Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS19685 and HSERO_RS19690 are separated by 413 nucleotides HSERO_RS19690 and HSERO_RS19695 are separated by 31 nucleotides
HSERO_RS19685: HSERO_RS19685 - 4-aminobutyrate aminotransferase, at 4,515,790 to 4,517,160
_RS19685
HSERO_RS19690: HSERO_RS19690 - methyl-accepting chemotaxis protein, at 4,517,574 to 4,519,181
_RS19690
HSERO_RS19695: HSERO_RS19695 - aldehyde dehydrogenase, at 4,519,213 to 4,520,655
_RS19695
Position (kb) 4517
4518
4519
4520 Strain fitness (log2 ratio) -1
0
1
2 at 4516.603 kb on + strand, within HSERO_RS19685 at 4516.658 kb on - strand, within HSERO_RS19685 at 4516.847 kb on - strand, within HSERO_RS19685 at 4516.938 kb on - strand, within HSERO_RS19685 at 4516.938 kb on - strand, within HSERO_RS19685 at 4516.987 kb on + strand, within HSERO_RS19685 at 4517.005 kb on + strand, within HSERO_RS19685 at 4517.007 kb on - strand, within HSERO_RS19685 at 4517.140 kb on + strand at 4517.192 kb on + strand at 4517.283 kb on - strand at 4517.331 kb on - strand at 4517.412 kb on - strand at 4517.659 kb on + strand at 4517.712 kb on + strand at 4517.753 kb on - strand, within HSERO_RS19690 at 4517.814 kb on + strand, within HSERO_RS19690 at 4517.972 kb on - strand, within HSERO_RS19690 at 4517.999 kb on + strand, within HSERO_RS19690 at 4518.007 kb on - strand, within HSERO_RS19690 at 4518.195 kb on - strand, within HSERO_RS19690 at 4518.200 kb on + strand, within HSERO_RS19690 at 4518.237 kb on + strand, within HSERO_RS19690 at 4518.245 kb on - strand, within HSERO_RS19690 at 4518.245 kb on - strand, within HSERO_RS19690 at 4518.351 kb on + strand, within HSERO_RS19690 at 4518.457 kb on - strand, within HSERO_RS19690 at 4518.635 kb on - strand at 4518.776 kb on - strand, within HSERO_RS19690 at 4518.892 kb on + strand, within HSERO_RS19690 at 4518.892 kb on + strand, within HSERO_RS19690 at 4518.892 kb on + strand, within HSERO_RS19690 at 4518.973 kb on - strand, within HSERO_RS19690 at 4519.211 kb on + strand at 4519.272 kb on - strand at 4519.456 kb on - strand, within HSERO_RS19695 at 4519.550 kb on + strand, within HSERO_RS19695 at 4519.550 kb on + strand, within HSERO_RS19695 at 4519.558 kb on - strand, within HSERO_RS19695 at 4519.604 kb on + strand, within HSERO_RS19695 at 4519.622 kb on + strand, within HSERO_RS19695 at 4519.721 kb on + strand at 4519.729 kb on - strand, within HSERO_RS19695 at 4519.908 kb on + strand, within HSERO_RS19695
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 4,516,603 + HSERO_RS19685 0.59 -0.8 4,516,658 - HSERO_RS19685 0.63 -0.2 4,516,847 - HSERO_RS19685 0.77 +0.2 4,516,938 - HSERO_RS19685 0.84 +0.2 4,516,938 - HSERO_RS19685 0.84 -0.1 4,516,987 + HSERO_RS19685 0.87 +0.2 4,517,005 + HSERO_RS19685 0.89 -0.3 4,517,007 - HSERO_RS19685 0.89 -0.3 4,517,140 + +0.5 4,517,192 + -0.0 4,517,283 - +0.3 4,517,331 - -0.1 4,517,412 - -0.3 4,517,659 + +0.2 4,517,712 + +0.1 4,517,753 - HSERO_RS19690 0.11 +0.7 4,517,814 + HSERO_RS19690 0.15 -0.2 4,517,972 - HSERO_RS19690 0.25 -0.2 4,517,999 + HSERO_RS19690 0.26 +0.1 4,518,007 - HSERO_RS19690 0.27 -0.1 4,518,195 - HSERO_RS19690 0.39 +1.0 4,518,200 + HSERO_RS19690 0.39 -0.4 4,518,237 + HSERO_RS19690 0.41 -0.3 4,518,245 - HSERO_RS19690 0.42 +0.1 4,518,245 - HSERO_RS19690 0.42 -0.4 4,518,351 + HSERO_RS19690 0.48 +0.2 4,518,457 - HSERO_RS19690 0.55 -0.5 4,518,635 - +2.0 4,518,776 - HSERO_RS19690 0.75 +0.2 4,518,892 + HSERO_RS19690 0.82 +1.0 4,518,892 + HSERO_RS19690 0.82 -0.1 4,518,892 + HSERO_RS19690 0.82 +0.2 4,518,973 - HSERO_RS19690 0.87 -0.5 4,519,211 + -1.0 4,519,272 - -0.0 4,519,456 - HSERO_RS19695 0.17 -0.7 4,519,550 + HSERO_RS19695 0.23 -1.0 4,519,550 + HSERO_RS19695 0.23 -0.7 4,519,558 - HSERO_RS19695 0.24 -0.0 4,519,604 + HSERO_RS19695 0.27 +0.2 4,519,622 + HSERO_RS19695 0.28 +0.4 4,519,721 + +1.2 4,519,729 - HSERO_RS19695 0.36 +0.0 4,519,908 + HSERO_RS19695 0.48 +0.1
Or see this region's nucleotide sequence