Experiment: L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS00140 and HSERO_RS00145 are separated by 51 nucleotides HSERO_RS00145 and HSERO_RS00150 are separated by 42 nucleotides HSERO_RS00150 and HSERO_RS00155 are separated by 231 nucleotides HSERO_RS00155 and HSERO_RS00160 are separated by 65 nucleotides
HSERO_RS00140: HSERO_RS00140 - hypothetical protein, at 39,640 to 40,713
_RS00140
HSERO_RS00145: HSERO_RS00145 - hypothetical protein, at 40,765 to 41,031
_RS00145
HSERO_RS00150: HSERO_RS00150 - chemotaxis protein, at 41,074 to 42,678
_RS00150
HSERO_RS00155: HSERO_RS00155 - ABC transporter, at 42,910 to 43,548
_RS00155
HSERO_RS00160: HSERO_RS00160 - hypothetical protein, at 43,614 to 43,865
_RS00160
Position (kb) 41
42
43 Strain fitness (log2 ratio) -1
0
1 at 40.080 kb on + strand, within HSERO_RS00140 at 40.088 kb on - strand, within HSERO_RS00140 at 40.088 kb on - strand, within HSERO_RS00140 at 40.204 kb on - strand, within HSERO_RS00140 at 40.422 kb on + strand, within HSERO_RS00140 at 40.453 kb on - strand at 40.806 kb on + strand, within HSERO_RS00145 at 40.829 kb on - strand, within HSERO_RS00145 at 40.954 kb on + strand, within HSERO_RS00145 at 41.078 kb on - strand at 41.096 kb on - strand at 41.304 kb on - strand, within HSERO_RS00150 at 41.523 kb on - strand, within HSERO_RS00150 at 41.621 kb on - strand, within HSERO_RS00150 at 41.755 kb on + strand, within HSERO_RS00150 at 42.277 kb on + strand, within HSERO_RS00150 at 42.431 kb on + strand, within HSERO_RS00150 at 42.571 kb on - strand at 42.607 kb on - strand at 42.659 kb on - strand at 42.794 kb on + strand at 42.865 kb on - strand at 42.923 kb on + strand at 43.059 kb on - strand, within HSERO_RS00155 at 43.403 kb on + strand, within HSERO_RS00155 at 43.411 kb on - strand, within HSERO_RS00155 at 43.437 kb on - strand, within HSERO_RS00155 at 43.476 kb on + strand, within HSERO_RS00155 at 43.476 kb on + strand, within HSERO_RS00155 at 43.538 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days remove 40,080 + HSERO_RS00140 0.41 +0.4 40,088 - HSERO_RS00140 0.42 -0.5 40,088 - HSERO_RS00140 0.42 +1.0 40,204 - HSERO_RS00140 0.53 -0.3 40,422 + HSERO_RS00140 0.73 -0.2 40,453 - -0.8 40,806 + HSERO_RS00145 0.15 -0.2 40,829 - HSERO_RS00145 0.24 +0.6 40,954 + HSERO_RS00145 0.71 +0.0 41,078 - -0.4 41,096 - -0.9 41,304 - HSERO_RS00150 0.14 -0.2 41,523 - HSERO_RS00150 0.28 -0.0 41,621 - HSERO_RS00150 0.34 +0.0 41,755 + HSERO_RS00150 0.42 +0.4 42,277 + HSERO_RS00150 0.75 -0.6 42,431 + HSERO_RS00150 0.85 -0.5 42,571 - -0.1 42,607 - -0.1 42,659 - -0.4 42,794 + -0.2 42,865 - -0.1 42,923 + -0.1 43,059 - HSERO_RS00155 0.23 +0.0 43,403 + HSERO_RS00155 0.77 -0.3 43,411 - HSERO_RS00155 0.78 -0.2 43,437 - HSERO_RS00155 0.82 +0.4 43,476 + HSERO_RS00155 0.89 -0.5 43,476 + HSERO_RS00155 0.89 -0.4 43,538 - +0.3
Or see this region's nucleotide sequence