Strain Fitness in Pantoea sp. MT58 around IAI47_10590

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,238,984	+		IAI47_10585	0.22	-0.5
2,238,984	+		IAI47_10585	0.22	-0.2
2,238,985	-		IAI47_10585	0.22	+1.2
2,239,053	+		IAI47_10585	0.27	-0.2
2,239,062	+		IAI47_10585	0.28	+0.0
2,239,062	+		IAI47_10585	0.28	-0.7
2,239,062	+		IAI47_10585	0.28	-0.7
2,239,063	-		IAI47_10585	0.28	+0.4
2,239,067	+		IAI47_10585	0.28	+0.2
2,239,067	+		IAI47_10585	0.28	-0.3
2,239,068	-		IAI47_10585	0.29	+0.8
2,239,068	-		IAI47_10585	0.29	+0.9
2,239,068	-		IAI47_10585	0.29	-0.8
2,239,068	-		IAI47_10585	0.29	-0.6
2,239,068	-		IAI47_10585	0.29	-1.6
2,239,068	-		IAI47_10585	0.29	-0.4
2,239,083	+		IAI47_10585	0.30	+1.4
2,239,099	-		IAI47_10585	0.31	+1.2
2,239,115	-		IAI47_10585	0.32	+0.4
2,239,127	+		IAI47_10585	0.33	-0.2
2,239,128	-		IAI47_10585	0.33	+0.6
2,239,128	-		IAI47_10585	0.33	+0.8
2,239,144	+		IAI47_10585	0.35	+1.8
2,239,144	+		IAI47_10585	0.35	-0.1
2,239,144	+		IAI47_10585	0.35	+2.8
2,239,145	-		IAI47_10585	0.35	-1.7
2,239,145	-		IAI47_10585	0.35	-1.0
2,239,145	-		IAI47_10585	0.35	+1.8
2,239,145	-		IAI47_10585	0.35	+0.1
2,239,145	-		IAI47_10585	0.35	+2.3
2,239,170	-		IAI47_10585	0.37	+1.1
2,239,170	-		IAI47_10585	0.37	+1.2
2,239,199	+		IAI47_10585	0.39	-1.5
2,239,199	+		IAI47_10585	0.39	-1.3
2,239,209	+		IAI47_10585	0.40	+0.6
2,239,304	+		IAI47_10585	0.47	+0.4
2,239,319	-		IAI47_10585	0.48	-0.9
2,239,319	-		IAI47_10585	0.48	+0.2
2,239,319	-		IAI47_10585	0.48	+0.8
2,239,339	-		IAI47_10585	0.50	+2.0
2,239,377	+		IAI47_10585	0.53	-0.6
2,239,635	+		IAI47_10585	0.73	+1.1
2,239,635	+		IAI47_10585	0.73	-1.4
2,239,636	-		IAI47_10585	0.73	+1.2
2,239,636	-		IAI47_10585	0.73	-0.1
2,239,662	+		IAI47_10585	0.75	+0.3
2,239,682	+		IAI47_10585	0.77	-0.9
2,239,682	+		IAI47_10585	0.77	+0.7
2,239,682	+		IAI47_10585	0.77	+1.0
2,239,774	+		IAI47_10585	0.84	-0.2
2,239,774	+		IAI47_10585	0.84	-0.8
2,239,775	-		IAI47_10585	0.84	+0.4
2,239,775	-		IAI47_10585	0.84	-0.2
2,239,775	-		IAI47_10585	0.84	+1.8
2,239,908	+				+1.0
2,239,909	-				+0.2
2,239,943	+				+1.2
2,239,944	-				+0.8
2,239,944	-				-1.4
2,239,991	+				-1.9
2,239,992	-				-1.1
2,239,992	-				-0.9
2,240,007	+				-0.4
2,240,054	+		IAI47_10590	0.20	-1.8
2,240,055	-		IAI47_10590	0.20	-0.2
2,240,108	+		IAI47_10590	0.34	+1.0
2,240,242	+		IAI47_10590	0.69	-1.0
2,240,242	+		IAI47_10590	0.69	-0.4
2,240,242	+		IAI47_10590	0.69	+0.2
2,240,242	+		IAI47_10590	0.69	+0.7
2,240,285	+		IAI47_10590	0.80	+0.9
2,240,285	+		IAI47_10590	0.80	-1.4
2,240,285	+		IAI47_10590	0.80	-1.0
2,240,286	-		IAI47_10590	0.80	-1.1
2,240,300	-		IAI47_10590	0.84	-0.3
2,240,300	-		IAI47_10590	0.84	-0.1
2,240,300	-		IAI47_10590	0.84	-0.4
2,240,300	-		IAI47_10590	0.84	-1.5
2,240,300	-		IAI47_10590	0.84	+0.2
2,240,342	+				+0.4
2,240,343	-				-0.8
2,240,345	-				+1.4
2,240,345	-				+1.8
2,240,384	+				-0.0
2,240,385	-				+0.1
2,240,443	+				+1.5
2,240,444	-				-0.4
2,240,455	+				+0.1
2,240,455	+				+1.0
2,240,456	-				-0.3
2,240,456	-				-0.1
2,240,456	-				-1.4
2,240,499	-				+1.5
2,240,499	-				-0.2
2,240,528	+				-0.9
2,240,529	-				+0.2
2,240,529	-				-0.7
2,240,529	-				+1.2
2,240,543	-				+0.4
2,240,579	+				+1.5
2,240,579	+				-1.5
2,240,579	+				-0.4
2,240,579	+				-0.2
2,240,580	-				+0.6
2,240,580	-				+1.3
2,240,593	-				+0.2
2,240,596	+				+0.2
2,240,596	+				+0.0
2,240,597	-				+0.6
2,240,597	-				+0.0
2,240,597	-				-1.2
2,240,597	-				-0.5
2,240,597	-				-1.4
2,240,611	+				-1.1
2,240,613	+				+0.4
2,240,613	+				-0.3
2,240,618	+				+0.1
2,240,618	+				+0.1
2,240,631	-				+0.4
2,240,705	-				+0.8
2,240,733	+				+1.0
2,240,734	-				+0.6
2,240,784	-		IAI47_10595	0.20	-1.6
2,240,805	-		IAI47_10595	0.28	-0.8
2,240,838	+		IAI47_10595	0.41	-1.1
2,240,839	-		IAI47_10595	0.42	+0.2
2,240,848	+		IAI47_10595	0.45	-1.6
2,240,871	-		IAI47_10595	0.54	-0.5
2,240,871	-		IAI47_10595	0.54	+1.0
2,240,871	-		IAI47_10595	0.54	+0.4
2,240,893	+		IAI47_10595	0.63	+0.1
2,240,894	-		IAI47_10595	0.63	-0.9
2,240,919	+		IAI47_10595	0.73	-0.3
2,240,920	-		IAI47_10595	0.74	+0.0
2,240,920	-		IAI47_10595	0.74	+0.9
2,240,922	+		IAI47_10595	0.75	-0.8
2,240,922	+		IAI47_10595	0.75	-0.1
2,240,922	+		IAI47_10595	0.75	+1.2
2,240,922	+		IAI47_10595	0.75	+0.8
2,240,922	+		IAI47_10595	0.75	+0.4
2,240,923	-		IAI47_10595	0.75	+0.3
2,240,923	-		IAI47_10595	0.75	-1.5
2,240,953	+		IAI47_10595	0.87	-0.1
2,240,954	-		IAI47_10595	0.87	-0.7
2,240,954	-		IAI47_10595	0.87	+0.4
2,240,954	-		IAI47_10595	0.87	-0.4
2,240,955	+		IAI47_10595	0.88	+1.2
2,240,955	+		IAI47_10595	0.88	-0.3
2,240,955	+		IAI47_10595	0.88	+3.2
2,240,956	-		IAI47_10595	0.88	-0.4
2,240,956	-		IAI47_10595	0.88	-1.7
2,240,956	-		IAI47_10595	0.88	+0.7
2,240,958	+		IAI47_10595	0.89	-1.0
2,240,958	+		IAI47_10595	0.89	+1.8
2,240,958	+		IAI47_10595	0.89	+2.4
2,240,958	+		IAI47_10595	0.89	+0.8
2,240,958	+		IAI47_10595	0.89	+0.3
2,240,958	+		IAI47_10595	0.89	-1.8
2,240,959	-		IAI47_10595	0.89	-0.4
2,240,959	-		IAI47_10595	0.89	-1.2
2,240,962	+				-0.2
2,240,962	+				-0.0
2,240,962	+				-0.9
2,240,963	-				+0.4
2,240,983	+				-0.5
2,240,983	+				-0.7
2,241,094	+				-0.9
2,241,094	+				+1.4
2,241,144	-		IAI47_10600	0.23	-1.0
2,241,203	+		IAI47_10600	0.49	+0.5
2,241,203	+		IAI47_10600	0.49	-1.8
2,241,203	+		IAI47_10600	0.49	+0.0
2,241,204	-		IAI47_10600	0.49	+1.8
2,241,263	+		IAI47_10600	0.76	+0.4
2,241,263	+		IAI47_10600	0.76	+0.7
2,241,263	+		IAI47_10600	0.76	+1.2
2,241,263	+		IAI47_10600	0.76	-1.5
2,241,263	+		IAI47_10600	0.76	-2.4
2,241,264	-		IAI47_10600	0.76	+0.8
2,241,264	-		IAI47_10600	0.76	+0.1
2,241,264	-		IAI47_10600	0.76	+1.4
2,241,264	-		IAI47_10600	0.76	-1.5
2,241,264	-		IAI47_10600	0.76	-0.0
2,241,264	-		IAI47_10600	0.76	-1.1
2,241,264	-		IAI47_10600	0.76	+1.9
2,241,304	+				-0.4
2,241,338	+				+0.4
2,241,338	+				-0.3
2,241,338	+				-1.6
2,241,338	+				+0.3
2,241,339	-				-1.1
2,241,339	-				-0.2
2,241,339	-				-0.7
2,241,339	-				+1.2
2,241,339	-				-0.1
2,241,339	-				-0.9
2,241,339	-				+2.6
2,241,351	+				+0.1
2,241,351	+				-1.9
2,241,351	+				-0.8
2,241,352	-				+1.5
2,241,352	-				+0.9
2,241,352	-				-0.2