Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02675 and HSERO_RS02680 are separated by 323 nucleotides HSERO_RS02680 and HSERO_RS02685 are separated by 64 nucleotides
HSERO_RS02675: HSERO_RS02675 - transporter, at 589,091 to 590,545
_RS02675
HSERO_RS02680: HSERO_RS02680 - methyl-accepting chemotaxis protein, at 590,869 to 592,512
_RS02680
HSERO_RS02685: HSERO_RS02685 - ABC transporter ATPase, at 592,577 to 593,920
_RS02685
Position (kb) 590
591
592
593 Strain fitness (log2 ratio) -1
0
1 at 589.967 kb on + strand, within HSERO_RS02675 at 590.002 kb on - strand, within HSERO_RS02675 at 590.046 kb on + strand, within HSERO_RS02675 at 590.168 kb on - strand, within HSERO_RS02675 at 590.199 kb on - strand, within HSERO_RS02675 at 590.224 kb on + strand, within HSERO_RS02675 at 590.256 kb on - strand, within HSERO_RS02675 at 590.264 kb on - strand, within HSERO_RS02675 at 590.285 kb on + strand, within HSERO_RS02675 at 590.318 kb on - strand, within HSERO_RS02675 at 590.689 kb on - strand at 590.689 kb on - strand at 590.743 kb on + strand at 590.751 kb on - strand at 590.830 kb on - strand at 590.899 kb on + strand at 590.953 kb on + strand at 590.958 kb on - strand at 590.958 kb on - strand at 590.991 kb on - strand at 591.074 kb on + strand, within HSERO_RS02680 at 591.177 kb on + strand, within HSERO_RS02680 at 591.264 kb on + strand, within HSERO_RS02680 at 591.325 kb on + strand, within HSERO_RS02680 at 591.483 kb on - strand, within HSERO_RS02680 at 591.543 kb on - strand, within HSERO_RS02680 at 591.651 kb on - strand, within HSERO_RS02680 at 591.740 kb on - strand, within HSERO_RS02680 at 591.916 kb on + strand, within HSERO_RS02680 at 591.916 kb on + strand at 591.945 kb on - strand, within HSERO_RS02680 at 592.201 kb on + strand, within HSERO_RS02680 at 592.221 kb on - strand, within HSERO_RS02680 at 592.267 kb on + strand, within HSERO_RS02680 at 592.293 kb on - strand, within HSERO_RS02680 at 592.337 kb on - strand, within HSERO_RS02680 at 592.337 kb on - strand, within HSERO_RS02680 at 592.351 kb on - strand at 592.353 kb on + strand at 592.361 kb on - strand at 592.439 kb on - strand at 592.470 kb on + strand at 592.514 kb on - strand at 592.514 kb on - strand at 592.530 kb on + strand at 592.530 kb on + strand at 592.540 kb on + strand at 592.545 kb on + strand at 592.578 kb on - strand at 592.816 kb on + strand, within HSERO_RS02685 at 592.946 kb on - strand, within HSERO_RS02685 at 592.999 kb on + strand, within HSERO_RS02685 at 592.999 kb on + strand, within HSERO_RS02685 at 593.135 kb on + strand, within HSERO_RS02685 at 593.142 kb on - strand, within HSERO_RS02685 at 593.210 kb on + strand, within HSERO_RS02685 at 593.428 kb on - strand, within HSERO_RS02685 at 593.435 kb on - strand, within HSERO_RS02685 at 593.486 kb on - strand, within HSERO_RS02685
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 589,967 + HSERO_RS02675 0.60 +0.2 590,002 - HSERO_RS02675 0.63 -0.2 590,046 + HSERO_RS02675 0.66 -1.0 590,168 - HSERO_RS02675 0.74 +0.1 590,199 - HSERO_RS02675 0.76 -0.0 590,224 + HSERO_RS02675 0.78 +0.7 590,256 - HSERO_RS02675 0.80 +0.5 590,264 - HSERO_RS02675 0.81 +0.1 590,285 + HSERO_RS02675 0.82 +0.2 590,318 - HSERO_RS02675 0.84 -0.2 590,689 - -0.9 590,689 - +0.2 590,743 + +0.2 590,751 - +0.4 590,830 - -0.2 590,899 + -0.8 590,953 + -1.4 590,958 - -0.0 590,958 - +0.2 590,991 - -0.8 591,074 + HSERO_RS02680 0.12 -0.2 591,177 + HSERO_RS02680 0.19 +0.3 591,264 + HSERO_RS02680 0.24 +0.1 591,325 + HSERO_RS02680 0.28 -0.5 591,483 - HSERO_RS02680 0.37 +0.2 591,543 - HSERO_RS02680 0.41 +0.3 591,651 - HSERO_RS02680 0.48 -0.1 591,740 - HSERO_RS02680 0.53 -0.9 591,916 + HSERO_RS02680 0.64 -0.1 591,916 + -0.9 591,945 - HSERO_RS02680 0.65 +0.2 592,201 + HSERO_RS02680 0.81 +1.5 592,221 - HSERO_RS02680 0.82 -0.3 592,267 + HSERO_RS02680 0.85 -0.1 592,293 - HSERO_RS02680 0.87 +0.5 592,337 - HSERO_RS02680 0.89 -0.3 592,337 - HSERO_RS02680 0.89 +0.5 592,351 - +0.4 592,353 + -0.1 592,361 - -0.0 592,439 - -0.2 592,470 + +0.4 592,514 - -0.1 592,514 - -0.1 592,530 + +0.7 592,530 + +0.3 592,540 + +0.3 592,545 + +0.1 592,578 - -0.1 592,816 + HSERO_RS02685 0.18 -0.3 592,946 - HSERO_RS02685 0.27 +0.1 592,999 + HSERO_RS02685 0.31 -0.3 592,999 + HSERO_RS02685 0.31 +1.1 593,135 + HSERO_RS02685 0.42 -0.1 593,142 - HSERO_RS02685 0.42 +0.2 593,210 + HSERO_RS02685 0.47 +0.3 593,428 - HSERO_RS02685 0.63 +0.3 593,435 - HSERO_RS02685 0.64 -0.1 593,486 - HSERO_RS02685 0.68 +0.9
Or see this region's nucleotide sequence