Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS04235 and HSERO_RS04240 are separated by 482 nucleotides HSERO_RS04240 and HSERO_RS04245 are separated by 122 nucleotides HSERO_RS04245 and HSERO_RS04250 overlap by 4 nucleotides
HSERO_RS04235: HSERO_RS04235 - C4-dicarboxylate ABC transporter, at 929,653 to 931,677
_RS04235
HSERO_RS04240: HSERO_RS04240 - C4-dicarboxylate ABC transporter, at 932,160 to 933,164
_RS04240
HSERO_RS04245: HSERO_RS04245 - C4-dicarboxylate ABC transporter permease, at 933,287 to 933,847
_RS04245
HSERO_RS04250: HSERO_RS04250 - C4-dicarboxylate ABC transporter permease, at 933,844 to 935,124
_RS04250
Position (kb) 932
933
934 Strain fitness (log2 ratio) -1
0
1 at 931.184 kb on + strand, within HSERO_RS04235 at 931.634 kb on + strand at 931.688 kb on + strand at 931.750 kb on + strand at 931.758 kb on - strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.823 kb on - strand at 932.279 kb on + strand, within HSERO_RS04240 at 932.392 kb on + strand, within HSERO_RS04240 at 932.513 kb on - strand, within HSERO_RS04240 at 932.694 kb on + strand, within HSERO_RS04240 at 932.898 kb on + strand, within HSERO_RS04240 at 933.303 kb on + strand at 933.336 kb on - strand at 933.666 kb on + strand, within HSERO_RS04245 at 933.721 kb on + strand, within HSERO_RS04245 at 933.878 kb on + strand at 933.886 kb on - strand at 933.955 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 931,184 + HSERO_RS04235 0.76 -0.9 931,634 + -0.2 931,688 + +0.0 931,750 + -0.1 931,758 - +0.0 931,815 + +0.3 931,815 + +0.2 931,823 - +1.0 932,279 + HSERO_RS04240 0.12 +0.4 932,392 + HSERO_RS04240 0.23 +1.6 932,513 - HSERO_RS04240 0.35 +1.2 932,694 + HSERO_RS04240 0.53 +1.2 932,898 + HSERO_RS04240 0.73 +0.2 933,303 + +0.8 933,336 - +0.9 933,666 + HSERO_RS04245 0.68 +1.3 933,721 + HSERO_RS04245 0.77 +0.6 933,878 + +0.6 933,886 - +0.2 933,955 - +1.0
Or see this region's nucleotide sequence