Strain Fitness in Pantoea sp. MT58 around IAI47_08320

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,761,001	+		IAI47_08315	0.46	+0.2
1,761,001	+		IAI47_08315	0.46	-0.4
1,761,001	+		IAI47_08315	0.46	+1.2
1,761,001	+		IAI47_08315	0.46	-0.2
1,761,002	-		IAI47_08315	0.46	-0.6
1,761,002	-		IAI47_08315	0.46	-1.2
1,761,002	-		IAI47_08315	0.46	-1.9
1,761,002	-		IAI47_08315	0.46	-0.9
1,761,085	+		IAI47_08315	0.51	-1.0
1,761,086	-		IAI47_08315	0.51	+0.2
1,761,406	+		IAI47_08315	0.72	+2.2
1,761,406	+		IAI47_08315	0.72	-1.5
1,761,406	+		IAI47_08315	0.72	+1.0
1,761,406	+		IAI47_08315	0.72	+0.4
1,761,407	-		IAI47_08315	0.72	-1.1
1,761,407	-		IAI47_08315	0.72	-0.0
1,761,407	-		IAI47_08315	0.72	-0.8
1,761,407	-		IAI47_08315	0.72	+0.9
1,761,409	+		IAI47_08315	0.72	-0.4
1,761,410	-		IAI47_08315	0.72	+0.4
1,761,410	-		IAI47_08315	0.72	-0.0
1,761,689	-				-0.8
1,761,822	+				+0.5
1,761,823	-				-1.5
1,761,874	+				+1.0
1,761,874	+				-0.9
1,761,875	-				-0.6
1,761,891	+				-0.2
1,761,891	+				+0.3
1,761,892	-				-0.2
1,761,916	-				+0.2
1,761,919	+				+1.2
1,761,919	+				-1.4
1,761,920	-				+1.8
1,761,920	-				-0.5
1,761,920	-				-0.4
1,761,949	+				+0.4
1,761,949	+				+0.5
1,761,949	+				+0.2
1,761,949	+				-0.1
1,761,949	+				-1.6
1,761,949	+				+0.3
1,761,949	+				+1.0
1,761,949	+				+0.6
1,761,950	-				+1.4
1,761,950	-				+0.4
1,761,950	-				+0.4
1,761,950	-				-0.1
1,761,950	-				+0.4
1,761,950	-				+1.2
1,761,950	-				-0.0
1,761,950	-				+1.2
1,761,950	-				+1.0
1,761,950	-				+0.2
1,761,955	+				+1.9
1,761,955	+				-1.6
1,761,955	+				-0.6
1,761,956	-				-1.1
1,761,963	+				+1.2
1,762,057	+				-1.5
1,762,073	+				+2.4
1,762,073	+				+1.1
1,762,074	-				-0.2
1,762,074	-				+0.2
1,762,074	-				-0.0
1,762,074	-				-1.1
1,762,075	+				-1.5
1,762,076	-				-0.4
1,762,076	-				+1.2
1,762,076	-				-0.2
1,762,076	-				+0.3
1,762,090	+				+0.6
1,762,090	+				-0.6
1,762,279	+		IAI47_08320	0.20	+1.2
1,762,323	+		IAI47_08320	0.22	-1.0
1,762,324	-		IAI47_08320	0.22	+1.0
1,762,334	+		IAI47_08320	0.23	+0.6
1,762,334	+		IAI47_08320	0.23	+1.7
1,762,334	+		IAI47_08320	0.23	-0.3
1,762,334	+		IAI47_08320	0.23	+1.8
1,762,335	-		IAI47_08320	0.23	+1.4
1,762,335	-		IAI47_08320	0.23	-0.9
1,762,335	-		IAI47_08320	0.23	+1.3
1,762,335	-		IAI47_08320	0.23	-0.6
1,762,335	-		IAI47_08320	0.23	-0.9
1,762,335	-		IAI47_08320	0.23	-0.6
1,762,335	-		IAI47_08320	0.23	+0.8
1,762,335	-		IAI47_08320	0.23	-0.9
1,762,335	-		IAI47_08320	0.23	+0.6
1,762,336	+		IAI47_08320	0.23	+1.3
1,762,336	+		IAI47_08320	0.23	-0.4
1,762,337	-		IAI47_08320	0.23	-0.8
1,762,337	-		IAI47_08320	0.23	+1.8
1,762,343	+		IAI47_08320	0.23	-0.6
1,762,343	+		IAI47_08320	0.23	+1.2
1,762,344	-		IAI47_08320	0.23	+5.2
1,762,414	+		IAI47_08320	0.28	+1.6
1,762,448	+		IAI47_08320	0.30	+0.4
1,762,448	+		IAI47_08320	0.30	+0.6
1,762,449	-		IAI47_08320	0.30	+0.6
1,762,494	+		IAI47_08320	0.32	+0.4
1,762,495	-		IAI47_08320	0.32	+0.8
1,762,495	-		IAI47_08320	0.32	+0.1
1,762,514	+		IAI47_08320	0.34	-0.1
1,762,514	+		IAI47_08320	0.34	-1.4
1,762,525	+		IAI47_08320	0.34	-0.8
1,762,526	-		IAI47_08320	0.34	+1.6
1,762,526	-		IAI47_08320	0.34	-0.8
1,762,537	+		IAI47_08320	0.35	+0.9
1,762,537	+		IAI47_08320	0.35	+0.0
1,762,538	-		IAI47_08320	0.35	+2.8
1,762,538	-		IAI47_08320	0.35	-2.0
1,762,678	+		IAI47_08320	0.43	-0.7
1,762,679	-		IAI47_08320	0.43	-0.4
1,762,679	-		IAI47_08320	0.43	+0.6
1,762,679	-		IAI47_08320	0.43	-1.5
1,762,683	+		IAI47_08320	0.44	+0.6
1,762,684	-		IAI47_08320	0.44	-0.2
1,762,684	-		IAI47_08320	0.44	+0.3
1,762,684	-		IAI47_08320	0.44	+0.2
1,762,744	+		IAI47_08320	0.47	+0.7
1,762,781	+		IAI47_08320	0.50	-1.5
1,762,781	+		IAI47_08320	0.50	+0.2
1,762,781	+		IAI47_08320	0.50	+0.1
1,762,781	+		IAI47_08320	0.50	+0.8
1,762,781	+		IAI47_08320	0.50	+1.2
1,762,781	+		IAI47_08320	0.50	-0.2
1,762,781	+		IAI47_08320	0.50	-1.5
1,762,781	+		IAI47_08320	0.50	+0.2
1,762,781	+		IAI47_08320	0.50	-0.1
1,762,781	+		IAI47_08320	0.50	-0.6
1,762,781	+		IAI47_08320	0.50	+1.3
1,762,782	-		IAI47_08320	0.50	+0.6
1,762,782	-		IAI47_08320	0.50	+1.3
1,762,782	-		IAI47_08320	0.50	-0.6
1,762,782	-		IAI47_08320	0.50	-0.4
1,762,782	-		IAI47_08320	0.50	+0.2
1,762,782	-		IAI47_08320	0.50	+0.8
1,762,782	-		IAI47_08320	0.50	+0.6
1,762,782	-		IAI47_08320	0.50	+0.8
1,762,782	-		IAI47_08320	0.50	-0.6
1,763,023	+		IAI47_08320	0.64	+0.8
1,763,024	-		IAI47_08320	0.64	+0.8
1,763,024	-		IAI47_08320	0.64	-0.1
1,763,177	-		IAI47_08320	0.73	-0.6
1,763,200	+		IAI47_08320	0.75	+1.2
1,763,200	+		IAI47_08320	0.75	-0.0
1,763,201	-		IAI47_08320	0.75	-0.0
1,763,236	+		IAI47_08320	0.77	+0.9
1,763,253	+		IAI47_08320	0.78	-0.1
1,763,253	+		IAI47_08320	0.78	-2.0
1,763,254	-		IAI47_08320	0.78	-2.0
1,763,254	-		IAI47_08320	0.78	-0.4
1,763,399	-		IAI47_08320	0.86	+0.6
1,763,472	+				+0.6
1,763,472	+				+1.2
1,763,473	-				+0.6
1,763,473	-				+0.2
1,763,497	+				-0.0
1,763,559	+				-0.1
1,763,559	+				-0.2
1,763,560	-				+1.9
1,763,560	-				-1.0
1,763,624	+				-0.4
1,763,625	-				-0.9
1,763,625	-				-0.6
1,763,650	-				+1.0
1,763,650	-				+0.3
1,763,677	+				+1.5
1,763,677	+				-0.4
1,763,677	+				+0.6
1,763,677	+				+0.8
1,763,677	+				+0.3
1,763,677	+				+1.1
1,763,677	+				-1.1
1,763,677	+				-0.2
1,763,677	+				+1.5
1,763,677	+				-1.0
1,763,677	+				+1.9
1,763,678	-				+1.2
1,763,678	-				+0.0
1,763,682	+				+2.3
1,763,682	+				+1.0
1,763,682	+				+0.2
1,763,682	+				-0.7
1,763,682	+				-0.3
1,763,682	+				+1.0
1,763,682	+				+1.1
1,763,683	-				+1.3
1,763,683	-				+0.3
1,763,683	-				+0.4
1,763,683	-				+1.4
1,763,686	-				+0.6
1,763,686	-				-0.6
1,763,727	-				-2.4
1,763,818	+		IAI47_08325	0.13	+0.5
1,763,818	+		IAI47_08325	0.13	-0.9
1,763,818	+		IAI47_08325	0.13	+0.5
1,763,819	-		IAI47_08325	0.13	+2.8
1,763,819	-		IAI47_08325	0.13	-1.3
1,763,819	-		IAI47_08325	0.13	-0.2
1,763,819	-		IAI47_08325	0.13	+1.3
1,763,819	-		IAI47_08325	0.13	+0.4
1,763,838	-		IAI47_08325	0.15	-0.0
1,763,838	-		IAI47_08325	0.15	-0.9
1,763,866	+		IAI47_08325	0.18	+1.5
1,763,867	-		IAI47_08325	0.18	-1.5
1,763,892	+		IAI47_08325	0.21	+0.5
1,763,920	+		IAI47_08325	0.24	+2.8
1,763,921	-		IAI47_08325	0.25	+0.3
1,763,971	-		IAI47_08325	0.30	-0.2
1,764,048	+		IAI47_08325	0.39	+0.4
1,764,048	+		IAI47_08325	0.39	+2.0
1,764,048	+		IAI47_08325	0.39	-0.1
1,764,048	+		IAI47_08325	0.39	-1.6
1,764,048	+		IAI47_08325	0.39	+0.7
1,764,049	-		IAI47_08325	0.39	+0.7
1,764,078	+		IAI47_08325	0.42	+1.0
1,764,106	+		IAI47_08325	0.46	+0.1
1,764,106	+		IAI47_08325	0.46	-0.2
1,764,107	-		IAI47_08325	0.46	+1.1
1,764,107	-		IAI47_08325	0.46	-1.9
1,764,107	-		IAI47_08325	0.46	-1.2
1,764,184	-		IAI47_08325	0.55	+0.6
1,764,191	+		IAI47_08325	0.55	-0.2
1,764,192	-		IAI47_08325	0.56	-0.4
1,764,298	-		IAI47_08325	0.68	+1.0
1,764,298	-		IAI47_08325	0.68	-2.1
1,764,327	+		IAI47_08325	0.71	-1.9
1,764,327	+		IAI47_08325	0.71	+0.2
1,764,327	+		IAI47_08325	0.71	+0.8
1,764,328	-		IAI47_08325	0.71	+0.6
1,764,337	+		IAI47_08325	0.72	-0.7
1,764,349	-		IAI47_08325	0.74	-1.3
1,764,418	+		IAI47_08325	0.81	-1.3
1,764,418	+		IAI47_08325	0.81	-0.4
1,764,418	+		IAI47_08325	0.81	+0.3
1,764,419	-		IAI47_08325	0.82	+0.2
1,764,470	+		IAI47_08325	0.87	-1.7
1,764,471	-		IAI47_08325	0.88	+0.9
1,764,526	-				-0.2
1,764,557	-				+0.4
1,764,557	-				-0.6
1,764,604	+				+0.7
1,764,604	+				+0.6
1,764,604	+				-0.0
1,764,604	+				+0.2
1,764,604	+				+0.5
1,764,604	+				+0.8
1,764,605	-				-0.2
1,764,605	-				+0.4
1,764,605	-				+0.1
1,764,605	-				+0.8
1,764,605	-				+0.8
1,764,605	-				-1.6