Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23210 and HSERO_RS23215 are separated by 454 nucleotides HSERO_RS23215 and HSERO_RS23220 are separated by 320 nucleotides HSERO_RS23220 and HSERO_RS23225 are separated by 121 nucleotides
HSERO_RS23210: HSERO_RS23210 - protein-disulfide isomerase, at 5,324,930 to 5,325,655
_RS23210
HSERO_RS23215: HSERO_RS23215 - methyl-accepting chemotaxis protein, at 5,326,110 to 5,327,678
_RS23215
HSERO_RS23220: HSERO_RS23220 - hypothetical protein, at 5,327,999 to 5,328,229
_RS23220
HSERO_RS23225: HSERO_RS23225 - methyl-accepting chemotaxis protein, at 5,328,351 to 5,330,099
_RS23225
Position (kb) 5326
5327
5328 Strain fitness (log2 ratio) -1
0
1 at 5325.441 kb on - strand, within HSERO_RS23210 at 5325.518 kb on - strand, within HSERO_RS23210 at 5325.613 kb on - strand at 5325.615 kb on + strand at 5325.615 kb on + strand at 5325.707 kb on - strand at 5325.908 kb on + strand at 5325.932 kb on - strand at 5325.997 kb on + strand at 5326.347 kb on - strand, within HSERO_RS23215 at 5326.394 kb on - strand, within HSERO_RS23215 at 5326.439 kb on - strand, within HSERO_RS23215 at 5326.484 kb on - strand, within HSERO_RS23215 at 5326.489 kb on + strand, within HSERO_RS23215 at 5326.501 kb on + strand, within HSERO_RS23215 at 5326.504 kb on - strand, within HSERO_RS23215 at 5326.511 kb on + strand, within HSERO_RS23215 at 5326.806 kb on - strand, within HSERO_RS23215 at 5327.002 kb on - strand, within HSERO_RS23215 at 5327.049 kb on + strand, within HSERO_RS23215 at 5327.086 kb on + strand, within HSERO_RS23215 at 5327.350 kb on + strand, within HSERO_RS23215 at 5327.519 kb on + strand, within HSERO_RS23215 at 5327.519 kb on + strand, within HSERO_RS23215 at 5327.522 kb on - strand at 5327.527 kb on - strand at 5327.527 kb on - strand at 5327.576 kb on + strand at 5327.682 kb on + strand at 5327.755 kb on - strand at 5327.817 kb on + strand at 5327.828 kb on - strand at 5327.848 kb on - strand at 5328.011 kb on + strand at 5328.081 kb on - strand, within HSERO_RS23220 at 5328.095 kb on - strand, within HSERO_RS23220 at 5328.102 kb on + strand, within HSERO_RS23220 at 5328.102 kb on + strand, within HSERO_RS23220 at 5328.165 kb on + strand, within HSERO_RS23220 at 5328.208 kb on + strand at 5328.211 kb on - strand at 5328.216 kb on - strand at 5328.462 kb on - strand at 5328.508 kb on - strand at 5328.521 kb on + strand at 5328.573 kb on + strand, within HSERO_RS23225
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 5,325,441 - HSERO_RS23210 0.70 +0.3 5,325,518 - HSERO_RS23210 0.81 -0.7 5,325,613 - +0.4 5,325,615 + -0.3 5,325,615 + -1.7 5,325,707 - +0.4 5,325,908 + -0.3 5,325,932 - +0.8 5,325,997 + +0.1 5,326,347 - HSERO_RS23215 0.15 -0.2 5,326,394 - HSERO_RS23215 0.18 -0.5 5,326,439 - HSERO_RS23215 0.21 +0.2 5,326,484 - HSERO_RS23215 0.24 -0.6 5,326,489 + HSERO_RS23215 0.24 +0.1 5,326,501 + HSERO_RS23215 0.25 +0.0 5,326,504 - HSERO_RS23215 0.25 +0.1 5,326,511 + HSERO_RS23215 0.26 +0.1 5,326,806 - HSERO_RS23215 0.44 -0.2 5,327,002 - HSERO_RS23215 0.57 +0.4 5,327,049 + HSERO_RS23215 0.60 -0.1 5,327,086 + HSERO_RS23215 0.62 -0.2 5,327,350 + HSERO_RS23215 0.79 +0.7 5,327,519 + HSERO_RS23215 0.90 +0.5 5,327,519 + HSERO_RS23215 0.90 -0.1 5,327,522 - +0.3 5,327,527 - +0.2 5,327,527 - +0.3 5,327,576 + +0.3 5,327,682 + -0.0 5,327,755 - -1.2 5,327,817 + -0.4 5,327,828 - +0.1 5,327,848 - -0.1 5,328,011 + -0.5 5,328,081 - HSERO_RS23220 0.35 +0.0 5,328,095 - HSERO_RS23220 0.42 -0.3 5,328,102 + HSERO_RS23220 0.45 -0.5 5,328,102 + HSERO_RS23220 0.45 -0.0 5,328,165 + HSERO_RS23220 0.72 +0.0 5,328,208 + -0.1 5,328,211 - -0.1 5,328,216 - -0.2 5,328,462 - +0.1 5,328,508 - +0.3 5,328,521 + +0.6 5,328,573 + HSERO_RS23225 0.13 -0.1
Or see this region's nucleotide sequence