Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03228

Experiment: PYE 0.5x 30C survival rep1 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep1 28 days
3,391,282	+		CCNA_03227	0.65	-0.9
3,391,282	+		CCNA_03227	0.65	-1.4
3,391,288	-		CCNA_03227	0.65	+1.9
3,391,290	-		CCNA_03227	0.65	+1.5
3,391,290	-		CCNA_03227	0.65	+3.9
3,391,290	-		CCNA_03227	0.65	-0.3
3,391,309	-		CCNA_03227	0.66	+0.2
3,391,314	-		CCNA_03227	0.66	+0.3
3,391,336	+		CCNA_03227	0.67	-0.9
3,391,343	+		CCNA_03227	0.67	-1.6
3,391,345	-		CCNA_03227	0.67	-0.0
3,391,350	-		CCNA_03227	0.68	+2.9
3,391,351	-		CCNA_03227	0.68	+1.1
3,391,355	+		CCNA_03227	0.68	+1.1
3,391,355	+		CCNA_03227	0.68	+0.4
3,391,363	-		CCNA_03227	0.68	-0.7
3,391,363	-		CCNA_03227	0.68	-2.3
3,391,363	-		CCNA_03227	0.68	-0.9
3,391,423	+		CCNA_03227	0.71	-1.6
3,391,423	+		CCNA_03227	0.71	+0.2
3,391,423	+		CCNA_03227	0.71	-0.2
3,391,431	-		CCNA_03227	0.71	+2.2
3,391,431	-		CCNA_03227	0.71	+0.6
3,391,474	+		CCNA_03227	0.73	-0.3
3,391,482	-		CCNA_03227	0.73	+0.0
3,391,489	+		CCNA_03227	0.73	+1.9
3,391,497	-		CCNA_03227	0.74	-0.6
3,391,526	-		CCNA_03227	0.75	+1.5
3,391,529	+				+1.9
3,391,539	-		CCNA_03227	0.75	-0.7
3,391,558	+		CCNA_03227	0.76	+0.6
3,391,558	+		CCNA_03227	0.76	-1.4
3,391,563	+		CCNA_03227	0.76	-1.8
3,391,571	-		CCNA_03227	0.77	+0.2
3,391,571	-		CCNA_03227	0.77	-0.4
3,391,571	-		CCNA_03227	0.77	+1.5
3,391,580	+		CCNA_03227	0.77	+1.1
3,391,587	-		CCNA_03227	0.77	-0.2
3,391,605	+		CCNA_03227	0.78	+0.7
3,391,628	-		CCNA_03227	0.79	-0.4
3,391,635	+		CCNA_03227	0.79	-0.1
3,391,635	+		CCNA_03227	0.79	-1.7
3,391,643	-		CCNA_03227	0.80	-0.1
3,391,650	-		CCNA_03227	0.80	-0.0
3,391,661	+		CCNA_03227	0.81	-1.4
3,391,661	-		CCNA_03227	0.81	-0.5
3,391,695	-		CCNA_03227	0.82	-1.1
3,391,700	-		CCNA_03227	0.82	+1.6
3,391,711	-		CCNA_03227	0.83	-3.5
3,391,718	-		CCNA_03227	0.83	+1.0
3,391,729	+		CCNA_03227	0.83	+2.5
3,391,732	+		CCNA_03227	0.84	-0.9
3,391,735	-		CCNA_03227	0.84	+0.2
3,391,823	+		CCNA_03227	0.87	-1.5
3,391,829	+		CCNA_03227	0.88	-0.1
3,391,831	-		CCNA_03227	0.88	-1.1
3,391,831	-		CCNA_03227	0.88	-0.4
3,391,846	+		CCNA_03227	0.88	+1.9
3,391,854	-		CCNA_03227	0.89	+0.0
3,391,861	+		CCNA_03227	0.89	-0.9
3,391,862	-		CCNA_03227	0.89	+1.0
3,391,869	-		CCNA_03227	0.89	-0.4
3,391,879	-		CCNA_03227	0.90	+1.1
3,391,880	-		CCNA_03227	0.90	+0.8
3,391,880	-		CCNA_03227	0.90	+0.6
3,391,915	+				-1.1
3,391,915	+				-0.6
3,391,921	+				+0.1
3,391,945	-				+4.7
3,391,987	-				+0.3
3,391,987	-				+1.9
3,391,987	-				+0.2
3,392,020	+				-1.7
3,392,020	+				-2.5
3,392,023	-				+0.9
3,392,023	-				+0.5
3,392,023	-				+1.3
3,392,030	+				-2.6
3,392,043	-				+0.9
3,392,046	+				-1.4
3,392,064	-				-0.2
3,392,066	+				-0.4
3,392,082	+				-0.1
3,392,082	+				-2.7
3,392,090	-				+0.4
3,392,108	+				-0.9
3,392,135	-				+1.4
3,392,145	-				+1.7
3,392,145	-				+0.7
3,392,152	-				+0.6
3,392,241	+				-3.0
3,392,249	-				+0.7
3,392,249	-				+1.2
3,392,281	+				-1.3
3,392,324	-				-0.1
3,392,343	+				-2.3
3,392,381	+				+0.5
3,392,389	-				-0.4
3,392,389	-				+0.0
3,392,438	+				+1.2
3,392,460	+		CCNA_03228	0.10	+0.9
3,392,478	-		CCNA_03228	0.11	-2.0
3,392,505	+		CCNA_03228	0.12	+0.9
3,392,505	+		CCNA_03228	0.12	-2.4
3,392,529	+		CCNA_03228	0.14	+1.9
3,392,561	+		CCNA_03228	0.15	+1.9
3,392,600	+		CCNA_03228	0.17	+0.1
3,392,608	-		CCNA_03228	0.17	+1.6
3,392,608	-		CCNA_03228	0.17	+1.5
3,392,613	+		CCNA_03228	0.18	-0.3
3,392,631	+		CCNA_03228	0.19	-0.4
3,392,639	-		CCNA_03228	0.19	-0.1
3,392,697	+		CCNA_03228	0.22	+0.3
3,392,702	+		CCNA_03228	0.22	-1.3
3,392,705	-		CCNA_03228	0.22	+0.1
3,392,710	-		CCNA_03228	0.22	-3.4
3,392,710	-		CCNA_03228	0.22	-2.7
3,392,710	-		CCNA_03228	0.22	+1.3
3,392,710	-		CCNA_03228	0.22	+0.7
3,392,711	+		CCNA_03228	0.23	+2.3
3,392,720	-		CCNA_03228	0.23	+1.9
3,392,720	-		CCNA_03228	0.23	-0.7
3,392,725	-		CCNA_03228	0.23	-1.3
3,392,760	-		CCNA_03228	0.25	+0.1
3,392,770	+		CCNA_03228	0.25	+0.2
3,392,770	+		CCNA_03228	0.25	+0.9
3,392,780	+		CCNA_03228	0.26	+1.2
3,392,788	-		CCNA_03228	0.26	-1.8
3,392,800	-		CCNA_03228	0.27	+0.9
3,392,810	-		CCNA_03228	0.27	+0.3
3,392,815	+		CCNA_03228	0.28	-0.3
3,392,823	-		CCNA_03228	0.28	-2.3
3,392,859	+		CCNA_03228	0.30	-1.1
3,392,867	-		CCNA_03228	0.30	+1.7
3,392,941	+		CCNA_03228	0.34	-0.7
3,392,956	+		CCNA_03228	0.35	-0.9
3,392,963	-		CCNA_03228	0.35	-1.4
3,392,963	-		CCNA_03228	0.35	-0.3
3,392,964	-		CCNA_03228	0.35	+1.6
3,392,978	-		CCNA_03228	0.36	-1.4
3,392,983	-		CCNA_03228	0.36	+0.1
3,392,989	-		CCNA_03228	0.36	-0.3
3,392,991	+				-0.4
3,393,025	+		CCNA_03228	0.38	+0.0
3,393,025	+		CCNA_03228	0.38	-0.5
3,393,030	+		CCNA_03228	0.38	-1.3
3,393,030	+		CCNA_03228	0.38	-0.8
3,393,030	+		CCNA_03228	0.38	+0.5
3,393,033	-		CCNA_03228	0.38	-0.1
3,393,038	-		CCNA_03228	0.39	+2.5
3,393,038	-		CCNA_03228	0.39	+1.4
3,393,038	-		CCNA_03228	0.39	-0.1
3,393,038	-		CCNA_03228	0.39	+0.2
3,393,038	-		CCNA_03228	0.39	-0.5
3,393,038	-		CCNA_03228	0.39	+0.9
3,393,038	-		CCNA_03228	0.39	-0.3
3,393,038	-		CCNA_03228	0.39	+0.1
3,393,038	-		CCNA_03228	0.39	+1.6
3,393,061	+		CCNA_03228	0.40	+0.4
3,393,069	-		CCNA_03228	0.40	+1.1
3,393,073	+		CCNA_03228	0.40	+2.2
3,393,078	+		CCNA_03228	0.41	+1.3
3,393,086	-		CCNA_03228	0.41	+1.1
3,393,105	-		CCNA_03228	0.42	+0.8
3,393,107	-		CCNA_03228	0.42	+0.2
3,393,112	+		CCNA_03228	0.42	+0.1
3,393,151	+		CCNA_03228	0.44	+0.3
3,393,156	+		CCNA_03228	0.45	+3.5
3,393,156	+		CCNA_03228	0.45	+0.6
3,393,172	+		CCNA_03228	0.45	-2.6
3,393,172	+		CCNA_03228	0.45	-2.3
3,393,172	+		CCNA_03228	0.45	-0.2
3,393,172	+		CCNA_03228	0.45	-0.9
3,393,180	-		CCNA_03228	0.46	+0.2
3,393,180	-		CCNA_03228	0.46	+0.7
3,393,180	-		CCNA_03228	0.46	-0.5
3,393,185	-		CCNA_03228	0.46	-0.3
3,393,192	-		CCNA_03228	0.46	+0.5
3,393,213	+		CCNA_03228	0.47	+0.5
3,393,213	+		CCNA_03228	0.47	-0.1
3,393,213	+		CCNA_03228	0.47	+0.5
3,393,216	-		CCNA_03228	0.47	+0.5
3,393,221	-		CCNA_03228	0.48	+0.5
3,393,221	-		CCNA_03228	0.48	-0.1
3,393,221	-		CCNA_03228	0.48	+0.9
3,393,221	-		CCNA_03228	0.48	-0.2
3,393,242	+		CCNA_03228	0.49	-1.6
3,393,243	+		CCNA_03228	0.49	-0.9
3,393,301	+		CCNA_03228	0.52	-0.7
3,393,301	+		CCNA_03228	0.52	-3.2
3,393,301	+		CCNA_03228	0.52	-1.1
3,393,301	+		CCNA_03228	0.52	+0.7
3,393,301	+		CCNA_03228	0.52	-1.2
3,393,301	+		CCNA_03228	0.52	-1.4
3,393,301	+		CCNA_03228	0.52	+0.3
3,393,301	+		CCNA_03228	0.52	-0.1
3,393,301	+		CCNA_03228	0.52	-0.2
3,393,301	+		CCNA_03228	0.52	-2.2
3,393,309	-		CCNA_03228	0.52	+0.6
3,393,309	-		CCNA_03228	0.52	+1.4
3,393,309	-		CCNA_03228	0.52	+3.5
3,393,309	-		CCNA_03228	0.52	+0.6
3,393,309	-		CCNA_03228	0.52	+0.9
3,393,309	-		CCNA_03228	0.52	+0.5
3,393,309	-		CCNA_03228	0.52	+0.2
3,393,309	-		CCNA_03228	0.52	+0.1
3,393,309	-		CCNA_03228	0.52	+0.0
3,393,309	-		CCNA_03228	0.52	-0.1
3,393,309	-		CCNA_03228	0.52	+0.3
3,393,312	+		CCNA_03228	0.52	-1.2
3,393,312	+		CCNA_03228	0.52	+0.3
3,393,320	-		CCNA_03228	0.53	+1.4
3,393,321	+		CCNA_03228	0.53	+0.3
3,393,321	+		CCNA_03228	0.53	-0.1
3,393,322	+		CCNA_03228	0.53	-0.9
3,393,325	-		CCNA_03228	0.53	+0.3
3,393,329	-		CCNA_03228	0.53	+1.7
3,393,340	+		CCNA_03228	0.54	+1.9
3,393,366	-		CCNA_03228	0.55	+0.3
3,393,366	-		CCNA_03228	0.55	+1.0
3,393,370	-		CCNA_03228	0.55	+0.7
3,393,397	+		CCNA_03228	0.56	-1.8
3,393,401	+		CCNA_03228	0.57	+0.8
3,393,430	+		CCNA_03228	0.58	+0.6
3,393,440	+		CCNA_03228	0.59	-0.6
3,393,440	+		CCNA_03228	0.59	+1.1
3,393,448	-		CCNA_03228	0.59	+0.4
3,393,462	-		CCNA_03228	0.60	+0.6
3,393,494	-		CCNA_03228	0.61	+0.6
3,393,533	+		CCNA_03228	0.63	+0.2
3,393,560	+		CCNA_03228	0.64	-0.3
3,393,564	-		CCNA_03228	0.65	+0.0
3,393,583	+		CCNA_03228	0.66	+0.3
3,393,583	+		CCNA_03228	0.66	-0.8
3,393,591	-		CCNA_03228	0.66	+3.2
3,393,591	-		CCNA_03228	0.66	+0.5
3,393,617	-		CCNA_03228	0.67	+0.9
3,393,645	+		CCNA_03228	0.69	+1.9
3,393,651	+		CCNA_03228	0.69	+0.3
3,393,656	+		CCNA_03228	0.69	-0.6
3,393,656	+		CCNA_03228	0.69	+0.9
3,393,656	+		CCNA_03228	0.69	+0.9
3,393,656	+		CCNA_03228	0.69	+2.6
3,393,656	+		CCNA_03228	0.69	-1.7
3,393,664	-		CCNA_03228	0.70	-0.8
3,393,664	-		CCNA_03228	0.70	-0.2
3,393,667	-		CCNA_03228	0.70	-0.2
3,393,669	+		CCNA_03228	0.70	-0.3
3,393,677	-		CCNA_03228	0.70	-0.7
3,393,677	-		CCNA_03228	0.70	-0.0
3,393,677	-		CCNA_03228	0.70	+0.2
3,393,757	+		CCNA_03228	0.74	-0.1
3,393,757	+		CCNA_03228	0.74	+0.4
3,393,757	+		CCNA_03228	0.74	-1.7
3,393,765	-				-0.5
3,393,765	-		CCNA_03228	0.75	-0.7
3,393,765	-		CCNA_03228	0.75	+0.5
3,393,782	+		CCNA_03228	0.75	+0.3
3,393,811	-		CCNA_03228	0.77	-0.9
3,393,814	-		CCNA_03228	0.77	+0.1
3,393,826	+		CCNA_03228	0.78	+0.9
3,393,826	-		CCNA_03228	0.78	-1.1
3,393,905	+		CCNA_03228	0.82	-0.1
3,393,913	-		CCNA_03228	0.82	+0.9
3,393,921	-		CCNA_03228	0.82	+1.0
3,393,934	+		CCNA_03228	0.83	+1.1
3,393,934	+		CCNA_03228	0.83	+0.9
3,393,942	-		CCNA_03228	0.83	-0.3
3,393,947	-		CCNA_03228	0.84	-0.0
3,393,952	-		CCNA_03228	0.84	+1.4
3,393,952	-		CCNA_03228	0.84	+0.4
3,393,958	-		CCNA_03228	0.84	-0.1
3,393,968	+		CCNA_03228	0.85	-0.3
3,393,968	+		CCNA_03228	0.85	-0.5
3,394,020	+		CCNA_03228	0.87	-0.6
3,394,027	-		CCNA_03228	0.88	+0.2
3,394,045	+		CCNA_03228	0.88	-0.2
3,394,057	+		CCNA_03228	0.89	-1.3
3,394,065	-		CCNA_03228	0.89	+0.8
3,394,065	-		CCNA_03228	0.89	+0.3
3,394,065	-		CCNA_03228	0.89	+1.7
3,394,107	-				-0.9
3,394,123	+				+1.3
3,394,132	+				+2.2
3,394,161	+				-2.0
3,394,167	-				+1.6
3,394,171	+				+0.8
3,394,179	-				+1.1
3,394,204	+				+0.5
3,394,212	-				+0.5
3,394,280	+				+1.0
3,394,280	+				+1.6
3,394,280	+				-0.2
3,394,288	-				+0.3
3,394,288	-				-0.6
3,394,288	-				+0.1
3,394,288	-				-0.5
3,394,288	-				+1.8
3,394,293	+				-0.5
3,394,301	-				+0.3
3,394,302	-				+1.0
3,394,307	-				-0.8
3,394,312	+				-0.5
3,394,324	+				+0.9
3,394,377	+				-2.4
3,394,445	+				+0.9
3,394,455	-				+0.0
3,394,473	+				+0.6
3,394,534	+		CCNA_03229	0.13	-1.9
3,394,534	+		CCNA_03229	0.13	+0.9
3,394,534	+		CCNA_03229	0.13	+0.9
3,394,534	+		CCNA_03229	0.13	-1.5
3,394,541	-		CCNA_03229	0.14	-0.9
3,394,542	-		CCNA_03229	0.14	-0.8
3,394,542	-		CCNA_03229	0.14	+1.9
3,394,542	-		CCNA_03229	0.14	-0.5
3,394,542	-		CCNA_03229	0.14	-1.4
3,394,547	-		CCNA_03229	0.14	-1.3
3,394,547	-		CCNA_03229	0.14	-4.3
3,394,593	+		CCNA_03229	0.18	+0.8
3,394,593	+		CCNA_03229	0.18	-0.7
3,394,600	+		CCNA_03229	0.19	-0.7
3,394,601	-		CCNA_03229	0.19	-0.7
3,394,601	-		CCNA_03229	0.19	+1.3
3,394,601	-		CCNA_03229	0.19	-1.3
3,394,608	-		CCNA_03229	0.19	-0.1
3,394,612	+		CCNA_03229	0.20	-1.1
3,394,617	-		CCNA_03229	0.20	+0.7
3,394,625	+		CCNA_03229	0.21	+1.9
3,394,633	-		CCNA_03229	0.21	-0.5
3,394,657	-		CCNA_03229	0.23	-1.0
3,394,669	-		CCNA_03229	0.24	-1.8
3,394,777	+		CCNA_03229	0.32	-0.4
3,394,785	-		CCNA_03229	0.33	+1.1
3,394,809	+		CCNA_03229	0.35	-0.1
3,394,883	+		CCNA_03229	0.41	-1.7
3,394,885	-		CCNA_03229	0.41	-0.3
3,394,891	-		CCNA_03229	0.41	-0.1
3,394,901	-		CCNA_03229	0.42	+0.3
3,394,928	-		CCNA_03229	0.44	+0.0
3,394,928	-		CCNA_03229	0.44	+0.3
3,395,012	+		CCNA_03229	0.51	-1.6
3,395,014	-		CCNA_03229	0.51	-0.7
3,395,053	-		CCNA_03229	0.54	+1.3
3,395,053	-		CCNA_03229	0.54	+0.3
3,395,058	-		CCNA_03229	0.54	+1.9
3,395,058	-		CCNA_03229	0.54	-0.2
3,395,058	-		CCNA_03229	0.54	-1.7
3,395,074	-		CCNA_03229	0.55	+0.2
3,395,130	-		CCNA_03229	0.60	-0.6
3,395,143	-		CCNA_03229	0.61	-1.4
3,395,172	+		CCNA_03229	0.63	-0.4
3,395,180	-		CCNA_03229	0.64	-0.5
3,395,181	+		CCNA_03229	0.64	-2.4
3,395,181	+		CCNA_03229	0.64	-0.2
3,395,181	+		CCNA_03229	0.64	+0.0
3,395,189	-		CCNA_03229	0.64	-0.8
3,395,194	+		CCNA_03229	0.65	+0.9
3,395,208	+		CCNA_03229	0.66	-0.1
3,395,232	-		CCNA_03229	0.68	-0.2
3,395,233	-		CCNA_03229	0.68	-2.0
3,395,251	-		CCNA_03229	0.69	+0.8
3,395,260	+		CCNA_03229	0.70	-0.4
3,395,260	+		CCNA_03229	0.70	-1.8
3,395,268	-		CCNA_03229	0.70	-1.3
3,395,268	-		CCNA_03229	0.70	+1.6