Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18615 and HSERO_RS18620 are separated by 130 nucleotides HSERO_RS18620 and HSERO_RS18625 are separated by 14 nucleotides
HSERO_RS18615: HSERO_RS18615 - hypothetical protein, at 4,269,342 to 4,271,663
_RS18615
HSERO_RS18620: HSERO_RS18620 - methyl-accepting chemotaxis protein, at 4,271,794 to 4,273,509
_RS18620
HSERO_RS18625: HSERO_RS18625 - chemotaxis protein CheV, at 4,273,524 to 4,274,486
_RS18625
Position (kb) 4271
4272
4273
4274 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4270.815 kb on + strand, within HSERO_RS18615 at 4270.936 kb on - strand, within HSERO_RS18615 at 4270.944 kb on - strand, within HSERO_RS18615 at 4271.167 kb on - strand, within HSERO_RS18615 at 4271.167 kb on - strand, within HSERO_RS18615 at 4271.235 kb on - strand, within HSERO_RS18615 at 4271.279 kb on + strand, within HSERO_RS18615 at 4271.279 kb on + strand, within HSERO_RS18615 at 4271.419 kb on + strand, within HSERO_RS18615 at 4271.432 kb on + strand at 4271.618 kb on + strand at 4271.781 kb on - strand at 4271.888 kb on + strand at 4271.956 kb on - strand at 4271.972 kb on + strand, within HSERO_RS18620 at 4272.141 kb on + strand, within HSERO_RS18620 at 4272.141 kb on + strand, within HSERO_RS18620 at 4272.327 kb on - strand, within HSERO_RS18620 at 4272.381 kb on + strand, within HSERO_RS18620 at 4272.381 kb on + strand, within HSERO_RS18620 at 4272.397 kb on + strand, within HSERO_RS18620 at 4272.405 kb on - strand, within HSERO_RS18620 at 4272.458 kb on - strand, within HSERO_RS18620 at 4272.581 kb on - strand, within HSERO_RS18620 at 4272.720 kb on + strand, within HSERO_RS18620 at 4272.816 kb on + strand, within HSERO_RS18620 at 4272.968 kb on + strand, within HSERO_RS18620 at 4272.981 kb on + strand, within HSERO_RS18620 at 4273.008 kb on + strand, within HSERO_RS18620 at 4273.057 kb on - strand, within HSERO_RS18620 at 4273.125 kb on - strand, within HSERO_RS18620 at 4273.190 kb on - strand, within HSERO_RS18620 at 4273.247 kb on - strand, within HSERO_RS18620 at 4273.349 kb on + strand at 4273.425 kb on - strand at 4273.493 kb on + strand at 4273.842 kb on + strand, within HSERO_RS18625 at 4274.028 kb on + strand, within HSERO_RS18625 at 4274.034 kb on + strand, within HSERO_RS18625 at 4274.302 kb on + strand, within HSERO_RS18625 at 4274.310 kb on - strand, within HSERO_RS18625 at 4274.329 kb on - strand, within HSERO_RS18625
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 4,270,815 + HSERO_RS18615 0.63 +0.8 4,270,936 - HSERO_RS18615 0.69 +0.3 4,270,944 - HSERO_RS18615 0.69 -0.1 4,271,167 - HSERO_RS18615 0.79 +0.0 4,271,167 - HSERO_RS18615 0.79 -0.8 4,271,235 - HSERO_RS18615 0.82 -0.2 4,271,279 + HSERO_RS18615 0.83 -0.0 4,271,279 + HSERO_RS18615 0.83 +0.4 4,271,419 + HSERO_RS18615 0.89 +0.4 4,271,432 + -0.5 4,271,618 + +0.4 4,271,781 - -0.2 4,271,888 + +0.4 4,271,956 - +0.2 4,271,972 + HSERO_RS18620 0.10 +0.5 4,272,141 + HSERO_RS18620 0.20 +1.0 4,272,141 + HSERO_RS18620 0.20 +0.1 4,272,327 - HSERO_RS18620 0.31 -0.1 4,272,381 + HSERO_RS18620 0.34 -0.0 4,272,381 + HSERO_RS18620 0.34 -0.7 4,272,397 + HSERO_RS18620 0.35 -0.1 4,272,405 - HSERO_RS18620 0.36 +1.7 4,272,458 - HSERO_RS18620 0.39 -0.3 4,272,581 - HSERO_RS18620 0.46 +0.0 4,272,720 + HSERO_RS18620 0.54 -0.9 4,272,816 + HSERO_RS18620 0.60 -0.2 4,272,968 + HSERO_RS18620 0.68 -3.8 4,272,981 + HSERO_RS18620 0.69 -0.3 4,273,008 + HSERO_RS18620 0.71 -0.4 4,273,057 - HSERO_RS18620 0.74 +0.8 4,273,125 - HSERO_RS18620 0.78 +0.1 4,273,190 - HSERO_RS18620 0.81 -0.8 4,273,247 - HSERO_RS18620 0.85 -0.0 4,273,349 + -0.2 4,273,425 - +0.0 4,273,493 + -0.4 4,273,842 + HSERO_RS18625 0.33 +0.0 4,274,028 + HSERO_RS18625 0.52 +0.4 4,274,034 + HSERO_RS18625 0.53 -0.1 4,274,302 + HSERO_RS18625 0.81 -0.6 4,274,310 - HSERO_RS18625 0.82 +0.3 4,274,329 - HSERO_RS18625 0.84 -1.7
Or see this region's nucleotide sequence