Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23910 and HSERO_RS23915 are separated by 236 nucleotides HSERO_RS23915 and HSERO_RS23920 are separated by 9 nucleotides
HSERO_RS23910: HSERO_RS23910 - ABC transporter ATP-binding protein, at 5,478,572 to 5,480,362
_RS23910
HSERO_RS23915: HSERO_RS23915 - methyl-accepting chemotaxis protein, at 5,480,599 to 5,482,263
_RS23915
HSERO_RS23920: HSERO_RS23920 - phosphohydrolase, at 5,482,273 to 5,482,929
_RS23920
Position (kb) 5480
5481
5482
5483 Strain fitness (log2 ratio) -1
0
1 at 5479.606 kb on + strand, within HSERO_RS23910 at 5479.619 kb on + strand, within HSERO_RS23910 at 5479.746 kb on - strand, within HSERO_RS23910 at 5479.758 kb on + strand, within HSERO_RS23910 at 5479.920 kb on - strand, within HSERO_RS23910 at 5480.043 kb on - strand, within HSERO_RS23910 at 5480.049 kb on + strand, within HSERO_RS23910 at 5480.106 kb on + strand, within HSERO_RS23910 at 5480.114 kb on - strand, within HSERO_RS23910 at 5480.114 kb on - strand, within HSERO_RS23910 at 5480.180 kb on + strand, within HSERO_RS23910 at 5480.188 kb on - strand at 5480.216 kb on + strand at 5480.234 kb on - strand at 5480.419 kb on + strand at 5480.420 kb on + strand at 5480.652 kb on - strand at 5480.665 kb on - strand at 5480.670 kb on - strand at 5480.734 kb on - strand at 5480.739 kb on - strand at 5480.846 kb on - strand, within HSERO_RS23915 at 5480.850 kb on + strand, within HSERO_RS23915 at 5480.963 kb on + strand, within HSERO_RS23915 at 5481.191 kb on - strand, within HSERO_RS23915 at 5481.243 kb on - strand, within HSERO_RS23915 at 5481.292 kb on - strand, within HSERO_RS23915 at 5481.333 kb on + strand, within HSERO_RS23915 at 5481.389 kb on - strand, within HSERO_RS23915 at 5481.796 kb on + strand, within HSERO_RS23915 at 5481.918 kb on - strand, within HSERO_RS23915 at 5481.979 kb on - strand, within HSERO_RS23915 at 5481.989 kb on - strand, within HSERO_RS23915 at 5482.024 kb on - strand, within HSERO_RS23915 at 5482.078 kb on + strand, within HSERO_RS23915 at 5482.218 kb on + strand at 5482.226 kb on - strand at 5482.451 kb on + strand, within HSERO_RS23920 at 5482.493 kb on - strand, within HSERO_RS23920 at 5482.556 kb on + strand, within HSERO_RS23920 at 5482.602 kb on - strand, within HSERO_RS23920 at 5482.642 kb on - strand, within HSERO_RS23920 at 5482.771 kb on + strand, within HSERO_RS23920 at 5482.921 kb on - strand at 5483.216 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 5,479,606 + HSERO_RS23910 0.58 -0.1 5,479,619 + HSERO_RS23910 0.58 -0.3 5,479,746 - HSERO_RS23910 0.66 +0.1 5,479,758 + HSERO_RS23910 0.66 -0.1 5,479,920 - HSERO_RS23910 0.75 +0.2 5,480,043 - HSERO_RS23910 0.82 -0.3 5,480,049 + HSERO_RS23910 0.82 -0.6 5,480,106 + HSERO_RS23910 0.86 +0.2 5,480,114 - HSERO_RS23910 0.86 -0.3 5,480,114 - HSERO_RS23910 0.86 +0.3 5,480,180 + HSERO_RS23910 0.90 +0.0 5,480,188 - +0.1 5,480,216 + +0.2 5,480,234 - +0.0 5,480,419 + +0.6 5,480,420 + -0.1 5,480,652 - -0.3 5,480,665 - +0.1 5,480,670 - +0.2 5,480,734 - -0.1 5,480,739 - -0.9 5,480,846 - HSERO_RS23915 0.15 -0.1 5,480,850 + HSERO_RS23915 0.15 +0.3 5,480,963 + HSERO_RS23915 0.22 +0.2 5,481,191 - HSERO_RS23915 0.36 -0.6 5,481,243 - HSERO_RS23915 0.39 -0.4 5,481,292 - HSERO_RS23915 0.42 -0.0 5,481,333 + HSERO_RS23915 0.44 +0.0 5,481,389 - HSERO_RS23915 0.47 +0.5 5,481,796 + HSERO_RS23915 0.72 +0.0 5,481,918 - HSERO_RS23915 0.79 -0.5 5,481,979 - HSERO_RS23915 0.83 +1.0 5,481,989 - HSERO_RS23915 0.83 -0.8 5,482,024 - HSERO_RS23915 0.86 +0.2 5,482,078 + HSERO_RS23915 0.89 -0.5 5,482,218 + +0.4 5,482,226 - -0.1 5,482,451 + HSERO_RS23920 0.27 +0.3 5,482,493 - HSERO_RS23920 0.33 -0.2 5,482,556 + HSERO_RS23920 0.43 -0.4 5,482,602 - HSERO_RS23920 0.50 -0.1 5,482,642 - HSERO_RS23920 0.56 -0.3 5,482,771 + HSERO_RS23920 0.76 -0.0 5,482,921 - +0.5 5,483,216 - -0.0
Or see this region's nucleotide sequence