Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1260

Experiment: BG11 with Nalidixic 0.0078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Nalidixic 0.0078125 mg/ml
1,282,330	-		Synpcc7942_1259	0.29	-1.8
1,282,330	-		Synpcc7942_1259	0.29	-1.2
1,282,404	+		Synpcc7942_1259	0.35	-0.4
1,282,412	-		Synpcc7942_1259	0.36	+0.2
1,282,431	+		Synpcc7942_1259	0.37	-2.2
1,282,462	-		Synpcc7942_1259	0.40	-1.1
1,282,465	-		Synpcc7942_1259	0.40	+0.1
1,282,485	-		Synpcc7942_1259	0.42	-1.5
1,282,493	-		Synpcc7942_1259	0.42	-2.9
1,282,495	-		Synpcc7942_1259	0.43	-1.6
1,282,562	+		Synpcc7942_1259	0.48	-1.3
1,282,569	-		Synpcc7942_1259	0.49	+0.5
1,282,584	-		Synpcc7942_1259	0.50	-1.7
1,282,601	+		Synpcc7942_1259	0.52	-2.3
1,282,611	+		Synpcc7942_1259	0.52	-1.0
1,282,685	+		Synpcc7942_1259	0.59	-0.0
1,282,700	+		Synpcc7942_1259	0.60	-1.9
1,282,706	+		Synpcc7942_1259	0.60	-1.5
1,282,708	-		Synpcc7942_1259	0.61	-0.9
1,282,724	-		Synpcc7942_1259	0.62	-0.7
1,282,861	-		Synpcc7942_1259	0.74	-1.2
1,282,903	+		Synpcc7942_1259	0.77	-0.4
1,283,061	-				-0.9
1,283,088	-				-2.6
1,283,088	-				-0.6
1,283,099	-				-2.5
1,283,124	-				-2.8
1,283,152	-				-0.7
1,283,212	+				-1.7
1,283,225	-				+0.1
1,283,238	-				-0.4
1,283,248	-				-1.6
1,283,255	-				-1.4
1,283,288	-				+1.1
1,283,299	+				+0.2
1,283,304	+				-0.5
1,283,312	-				-0.0
1,283,312	-				-0.7
1,283,314	+				-0.0
1,283,317	-				-1.4
1,283,317	-				-1.0
1,283,317	-				-0.0
1,283,321	-				-0.2
1,283,342	-		Synpcc7942_1260	0.12	-0.7
1,283,347	+		Synpcc7942_1260	0.12	-0.6
1,283,360	+		Synpcc7942_1260	0.14	+0.2
1,283,389	+		Synpcc7942_1260	0.18	+0.4
1,283,392	-		Synpcc7942_1260	0.18	-0.3
1,283,427	-		Synpcc7942_1260	0.22	-0.9
1,283,504	-		Synpcc7942_1260	0.31	-0.9
1,283,532	-		Synpcc7942_1260	0.35	-1.1
1,283,553	+		Synpcc7942_1260	0.37	+1.2
1,283,588	+		Synpcc7942_1260	0.42	-1.3
1,283,598	+		Synpcc7942_1260	0.43	-0.8
1,283,606	-		Synpcc7942_1260	0.44	-0.1
1,283,608	+		Synpcc7942_1260	0.44	-0.6
1,283,608	+		Synpcc7942_1260	0.44	-0.5
1,283,697	+		Synpcc7942_1260	0.55	-0.7
1,283,714	+		Synpcc7942_1260	0.57	-1.9
1,283,714	+		Synpcc7942_1260	0.57	-1.1
1,283,722	-		Synpcc7942_1260	0.58	-1.0
1,283,748	+		Synpcc7942_1260	0.61	-1.2
1,283,775	-		Synpcc7942_1260	0.64	+0.3
1,283,790	+		Synpcc7942_1260	0.66	-0.4
1,283,790	+		Synpcc7942_1260	0.66	-1.1
1,283,790	+		Synpcc7942_1260	0.66	-0.9
1,283,790	+		Synpcc7942_1260	0.66	+0.1
1,283,798	-		Synpcc7942_1260	0.67	-0.6
1,283,830	-		Synpcc7942_1260	0.71	-1.0
1,283,830	-		Synpcc7942_1260	0.71	-0.6
1,283,836	+		Synpcc7942_1260	0.71	-0.5
1,283,836	+		Synpcc7942_1260	0.71	-0.2
1,283,844	-		Synpcc7942_1260	0.72	-0.3
1,283,865	+		Synpcc7942_1260	0.75	-1.6
1,283,888	-		Synpcc7942_1260	0.78	-1.0
1,283,888	-		Synpcc7942_1260	0.78	+0.0
1,283,925	+		Synpcc7942_1260	0.82	-0.3
1,283,931	+		Synpcc7942_1260	0.83	-0.9
1,283,934	-		Synpcc7942_1260	0.83	-0.3
1,283,944	-		Synpcc7942_1260	0.85	-1.0
1,283,944	-				-0.0
1,283,972	+		Synpcc7942_1260	0.88	-0.2
1,283,972	+		Synpcc7942_1260	0.88	-0.4
1,283,972	+		Synpcc7942_1260	0.88	-0.4
1,283,980	-		Synpcc7942_1260	0.89	-1.5
1,283,980	-		Synpcc7942_1260	0.89	+0.3
1,283,980	-		Synpcc7942_1260	0.89	+0.7
1,283,980	-		Synpcc7942_1260	0.89	-0.4
1,283,980	-		Synpcc7942_1260	0.89	-0.3
1,283,987	+		Synpcc7942_1260	0.90	-0.2
1,284,027	-				+0.3
1,284,082	+				+1.4
1,284,108	-				+0.9
1,284,142	-				-0.2
1,284,142	-				+0.5
1,284,150	+				-0.5
1,284,151	-				+0.8
1,284,173	+				+0.3
1,284,187	+				-1.0
1,284,195	-				-0.5
1,284,211	+				+0.7
1,284,969	+				-0.3
1,284,969	+				+0.3
1,284,969	+				+0.5
1,284,977	+				-0.9
1,284,977	-				-1.0
1,284,987	+				-1.0
1,284,987	+				-1.4
1,284,987	+				-1.4
1,284,995	-				-0.2
1,285,008	+				+0.0
1,285,025	+				+0.5
1,285,025	+				+0.5
1,285,033	-				+0.0
1,285,033	-				-0.2
1,285,033	-				-0.6
1,285,058	+				+0.4