Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23040 and HSERO_RS23045 are separated by 433 nucleotides HSERO_RS23045 and HSERO_RS23050 are separated by 85 nucleotides
HSERO_RS23040: HSERO_RS23040 - D-galacturonate dehydrogenase (EC 1.1.1.203) <small>(from data)</small>, at 5,284,322 to 5,285,176
_RS23040
HSERO_RS23045: HSERO_RS23045 - methyl-accepting chemotaxis protein, at 5,285,610 to 5,287,244
_RS23045
HSERO_RS23050: HSERO_RS23050 - transporter, at 5,287,330 to 5,288,775
_RS23050
Position (kb) 5285
5286
5287
5288 Strain fitness (log2 ratio) -2
-1
0
1 at 5284.677 kb on + strand, within HSERO_RS23040 at 5284.685 kb on - strand, within HSERO_RS23040 at 5284.685 kb on - strand, within HSERO_RS23040 at 5284.982 kb on + strand, within HSERO_RS23040 at 5285.119 kb on + strand at 5285.224 kb on + strand at 5285.307 kb on - strand at 5285.458 kb on - strand at 5285.504 kb on + strand at 5285.614 kb on - strand at 5285.719 kb on - strand at 5285.799 kb on + strand, within HSERO_RS23045 at 5285.836 kb on + strand, within HSERO_RS23045 at 5285.917 kb on - strand, within HSERO_RS23045 at 5285.954 kb on + strand, within HSERO_RS23045 at 5285.954 kb on + strand, within HSERO_RS23045 at 5285.962 kb on - strand, within HSERO_RS23045 at 5285.962 kb on - strand, within HSERO_RS23045 at 5286.101 kb on + strand, within HSERO_RS23045 at 5286.101 kb on + strand, within HSERO_RS23045 at 5286.101 kb on + strand, within HSERO_RS23045 at 5286.106 kb on + strand, within HSERO_RS23045 at 5286.109 kb on - strand, within HSERO_RS23045 at 5286.109 kb on - strand, within HSERO_RS23045 at 5286.199 kb on + strand, within HSERO_RS23045 at 5286.207 kb on - strand, within HSERO_RS23045 at 5286.207 kb on - strand, within HSERO_RS23045 at 5286.252 kb on - strand, within HSERO_RS23045 at 5286.279 kb on + strand, within HSERO_RS23045 at 5286.279 kb on + strand, within HSERO_RS23045 at 5286.284 kb on + strand, within HSERO_RS23045 at 5286.346 kb on + strand, within HSERO_RS23045 at 5286.536 kb on + strand, within HSERO_RS23045 at 5286.807 kb on - strand, within HSERO_RS23045 at 5286.969 kb on + strand, within HSERO_RS23045 at 5286.996 kb on - strand, within HSERO_RS23045 at 5287.246 kb on - strand at 5287.250 kb on + strand at 5287.375 kb on + strand at 5287.388 kb on + strand at 5287.389 kb on - strand at 5287.454 kb on + strand at 5287.468 kb on - strand at 5287.505 kb on + strand, within HSERO_RS23050 at 5287.564 kb on - strand, within HSERO_RS23050 at 5287.564 kb on - strand, within HSERO_RS23050 at 5287.587 kb on + strand, within HSERO_RS23050 at 5287.590 kb on - strand at 5287.595 kb on - strand, within HSERO_RS23050 at 5288.035 kb on - strand, within HSERO_RS23050 at 5288.083 kb on + strand, within HSERO_RS23050 at 5288.154 kb on + strand, within HSERO_RS23050 at 5288.162 kb on - strand, within HSERO_RS23050
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 5,284,677 + HSERO_RS23040 0.42 -2.0 5,284,685 - HSERO_RS23040 0.42 +0.3 5,284,685 - HSERO_RS23040 0.42 -0.0 5,284,982 + HSERO_RS23040 0.77 +1.1 5,285,119 + +0.4 5,285,224 + -0.4 5,285,307 - -0.1 5,285,458 - -0.3 5,285,504 + -0.3 5,285,614 - +0.3 5,285,719 - -0.0 5,285,799 + HSERO_RS23045 0.12 -0.1 5,285,836 + HSERO_RS23045 0.14 +0.7 5,285,917 - HSERO_RS23045 0.19 +0.4 5,285,954 + HSERO_RS23045 0.21 -0.6 5,285,954 + HSERO_RS23045 0.21 -1.6 5,285,962 - HSERO_RS23045 0.22 -0.1 5,285,962 - HSERO_RS23045 0.22 -0.2 5,286,101 + HSERO_RS23045 0.30 -0.1 5,286,101 + HSERO_RS23045 0.30 -0.6 5,286,101 + HSERO_RS23045 0.30 -1.0 5,286,106 + HSERO_RS23045 0.30 -0.7 5,286,109 - HSERO_RS23045 0.31 -0.0 5,286,109 - HSERO_RS23045 0.31 -0.1 5,286,199 + HSERO_RS23045 0.36 +0.5 5,286,207 - HSERO_RS23045 0.37 -1.5 5,286,207 - HSERO_RS23045 0.37 +0.5 5,286,252 - HSERO_RS23045 0.39 -1.2 5,286,279 + HSERO_RS23045 0.41 -0.0 5,286,279 + HSERO_RS23045 0.41 -0.0 5,286,284 + HSERO_RS23045 0.41 -0.9 5,286,346 + HSERO_RS23045 0.45 -0.3 5,286,536 + HSERO_RS23045 0.57 +0.0 5,286,807 - HSERO_RS23045 0.73 -0.5 5,286,969 + HSERO_RS23045 0.83 +0.0 5,286,996 - HSERO_RS23045 0.85 -1.2 5,287,246 - -0.2 5,287,250 + +0.6 5,287,375 + +0.5 5,287,388 + +0.0 5,287,389 - +0.4 5,287,454 + +0.4 5,287,468 - +0.2 5,287,505 + HSERO_RS23050 0.12 -0.2 5,287,564 - HSERO_RS23050 0.16 -0.2 5,287,564 - HSERO_RS23050 0.16 +0.4 5,287,587 + HSERO_RS23050 0.18 +0.5 5,287,590 - -1.0 5,287,595 - HSERO_RS23050 0.18 -0.1 5,288,035 - HSERO_RS23050 0.49 +0.4 5,288,083 + HSERO_RS23050 0.52 +0.4 5,288,154 + HSERO_RS23050 0.57 -0.1 5,288,162 - HSERO_RS23050 0.58 -0.2
Or see this region's nucleotide sequence