Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23490 and HSERO_RS23495 are separated by 27 nucleotides HSERO_RS23495 and HSERO_RS23500 are separated by 55 nucleotides HSERO_RS23500 and HSERO_RS23505 are separated by 285 nucleotides HSERO_RS23505 and HSERO_RS23510 are separated by 62 nucleotides
HSERO_RS23490: HSERO_RS23490 - hypothetical protein, at 5,387,434 to 5,387,703
_RS23490
HSERO_RS23495: HSERO_RS23495 - alpha/beta hydrolase, at 5,387,731 to 5,388,426
_RS23495
HSERO_RS23500: HSERO_RS23500 - MFS transporter permease, at 5,388,482 to 5,389,639
_RS23500
HSERO_RS23505: HSERO_RS23505 - transcriptional regulator, at 5,389,925 to 5,390,524
_RS23505
HSERO_RS23510: HSERO_RS23510 - MFS transporter, at 5,390,587 to 5,391,795
_RS23510
Position (kb) 5388
5389
5390 Strain fitness (log2 ratio) -1
0
1 at 5387.609 kb on - strand, within HSERO_RS23490 at 5387.686 kb on - strand at 5387.712 kb on - strand at 5387.756 kb on + strand at 5387.761 kb on + strand at 5387.769 kb on - strand at 5387.900 kb on + strand, within HSERO_RS23495 at 5388.019 kb on + strand, within HSERO_RS23495 at 5388.212 kb on + strand at 5388.280 kb on - strand, within HSERO_RS23495 at 5388.282 kb on + strand, within HSERO_RS23495 at 5388.859 kb on + strand, within HSERO_RS23500 at 5388.884 kb on + strand, within HSERO_RS23500 at 5388.884 kb on + strand, within HSERO_RS23500 at 5388.892 kb on - strand, within HSERO_RS23500 at 5389.102 kb on - strand, within HSERO_RS23500 at 5389.138 kb on + strand, within HSERO_RS23500 at 5389.280 kb on + strand, within HSERO_RS23500 at 5389.288 kb on - strand, within HSERO_RS23500 at 5389.480 kb on + strand, within HSERO_RS23500 at 5389.580 kb on - strand at 5389.635 kb on - strand at 5389.748 kb on - strand at 5389.856 kb on - strand at 5389.962 kb on - strand at 5390.092 kb on + strand, within HSERO_RS23505 at 5390.100 kb on - strand, within HSERO_RS23505 at 5390.254 kb on - strand, within HSERO_RS23505 at 5390.486 kb on - strand at 5390.486 kb on - strand at 5390.531 kb on + strand at 5390.531 kb on - strand at 5390.531 kb on - strand at 5390.536 kb on + strand at 5390.544 kb on - strand at 5390.544 kb on - strand at 5390.591 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 5,387,609 - HSERO_RS23490 0.65 +0.8 5,387,686 - +0.2 5,387,712 - +0.2 5,387,756 + -0.9 5,387,761 + -0.1 5,387,769 - +0.3 5,387,900 + HSERO_RS23495 0.24 -0.2 5,388,019 + HSERO_RS23495 0.41 -0.3 5,388,212 + +0.6 5,388,280 - HSERO_RS23495 0.79 -0.2 5,388,282 + HSERO_RS23495 0.79 -1.1 5,388,859 + HSERO_RS23500 0.33 +1.3 5,388,884 + HSERO_RS23500 0.35 +0.3 5,388,884 + HSERO_RS23500 0.35 +0.1 5,388,892 - HSERO_RS23500 0.35 +0.6 5,389,102 - HSERO_RS23500 0.54 +0.2 5,389,138 + HSERO_RS23500 0.57 -0.5 5,389,280 + HSERO_RS23500 0.69 -0.1 5,389,288 - HSERO_RS23500 0.70 +0.5 5,389,480 + HSERO_RS23500 0.86 +1.4 5,389,580 - +0.0 5,389,635 - -0.2 5,389,748 - +0.7 5,389,856 - +0.5 5,389,962 - +0.6 5,390,092 + HSERO_RS23505 0.28 +1.0 5,390,100 - HSERO_RS23505 0.29 +0.2 5,390,254 - HSERO_RS23505 0.55 +0.7 5,390,486 - +0.6 5,390,486 - +0.8 5,390,531 + -0.0 5,390,531 - -0.1 5,390,531 - +0.2 5,390,536 + +0.3 5,390,544 - -0.9 5,390,544 - -0.5 5,390,591 - -0.0
Or see this region's nucleotide sequence