Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02605 and HSERO_RS02610 are separated by 3 nucleotides HSERO_RS02610 and HSERO_RS02615 are separated by 76 nucleotides HSERO_RS02615 and HSERO_RS02620 are separated by 251 nucleotides
HSERO_RS02605: HSERO_RS02605 - LysR family transcriptional regulator, at 570,586 to 571,434
_RS02605
HSERO_RS02610: HSERO_RS02610 - hypothetical protein, at 571,438 to 571,836
_RS02610
HSERO_RS02615: HSERO_RS02615 - polymerase, at 571,913 to 573,550
_RS02615
HSERO_RS02620: HSERO_RS02620 - cobalt transporter, at 573,802 to 574,719
_RS02620
Position (kb) 571
572
573
574 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 570.968 kb on + strand, within HSERO_RS02605 at 570.975 kb on + strand, within HSERO_RS02605 at 570.984 kb on - strand, within HSERO_RS02605 at 570.986 kb on + strand, within HSERO_RS02605 at 570.994 kb on - strand, within HSERO_RS02605 at 571.004 kb on - strand, within HSERO_RS02605 at 571.297 kb on - strand, within HSERO_RS02605 at 571.365 kb on + strand at 571.448 kb on + strand at 571.567 kb on + strand, within HSERO_RS02610 at 571.780 kb on - strand, within HSERO_RS02610 at 571.949 kb on + strand at 571.967 kb on + strand at 571.993 kb on + strand at 572.031 kb on + strand at 572.039 kb on - strand at 572.074 kb on - strand at 572.120 kb on + strand, within HSERO_RS02615 at 572.128 kb on - strand, within HSERO_RS02615 at 572.238 kb on - strand, within HSERO_RS02615 at 572.366 kb on + strand, within HSERO_RS02615 at 572.455 kb on + strand, within HSERO_RS02615 at 572.465 kb on + strand, within HSERO_RS02615 at 572.589 kb on + strand, within HSERO_RS02615 at 572.661 kb on - strand, within HSERO_RS02615 at 572.715 kb on - strand, within HSERO_RS02615 at 572.747 kb on - strand, within HSERO_RS02615 at 572.754 kb on - strand, within HSERO_RS02615 at 572.800 kb on + strand, within HSERO_RS02615 at 572.810 kb on + strand, within HSERO_RS02615 at 572.833 kb on + strand, within HSERO_RS02615 at 572.833 kb on + strand, within HSERO_RS02615 at 572.911 kb on - strand, within HSERO_RS02615 at 572.911 kb on - strand, within HSERO_RS02615 at 573.332 kb on - strand, within HSERO_RS02615 at 573.475 kb on - strand at 573.657 kb on + strand at 573.777 kb on + strand at 573.778 kb on + strand at 573.832 kb on - strand at 573.935 kb on - strand, within HSERO_RS02620 at 574.017 kb on - strand, within HSERO_RS02620 at 574.027 kb on - strand, within HSERO_RS02620 at 574.037 kb on - strand, within HSERO_RS02620 at 574.106 kb on - strand, within HSERO_RS02620 at 574.195 kb on + strand, within HSERO_RS02620 at 574.286 kb on - strand, within HSERO_RS02620 at 574.363 kb on - strand, within HSERO_RS02620
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 570,968 + HSERO_RS02605 0.45 +0.1 570,975 + HSERO_RS02605 0.46 -0.1 570,984 - HSERO_RS02605 0.47 -0.1 570,986 + HSERO_RS02605 0.47 -0.2 570,994 - HSERO_RS02605 0.48 -0.7 571,004 - HSERO_RS02605 0.49 +0.1 571,297 - HSERO_RS02605 0.84 -0.7 571,365 + +0.0 571,448 + -0.1 571,567 + HSERO_RS02610 0.32 +0.7 571,780 - HSERO_RS02610 0.86 +0.2 571,949 + -1.4 571,967 + -0.8 571,993 + -2.6 572,031 + -1.1 572,039 - -1.8 572,074 - -1.6 572,120 + HSERO_RS02615 0.13 -0.9 572,128 - HSERO_RS02615 0.13 -1.0 572,238 - HSERO_RS02615 0.20 -1.6 572,366 + HSERO_RS02615 0.28 -1.8 572,455 + HSERO_RS02615 0.33 -2.0 572,465 + HSERO_RS02615 0.34 -2.5 572,589 + HSERO_RS02615 0.41 -1.6 572,661 - HSERO_RS02615 0.46 -2.3 572,715 - HSERO_RS02615 0.49 -1.4 572,747 - HSERO_RS02615 0.51 -1.3 572,754 - HSERO_RS02615 0.51 -1.7 572,800 + HSERO_RS02615 0.54 -1.5 572,810 + HSERO_RS02615 0.55 -0.9 572,833 + HSERO_RS02615 0.56 -1.7 572,833 + HSERO_RS02615 0.56 +0.1 572,911 - HSERO_RS02615 0.61 -1.7 572,911 - HSERO_RS02615 0.61 -0.5 573,332 - HSERO_RS02615 0.87 -3.8 573,475 - -2.1 573,657 + -1.8 573,777 + +0.4 573,778 + -0.2 573,832 - -0.3 573,935 - HSERO_RS02620 0.14 +0.2 574,017 - HSERO_RS02620 0.23 -0.3 574,027 - HSERO_RS02620 0.25 +0.1 574,037 - HSERO_RS02620 0.26 -0.3 574,106 - HSERO_RS02620 0.33 -0.0 574,195 + HSERO_RS02620 0.43 -0.3 574,286 - HSERO_RS02620 0.53 -0.1 574,363 - HSERO_RS02620 0.61 -0.4
Or see this region's nucleotide sequence