Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21625 and HSERO_RS21630 overlap by 4 nucleotides HSERO_RS21630 and HSERO_RS21635 are separated by 21 nucleotides HSERO_RS21635 and HSERO_RS21640 are separated by 116 nucleotides
HSERO_RS21625: HSERO_RS21625 - NAD(FAD)-utilizing dehydrogenase, at 4,951,351 to 4,952,649
_RS21625
HSERO_RS21630: HSERO_RS21630 - SlyX family protein, at 4,952,646 to 4,952,855
_RS21630
HSERO_RS21635: HSERO_RS21635 - DNA-directed DNA polymerase, at 4,952,877 to 4,954,031
_RS21635
HSERO_RS21640: HSERO_RS21640 - recombinase RdgC, at 4,954,148 to 4,955,074
_RS21640
Position (kb) 4952
4953
4954
4955 Strain fitness (log2 ratio) -2
-1
0
1 at 4951.937 kb on - strand, within HSERO_RS21625 at 4952.046 kb on + strand, within HSERO_RS21625 at 4952.046 kb on + strand, within HSERO_RS21625 at 4952.115 kb on + strand, within HSERO_RS21625 at 4952.139 kb on + strand, within HSERO_RS21625 at 4952.147 kb on - strand, within HSERO_RS21625 at 4952.172 kb on + strand, within HSERO_RS21625 at 4952.216 kb on + strand, within HSERO_RS21625 at 4952.500 kb on + strand, within HSERO_RS21625 at 4952.857 kb on - strand at 4953.177 kb on - strand, within HSERO_RS21635 at 4953.391 kb on + strand, within HSERO_RS21635 at 4953.497 kb on - strand, within HSERO_RS21635 at 4953.532 kb on - strand at 4953.639 kb on + strand, within HSERO_RS21635 at 4953.809 kb on + strand, within HSERO_RS21635 at 4954.010 kb on - strand at 4954.011 kb on + strand at 4954.176 kb on - strand at 4954.253 kb on + strand, within HSERO_RS21640 at 4954.363 kb on + strand, within HSERO_RS21640 at 4954.481 kb on - strand, within HSERO_RS21640 at 4954.594 kb on - strand, within HSERO_RS21640 at 4955.015 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 4,951,937 - HSERO_RS21625 0.45 -0.0 4,952,046 + HSERO_RS21625 0.54 +0.2 4,952,046 + HSERO_RS21625 0.54 -0.6 4,952,115 + HSERO_RS21625 0.59 -0.0 4,952,139 + HSERO_RS21625 0.61 -0.2 4,952,147 - HSERO_RS21625 0.61 -0.4 4,952,172 + HSERO_RS21625 0.63 -0.1 4,952,216 + HSERO_RS21625 0.67 +0.2 4,952,500 + HSERO_RS21625 0.88 -0.0 4,952,857 - +0.3 4,953,177 - HSERO_RS21635 0.26 +0.5 4,953,391 + HSERO_RS21635 0.45 -0.2 4,953,497 - HSERO_RS21635 0.54 +0.8 4,953,532 - +0.6 4,953,639 + HSERO_RS21635 0.66 +0.4 4,953,809 + HSERO_RS21635 0.81 +0.6 4,954,010 - -0.0 4,954,011 + +0.6 4,954,176 - -0.9 4,954,253 + HSERO_RS21640 0.11 -0.9 4,954,363 + HSERO_RS21640 0.23 -0.9 4,954,481 - HSERO_RS21640 0.36 -0.8 4,954,594 - HSERO_RS21640 0.48 -2.0 4,955,015 + -1.9
Or see this region's nucleotide sequence