Strain Fitness in Pantoea sp. MT58 around IAI47_12300

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,600,183	-		IAI47_12295	0.14	+0.5
2,600,211	+		IAI47_12295	0.16	+0.4
2,600,212	-		IAI47_12295	0.17	-0.7
2,600,212	-		IAI47_12295	0.17	+0.7
2,600,263	+		IAI47_12295	0.21	-0.7
2,600,263	+		IAI47_12295	0.21	+0.3
2,600,263	+		IAI47_12295	0.21	+1.9
2,600,263	+		IAI47_12295	0.21	-0.9
2,600,263	+		IAI47_12295	0.21	-0.3
2,600,264	-		IAI47_12295	0.21	+0.6
2,600,291	+		IAI47_12295	0.23	-1.7
2,600,291	+		IAI47_12295	0.23	-0.3
2,600,291	+		IAI47_12295	0.23	+0.6
2,600,291	+		IAI47_12295	0.23	+0.3
2,600,291	+		IAI47_12295	0.23	-1.3
2,600,291	+		IAI47_12295	0.23	-0.1
2,600,291	+		IAI47_12295	0.23	+0.2
2,600,292	-		IAI47_12295	0.23	-0.3
2,600,292	-		IAI47_12295	0.23	+0.3
2,600,361	+		IAI47_12295	0.29	+0.1
2,600,361	+		IAI47_12295	0.29	+2.2
2,600,361	+		IAI47_12295	0.29	-0.3
2,600,362	-		IAI47_12295	0.30	-0.3
2,600,362	-		IAI47_12295	0.30	+1.3
2,600,362	-		IAI47_12295	0.30	-1.0
2,600,362	-		IAI47_12295	0.30	+0.0
2,600,364	+		IAI47_12295	0.30	+1.4
2,600,364	+		IAI47_12295	0.30	-0.3
2,600,364	+		IAI47_12295	0.30	-2.1
2,600,364	+		IAI47_12295	0.30	-1.0
2,600,364	+		IAI47_12295	0.30	+1.3
2,600,395	-		IAI47_12295	0.32	+0.3
2,600,395	-		IAI47_12295	0.32	-1.2
2,600,457	+		IAI47_12295	0.38	-0.3
2,600,465	+		IAI47_12295	0.38	-0.3
2,600,539	-		IAI47_12295	0.45	-0.0
2,600,603	-		IAI47_12295	0.50	-0.2
2,600,640	-		IAI47_12295	0.54	-0.1
2,600,721	+		IAI47_12295	0.61	+0.2
2,600,721	+		IAI47_12295	0.61	-0.4
2,600,721	+		IAI47_12295	0.61	+0.8
2,600,721	+		IAI47_12295	0.61	-0.6
2,600,722	-		IAI47_12295	0.61	+1.3
2,600,722	-		IAI47_12295	0.61	-0.7
2,600,751	-		IAI47_12295	0.63	-0.7
2,600,751	-		IAI47_12295	0.63	+0.1
2,600,776	-		IAI47_12295	0.65	-0.4
2,600,776	-		IAI47_12295	0.65	+0.3
2,600,791	+		IAI47_12295	0.67	-0.1
2,600,791	+		IAI47_12295	0.67	-1.7
2,600,791	+		IAI47_12295	0.67	+0.0
2,600,791	+		IAI47_12295	0.67	+0.7
2,600,791	+		IAI47_12295	0.67	+0.3
2,600,791	+		IAI47_12295	0.67	-1.6
2,600,791	+		IAI47_12295	0.67	-0.8
2,600,792	-		IAI47_12295	0.67	-2.1
2,600,792	-		IAI47_12295	0.67	-1.3
2,600,792	-		IAI47_12295	0.67	+0.9
2,600,792	-		IAI47_12295	0.67	-0.0
2,600,792	-		IAI47_12295	0.67	-1.2
2,600,894	-		IAI47_12295	0.75	+0.2
2,600,894	-		IAI47_12295	0.75	-1.0
2,600,910	-		IAI47_12295	0.77	-0.5
2,601,087	-				+0.0
2,601,096	+				-0.1
2,601,175	+				+1.0
2,601,274	-		IAI47_12300	0.55	+0.3
2,601,274	-		IAI47_12300	0.55	+1.5
2,601,274	-		IAI47_12300	0.55	+1.1
2,601,274	-		IAI47_12300	0.55	-0.8
2,601,274	-		IAI47_12300	0.55	+2.7
2,601,319	-		IAI47_12300	0.81	-0.5
2,601,328	+		IAI47_12300	0.86	-0.1
2,601,329	-		IAI47_12300	0.87	+1.1
2,601,329	-		IAI47_12300	0.87	+1.7
2,601,363	+				-0.1
2,601,364	-				-0.3
2,601,364	-				+1.4
2,601,364	-				+0.2
2,601,408	+		IAI47_12305	0.12	-1.1
2,601,408	+		IAI47_12305	0.12	-0.7
2,601,408	+		IAI47_12305	0.12	-1.7
2,601,408	+		IAI47_12305	0.12	-1.0
2,601,409	-		IAI47_12305	0.12	-0.4
2,601,409	-		IAI47_12305	0.12	-1.7
2,601,409	-		IAI47_12305	0.12	-1.2
2,601,409	-		IAI47_12305	0.12	-0.1
2,601,412	+		IAI47_12305	0.15	-0.7
2,601,412	+		IAI47_12305	0.15	-1.4
2,601,412	+		IAI47_12305	0.15	-1.5
2,601,412	+		IAI47_12305	0.15	-1.4
2,601,412	+		IAI47_12305	0.15	-0.8
2,601,412	+		IAI47_12305	0.15	-1.7
2,601,413	-		IAI47_12305	0.15	-1.3
2,601,413	-		IAI47_12305	0.15	-0.4
2,601,413	-		IAI47_12305	0.15	-0.8
2,601,413	-		IAI47_12305	0.15	-1.2
2,601,427	+		IAI47_12305	0.25	-0.9
2,601,427	+		IAI47_12305	0.25	-0.4
2,601,428	-		IAI47_12305	0.26	-1.5
2,601,428	-		IAI47_12305	0.26	-0.8
2,601,428	-		IAI47_12305	0.26	-1.4
2,601,429	+		IAI47_12305	0.26	-1.9
2,601,429	+		IAI47_12305	0.26	-1.0
2,601,429	+		IAI47_12305	0.26	-0.7
2,601,429	+		IAI47_12305	0.26	-0.8
2,601,429	+		IAI47_12305	0.26	+1.2
2,601,430	-		IAI47_12305	0.27	-2.3
2,601,430	-		IAI47_12305	0.27	-1.8
2,601,534	+				-0.8
2,601,534	+				-1.5
2,601,534	+				-1.0
2,601,534	+				+0.3
2,601,534	+				-1.3
2,601,534	+				-0.1
2,601,534	+				+0.1
2,601,534	+				-2.4
2,601,534	+				-2.1
2,601,534	+				-1.5
2,601,535	-				-2.2
2,601,535	-				-2.2
2,601,535	-				+0.1
2,601,535	-				-1.7
2,601,535	-				-1.0
2,601,535	-				-0.4
2,601,535	-				-1.6
2,601,535	-				-0.6
2,601,535	-				-0.9
2,601,535	-				+0.8
2,601,535	-				-0.6
2,601,535	-				-0.6
2,601,538	+				-3.1
2,601,538	+				+0.3
2,601,538	+				-1.9
2,601,538	+				-0.8
2,601,538	+				-1.1
2,601,538	+				-1.7
2,601,539	-				-1.6
2,601,539	-				-1.4
2,601,539	-				-0.5
2,601,539	-				+0.2
2,601,539	-				-0.4
2,601,539	-				-0.8
2,601,539	-				-0.4
2,601,539	-				+0.1
2,601,539	-				-0.2
2,601,539	-				-1.3
2,601,539	-				-0.2
2,601,539	-				-1.1
2,601,553	-				+1.7
2,601,553	-				-0.3
2,601,567	+				-1.3
2,601,567	+				+0.3
2,601,587	+				-2.6
2,601,587	+				-0.7
2,601,588	-				-1.2
2,601,588	-				-0.2
2,601,588	-				-1.5
2,601,604	-				+1.7
2,601,648	+				-0.9
2,601,648	+				-0.1
2,601,704	+				+0.7
2,601,704	+				-0.4
2,601,704	+				+0.0
2,601,705	-				+1.3
2,601,705	-				+0.5
2,601,737	+				-0.5
2,601,737	+				-1.1
2,601,738	-				-0.1
2,601,738	-				-1.4
2,601,738	-				-0.2
2,601,739	+				+0.7
2,601,739	+				-2.2
2,601,739	+				+0.1
2,601,739	+				+0.2
2,601,739	+				-0.5
2,601,739	+				-0.1
2,601,740	-				-1.3
2,601,775	+				-1.0
2,601,776	-				+1.3
2,601,815	+		IAI47_12310	0.12	-0.2
2,601,894	-		IAI47_12310	0.18	+0.8
2,601,972	-		IAI47_12310	0.25	+0.3
2,601,972	-		IAI47_12310	0.25	+1.4
2,602,028	+		IAI47_12310	0.29	+1.6
2,602,028	+		IAI47_12310	0.29	-2.1
2,602,029	-		IAI47_12310	0.29	-1.0
2,602,031	+		IAI47_12310	0.30	+0.9
2,602,094	+		IAI47_12310	0.35	+0.5
2,602,095	-		IAI47_12310	0.35	-0.4
2,602,095	-		IAI47_12310	0.35	+1.9
2,602,138	+		IAI47_12310	0.38	-1.3
2,602,138	+		IAI47_12310	0.38	-0.7
2,602,139	-		IAI47_12310	0.38	-0.2
2,602,206	+		IAI47_12310	0.44	+1.6
2,602,207	-				+0.3
2,602,207	-		IAI47_12310	0.44	+1.6