Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18735 and HSERO_RS18740 are separated by 180 nucleotides HSERO_RS18740 and HSERO_RS18745 are separated by 10 nucleotides HSERO_RS18745 and HSERO_RS18750 are separated by 343 nucleotides HSERO_RS18750 and HSERO_RS18755 are separated by 26 nucleotides
HSERO_RS18735: HSERO_RS18735 - recombinase RecA, at 4,300,068 to 4,301,540
_RS18735
HSERO_RS18740: HSERO_RS18740 - hypothetical protein, at 4,301,721 to 4,302,164
_RS18740
HSERO_RS18745: HSERO_RS18745 - methyl-accepting chemotaxis protein, at 4,302,175 to 4,303,725
_RS18745
HSERO_RS18750: HSERO_RS18750 - dehydrogenase, at 4,304,069 to 4,304,614
_RS18750
HSERO_RS18755: HSERO_RS18755 - choline dehydrogenase, at 4,304,641 to 4,306,272
_RS18755
Position (kb) 4302
4303
4304 Strain fitness (log2 ratio) -1
0
1 at 4301.269 kb on - strand, within HSERO_RS18735 at 4301.319 kb on - strand, within HSERO_RS18735 at 4301.529 kb on - strand at 4301.702 kb on + strand at 4301.928 kb on - strand, within HSERO_RS18740 at 4301.941 kb on - strand, within HSERO_RS18740 at 4302.334 kb on - strand, within HSERO_RS18745 at 4302.344 kb on - strand, within HSERO_RS18745 at 4302.443 kb on + strand, within HSERO_RS18745 at 4302.690 kb on - strand at 4302.869 kb on - strand, within HSERO_RS18745 at 4302.961 kb on + strand, within HSERO_RS18745 at 4302.986 kb on + strand, within HSERO_RS18745 at 4302.992 kb on + strand, within HSERO_RS18745 at 4303.214 kb on + strand, within HSERO_RS18745 at 4303.250 kb on + strand, within HSERO_RS18745 at 4303.288 kb on + strand, within HSERO_RS18745 at 4303.290 kb on + strand, within HSERO_RS18745 at 4303.399 kb on + strand, within HSERO_RS18745 at 4303.472 kb on - strand, within HSERO_RS18745 at 4303.586 kb on + strand at 4303.736 kb on + strand at 4303.956 kb on + strand at 4304.104 kb on + strand at 4304.124 kb on + strand at 4304.132 kb on - strand, within HSERO_RS18750 at 4304.157 kb on + strand, within HSERO_RS18750 at 4304.354 kb on - strand at 4304.414 kb on - strand, within HSERO_RS18750 at 4304.544 kb on + strand, within HSERO_RS18750 at 4304.625 kb on - strand at 4304.639 kb on - strand at 4304.723 kb on - strand at 4304.723 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 4,301,269 - HSERO_RS18735 0.82 +0.1 4,301,319 - HSERO_RS18735 0.85 -0.5 4,301,529 - -0.6 4,301,702 + +0.1 4,301,928 - HSERO_RS18740 0.47 -0.1 4,301,941 - HSERO_RS18740 0.50 +0.4 4,302,334 - HSERO_RS18745 0.10 -0.4 4,302,344 - HSERO_RS18745 0.11 -0.1 4,302,443 + HSERO_RS18745 0.17 +0.0 4,302,690 - -0.7 4,302,869 - HSERO_RS18745 0.45 +0.2 4,302,961 + HSERO_RS18745 0.51 +0.2 4,302,986 + HSERO_RS18745 0.52 +0.2 4,302,992 + HSERO_RS18745 0.53 +0.4 4,303,214 + HSERO_RS18745 0.67 -0.7 4,303,250 + HSERO_RS18745 0.69 +0.0 4,303,288 + HSERO_RS18745 0.72 -0.0 4,303,290 + HSERO_RS18745 0.72 -0.5 4,303,399 + HSERO_RS18745 0.79 +0.5 4,303,472 - HSERO_RS18745 0.84 -0.5 4,303,586 + -0.0 4,303,736 + +0.1 4,303,956 + -0.4 4,304,104 + -0.2 4,304,124 + -0.6 4,304,132 - HSERO_RS18750 0.12 +0.3 4,304,157 + HSERO_RS18750 0.16 +0.2 4,304,354 - +0.2 4,304,414 - HSERO_RS18750 0.63 -0.2 4,304,544 + HSERO_RS18750 0.87 +0.6 4,304,625 - +0.3 4,304,639 - +0.1 4,304,723 - +1.5 4,304,723 - +0.2
Or see this region's nucleotide sequence