Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18620 and HSERO_RS18625 are separated by 14 nucleotides HSERO_RS18625 and HSERO_RS18630 are separated by 299 nucleotides HSERO_RS18630 and HSERO_RS18635 are separated by 47 nucleotides
HSERO_RS18620: HSERO_RS18620 - methyl-accepting chemotaxis protein, at 4,271,794 to 4,273,509
_RS18620
HSERO_RS18625: HSERO_RS18625 - chemotaxis protein CheV, at 4,273,524 to 4,274,486
_RS18625
HSERO_RS18630: HSERO_RS18630 - hemerythrin, at 4,274,786 to 4,275,190
_RS18630
HSERO_RS18635: HSERO_RS18635 - signal transduction protein, at 4,275,238 to 4,276,872
_RS18635
Position (kb) 4273
4274
4275 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4272.581 kb on - strand, within HSERO_RS18620 at 4272.720 kb on + strand, within HSERO_RS18620 at 4272.816 kb on + strand, within HSERO_RS18620 at 4272.968 kb on + strand, within HSERO_RS18620 at 4272.981 kb on + strand, within HSERO_RS18620 at 4273.008 kb on + strand, within HSERO_RS18620 at 4273.057 kb on - strand, within HSERO_RS18620 at 4273.125 kb on - strand, within HSERO_RS18620 at 4273.190 kb on - strand, within HSERO_RS18620 at 4273.247 kb on - strand, within HSERO_RS18620 at 4273.349 kb on + strand at 4273.425 kb on - strand at 4273.493 kb on + strand at 4273.842 kb on + strand, within HSERO_RS18625 at 4274.028 kb on + strand, within HSERO_RS18625 at 4274.034 kb on + strand, within HSERO_RS18625 at 4274.302 kb on + strand, within HSERO_RS18625 at 4274.310 kb on - strand, within HSERO_RS18625 at 4274.329 kb on - strand, within HSERO_RS18625 at 4274.526 kb on + strand at 4274.642 kb on + strand at 4274.660 kb on - strand at 4274.660 kb on - strand at 4274.699 kb on + strand at 4274.754 kb on + strand at 4274.770 kb on - strand at 4275.062 kb on - strand, within HSERO_RS18630 at 4275.373 kb on + strand at 4275.431 kb on - strand, within HSERO_RS18635 at 4275.431 kb on - strand, within HSERO_RS18635
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 4,272,581 - HSERO_RS18620 0.46 +0.0 4,272,720 + HSERO_RS18620 0.54 -0.9 4,272,816 + HSERO_RS18620 0.60 -0.2 4,272,968 + HSERO_RS18620 0.68 -3.8 4,272,981 + HSERO_RS18620 0.69 -0.3 4,273,008 + HSERO_RS18620 0.71 -0.4 4,273,057 - HSERO_RS18620 0.74 +0.8 4,273,125 - HSERO_RS18620 0.78 +0.1 4,273,190 - HSERO_RS18620 0.81 -0.8 4,273,247 - HSERO_RS18620 0.85 -0.0 4,273,349 + -0.2 4,273,425 - +0.0 4,273,493 + -0.4 4,273,842 + HSERO_RS18625 0.33 +0.0 4,274,028 + HSERO_RS18625 0.52 +0.4 4,274,034 + HSERO_RS18625 0.53 -0.1 4,274,302 + HSERO_RS18625 0.81 -0.6 4,274,310 - HSERO_RS18625 0.82 +0.3 4,274,329 - HSERO_RS18625 0.84 -1.7 4,274,526 + +0.2 4,274,642 + +0.4 4,274,660 - +0.5 4,274,660 - +0.8 4,274,699 + +0.4 4,274,754 + +0.2 4,274,770 - +0.6 4,275,062 - HSERO_RS18630 0.68 +0.1 4,275,373 + -0.0 4,275,431 - HSERO_RS18635 0.12 -0.7 4,275,431 - HSERO_RS18635 0.12 -0.1
Or see this region's nucleotide sequence