Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23280 and HSERO_RS23285 are separated by 204 nucleotides HSERO_RS23285 and HSERO_RS23290 overlap by 37 nucleotides HSERO_RS23290 and HSERO_RS23295 are separated by 130 nucleotides
HSERO_RS23280: HSERO_RS23280 - hypothetical protein, at 5,342,283 to 5,343,794
_RS23280
HSERO_RS23285: HSERO_RS23285 - membrane protein, at 5,343,999 to 5,345,600
_RS23285
HSERO_RS23290: HSERO_RS23290 - taurine dioxygenase, at 5,345,564 to 5,346,454
_RS23290
HSERO_RS23295: HSERO_RS23295 - transcription factor, at 5,346,585 to 5,347,475
_RS23295
Position (kb) 5343
5344
5345
5346 Strain fitness (log2 ratio) -1
0
1 at 5343.031 kb on + strand, within HSERO_RS23280 at 5343.074 kb on + strand, within HSERO_RS23280 at 5343.267 kb on - strand, within HSERO_RS23280 at 5343.267 kb on - strand, within HSERO_RS23280 at 5343.274 kb on + strand, within HSERO_RS23280 at 5343.361 kb on + strand, within HSERO_RS23280 at 5343.425 kb on - strand, within HSERO_RS23280 at 5343.572 kb on - strand, within HSERO_RS23280 at 5343.648 kb on + strand at 5343.648 kb on + strand at 5343.854 kb on - strand at 5343.874 kb on - strand at 5343.887 kb on + strand at 5344.026 kb on - strand at 5344.189 kb on - strand, within HSERO_RS23285 at 5344.216 kb on - strand, within HSERO_RS23285 at 5344.433 kb on + strand, within HSERO_RS23285 at 5344.448 kb on + strand, within HSERO_RS23285 at 5344.456 kb on - strand, within HSERO_RS23285 at 5344.510 kb on + strand at 5344.613 kb on - strand, within HSERO_RS23285 at 5345.358 kb on + strand, within HSERO_RS23285 at 5345.363 kb on + strand, within HSERO_RS23285 at 5345.368 kb on + strand, within HSERO_RS23285 at 5345.554 kb on - strand at 5345.580 kb on + strand at 5345.690 kb on - strand, within HSERO_RS23290 at 5345.733 kb on + strand, within HSERO_RS23290 at 5345.847 kb on - strand, within HSERO_RS23290 at 5345.993 kb on + strand, within HSERO_RS23290 at 5346.014 kb on + strand, within HSERO_RS23290 at 5346.274 kb on + strand, within HSERO_RS23290 at 5346.311 kb on - strand, within HSERO_RS23290 at 5346.311 kb on - strand, within HSERO_RS23290 at 5346.345 kb on + strand, within HSERO_RS23290 at 5346.358 kb on - strand, within HSERO_RS23290 at 5346.475 kb on - strand at 5346.500 kb on - strand at 5346.500 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 5,343,031 + HSERO_RS23280 0.49 -0.9 5,343,074 + HSERO_RS23280 0.52 +1.0 5,343,267 - HSERO_RS23280 0.65 -0.1 5,343,267 - HSERO_RS23280 0.65 +0.3 5,343,274 + HSERO_RS23280 0.66 +1.3 5,343,361 + HSERO_RS23280 0.71 +0.3 5,343,425 - HSERO_RS23280 0.76 +0.3 5,343,572 - HSERO_RS23280 0.85 -1.0 5,343,648 + -0.0 5,343,648 + -0.5 5,343,854 - +0.1 5,343,874 - +0.2 5,343,887 + +0.7 5,344,026 - +0.3 5,344,189 - HSERO_RS23285 0.12 +0.2 5,344,216 - HSERO_RS23285 0.14 -0.6 5,344,433 + HSERO_RS23285 0.27 -0.2 5,344,448 + HSERO_RS23285 0.28 +0.3 5,344,456 - HSERO_RS23285 0.29 +0.5 5,344,510 + -0.3 5,344,613 - HSERO_RS23285 0.38 -0.0 5,345,358 + HSERO_RS23285 0.85 -0.3 5,345,363 + HSERO_RS23285 0.85 -0.1 5,345,368 + HSERO_RS23285 0.85 +0.0 5,345,554 - -0.1 5,345,580 + -1.0 5,345,690 - HSERO_RS23290 0.14 +0.0 5,345,733 + HSERO_RS23290 0.19 +0.0 5,345,847 - HSERO_RS23290 0.32 +0.6 5,345,993 + HSERO_RS23290 0.48 +0.1 5,346,014 + HSERO_RS23290 0.51 -0.3 5,346,274 + HSERO_RS23290 0.80 -0.1 5,346,311 - HSERO_RS23290 0.84 +0.4 5,346,311 - HSERO_RS23290 0.84 +0.2 5,346,345 + HSERO_RS23290 0.88 -0.2 5,346,358 - HSERO_RS23290 0.89 -0.1 5,346,475 - +0.1 5,346,500 - -0.2 5,346,500 - -0.0
Or see this region's nucleotide sequence