	+0.4
2,888,597	-		IAI47_13620	0.37	+1.5
2,888,597	-		IAI47_13620	0.37	+0.5
2,888,597	-		IAI47_13620	0.37	+0.7
2,888,601	+		IAI47_13620	0.37	-0.7
2,888,601	+		IAI47_13620	0.37	-0.4
2,888,601	+		IAI47_13620	0.37	+0.4
2,888,657	+		IAI47_13620	0.38	+1.6
2,888,657	+		IAI47_13620	0.38	-0.0
2,888,657	+		IAI47_13620	0.38	+0.6
2,888,658	-		IAI47_13620	0.39	+0.6
2,888,658	-		IAI47_13620	0.39	+0.1
2,888,658	-		IAI47_13620	0.39	-3.1
2,888,658	-				+2.6
2,888,658	-		IAI47_13620	0.39	-0.8
2,888,724	+		IAI47_13620	0.41	+0.3
2,888,724	+		IAI47_13620	0.41	-0.4
2,888,724	+		IAI47_13620	0.41	+0.6
2,888,724	+		IAI47_13620	0.41	+0.1
2,888,724	+		IAI47_13620	0.41	-0.4
2,888,724	+		IAI47_13620	0.41	+0.6
2,888,724	+		IAI47_13620	0.41	-1.4
2,888,724	+		IAI47_13620	0.41	+0.6
2,888,725	-		IAI47_13620	0.41	+0.8
2,888,725	-		IAI47_13620	0.41	+1.0
2,888,725	-		IAI47_13620	0.41	-0.4
2,888,725	-		IAI47_13620	0.41	+0.1
2,888,725	-		IAI47_13620	0.41	-0.9
2,888,725	-		IAI47_13620	0.41	-0.1
2,888,727	+		IAI47_13620	0.41	-1.1
2,888,727	+		IAI47_13620	0.41	+0.2
2,888,727	+		IAI47_13620	0.41	-0.0
2,888,727	+		IAI47_13620	0.41	-0.1
2,888,727	+		IAI47_13620	0.41	+2.6
2,888,728	-		IAI47_13620	0.41	+0.0
2,888,734	+		IAI47_13620	0.41	+1.2
2,888,734	+		IAI47_13620	0.41	+1.0
2,888,775	+		IAI47_13620	0.42	+0.5
2,888,776	-		IAI47_13620	0.42	+1.8
2,888,799	+		IAI47_13620	0.43	-0.5
2,888,800	-		IAI47_13620	0.43	+0.9
2,888,800	-		IAI47_13620	0.43	-0.8
2,888,970	+		IAI47_13620	0.49	-1.0
2,888,970	+		IAI47_13620	0.49	+0.8
2,888,971	-		IAI47_13620	0.49	-1.0
2,889,193	-		IAI47_13620	0.56	+0.5
2,889,328	-		IAI47_13620	0.60	-0.8
2,889,385	+		IAI47_13620	0.62	+1.8
2,889,385	+		IAI47_13620	0.62	+0.5
2,889,385	+		IAI47_13620	0.62	+1.7
2,889,696	+		IAI47_13620	0.72	+2.2
2,889,696	+		IAI47_13620	0.72	-0.6
2,889,710	+		IAI47_13620	0.73	-0.5
2,889,711	-		IAI47_13620	0.73	-1.1
2,889,879	+		IAI47_13620	0.78	+2.4
2,889,979	+		IAI47_13620	0.81	-0.5
2,889,979	+		IAI47_13620	0.81	+0.3
2,889,979	+		IAI47_13620	0.81	+2.6
2,889,979	+		IAI47_13620	0.81	+1.4
2,889,980	-		IAI47_13620	0.81	-1.6
2,889,980	-		IAI47_13620	0.81	+0.4
2,889,980	-		IAI47_13620	0.81	+0.3
2,890,041	-		IAI47_13620	0.83	+0.8
2,890,086	-		IAI47_13620	0.85	-1.1
2,890,143	-		IAI47_13620	0.87	-1.7
2,890,163	+		IAI47_13620	0.87	+1.1
2,890,400	+				+0.4
2,890,455	-				-1.0
2,890,455	-				-1.5
2,890,455	-				+1.2
2,890,490	+				-0.2
2,890,491	-				-0.8
2,890,496	+				+1.0
2,890,499	+				+1.7
2,890,499	+				-0.7
2,890,499	+				+1.3
2,890,499	+				-1.3
2,890,500	-				-0.3
2,890,500	-				-1.7
2,890,500	-				-2.0
2,890,500	-				-1.1
2,890,500	-				-2.3
2,890,500	-				-0.8
2,890,500	-				-2.6
2,890,500	-				+4.5
2,890,500	-				-1.9
2,890,502	+				+0.5
2,890,503	-				-1.4
2,890,535	-				-4.3
2,890,535	-				-1.4
2,890,543	+				-1.9
2,890,543	+				-0.6
2,890,543	+				-0.5
2,890,544	-				-1.2
2,890,544	-				-1.7
2,890,544	-				+0.3
2,890,544	-				-3.1
2,890,556	-				-1.7
2,890,556	-				-0.6
2,890,567	+				+0.9
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2,890,682	-		IAI47_13625	0.15	-0.2
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2,890,682	-		IAI47_13625	0.15	-2.1
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2,890,682	-		IAI47_13625	0.15	-2.8
2,890,741	+		IAI47_13625	0.21	-1.2
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2,890,799	-		IAI47_13625	0.27	-3.1
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2,890,825	+		IAI47_13625	0.29	-2.9
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2,891,047	-		IAI47_13625	0.52	-1.7
2,891,047	-		IAI47_13625	0.52	+0.6
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2,891,050	+		IAI47_13625	0.52	-1.9
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2,891,051	-		IAI47_13625	0.52	-2.2
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2,891,052	+				+2.6
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2,891,053	-		IAI47_13625	0.53	+1.3
2,891,053	-		IAI47_13625	0.53	-1.7
2,891,085	+		IAI47_13625	0.56	+0.3
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2,891,116	-		IAI47_13625	0.59	-1.6
2,891,116	-		IAI47_13625	0.59	-1.8
2,891,157	+		IAI47_13625	0.63	-1.9
2,891,309	+		IAI47_13625	0.79	-2.7
2,891,345	+		IAI47_13625	0.82	-0.4
2,891,345	+		IAI47_13625	0.82	-0.4
2,891,346	-		IAI47_13625	0.82	+0.1
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2,891,346	-		IAI47_13625	0.82	-0.1
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2,891,361	-		IAI47_13625	0.84	-0.4
2,891,361	-		IAI47_13625	0.84	-1.2
2,891,361	-		IAI47_13625	0.84	-0.5
2,891,393	+		IAI47_13625	0.87	-1.4
2,891,394	-		IAI47_13625	0.87	-1.7