Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS19160 and HSERO_RS19165 are separated by 122 nucleotides HSERO_RS19165 and HSERO_RS19170 are separated by 61 nucleotides
HSERO_RS19160: HSERO_RS19160 - divalent cation transporter, at 4,396,032 to 4,396,742
_RS19160
HSERO_RS19165: HSERO_RS19165 - chemotaxis protein CheA, at 4,396,865 to 4,399,054
_RS19165
HSERO_RS19170: HSERO_RS19170 - chemotaxis protein, at 4,399,116 to 4,401,323
_RS19170
Position (kb) 4396
4397
4398
4399
4400 Strain fitness (log2 ratio) -1
0
1 at 4395.882 kb on - strand at 4395.979 kb on - strand at 4396.184 kb on - strand, within HSERO_RS19160 at 4396.391 kb on + strand, within HSERO_RS19160 at 4396.629 kb on - strand, within HSERO_RS19160 at 4396.642 kb on + strand, within HSERO_RS19160 at 4396.649 kb on - strand, within HSERO_RS19160 at 4396.814 kb on + strand at 4396.951 kb on - strand at 4396.991 kb on + strand at 4397.063 kb on + strand at 4397.322 kb on + strand, within HSERO_RS19165 at 4397.504 kb on + strand, within HSERO_RS19165 at 4397.628 kb on + strand, within HSERO_RS19165 at 4397.784 kb on - strand, within HSERO_RS19165 at 4397.847 kb on - strand, within HSERO_RS19165 at 4397.977 kb on + strand, within HSERO_RS19165 at 4397.977 kb on + strand, within HSERO_RS19165 at 4397.985 kb on - strand, within HSERO_RS19165 at 4397.989 kb on + strand, within HSERO_RS19165 at 4398.135 kb on - strand, within HSERO_RS19165 at 4398.200 kb on + strand at 4398.208 kb on - strand, within HSERO_RS19165 at 4398.313 kb on + strand, within HSERO_RS19165 at 4398.313 kb on + strand, within HSERO_RS19165 at 4398.321 kb on - strand, within HSERO_RS19165 at 4398.321 kb on - strand at 4398.321 kb on - strand, within HSERO_RS19165 at 4398.321 kb on - strand, within HSERO_RS19165 at 4398.381 kb on - strand, within HSERO_RS19165 at 4398.392 kb on + strand, within HSERO_RS19165 at 4398.412 kb on - strand, within HSERO_RS19165 at 4398.470 kb on + strand, within HSERO_RS19165 at 4398.539 kb on + strand, within HSERO_RS19165 at 4398.550 kb on + strand, within HSERO_RS19165 at 4398.850 kb on + strand at 4398.858 kb on - strand at 4399.031 kb on - strand at 4399.106 kb on + strand at 4399.306 kb on + strand at 4399.443 kb on + strand, within HSERO_RS19170 at 4399.514 kb on - strand, within HSERO_RS19170 at 4399.531 kb on + strand, within HSERO_RS19170 at 4399.916 kb on + strand, within HSERO_RS19170 at 4399.942 kb on - strand, within HSERO_RS19170 at 4399.995 kb on - strand, within HSERO_RS19170
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 4,395,882 - +0.4 4,395,979 - -0.5 4,396,184 - HSERO_RS19160 0.21 +0.4 4,396,391 + HSERO_RS19160 0.50 +0.1 4,396,629 - HSERO_RS19160 0.84 +0.1 4,396,642 + HSERO_RS19160 0.86 -0.1 4,396,649 - HSERO_RS19160 0.87 +0.0 4,396,814 + +0.2 4,396,951 - -0.0 4,396,991 + +0.1 4,397,063 + +0.0 4,397,322 + HSERO_RS19165 0.21 -1.7 4,397,504 + HSERO_RS19165 0.29 +0.1 4,397,628 + HSERO_RS19165 0.35 +0.1 4,397,784 - HSERO_RS19165 0.42 +0.1 4,397,847 - HSERO_RS19165 0.45 +0.1 4,397,977 + HSERO_RS19165 0.51 -1.3 4,397,977 + HSERO_RS19165 0.51 -0.1 4,397,985 - HSERO_RS19165 0.51 +0.3 4,397,989 + HSERO_RS19165 0.51 -0.6 4,398,135 - HSERO_RS19165 0.58 +0.1 4,398,200 + +0.4 4,398,208 - HSERO_RS19165 0.61 -0.1 4,398,313 + HSERO_RS19165 0.66 +0.1 4,398,313 + HSERO_RS19165 0.66 -0.3 4,398,321 - HSERO_RS19165 0.66 -0.1 4,398,321 - -0.6 4,398,321 - HSERO_RS19165 0.66 +0.0 4,398,321 - HSERO_RS19165 0.66 -0.6 4,398,381 - HSERO_RS19165 0.69 -0.2 4,398,392 + HSERO_RS19165 0.70 -0.2 4,398,412 - HSERO_RS19165 0.71 -0.3 4,398,470 + HSERO_RS19165 0.73 +0.3 4,398,539 + HSERO_RS19165 0.76 -0.0 4,398,550 + HSERO_RS19165 0.77 -0.6 4,398,850 + -0.7 4,398,858 - +0.1 4,399,031 - -0.3 4,399,106 + -1.2 4,399,306 + +0.0 4,399,443 + HSERO_RS19170 0.15 +0.8 4,399,514 - HSERO_RS19170 0.18 +0.1 4,399,531 + HSERO_RS19170 0.19 -0.2 4,399,916 + HSERO_RS19170 0.36 -0.5 4,399,942 - HSERO_RS19170 0.37 +0.0 4,399,995 - HSERO_RS19170 0.40 +0.5
Or see this region's nucleotide sequence