Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1224

Experiment: BG11 with Nalidixic 0.0078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Nalidixic 0.0078125 mg/ml
1,243,998	-		Synpcc7942_1223	0.14	-0.5
1,244,034	-		Synpcc7942_1223	0.17	+1.1
1,244,049	-		Synpcc7942_1223	0.19	-1.0
1,244,074	+		Synpcc7942_1223	0.21	-0.8
1,244,074	+		Synpcc7942_1223	0.21	-0.8
1,244,074	+		Synpcc7942_1223	0.21	-0.9
1,244,074	+		Synpcc7942_1223	0.21	-0.6
1,244,101	-		Synpcc7942_1223	0.23	-1.7
1,244,103	-		Synpcc7942_1223	0.23	+0.3
1,244,115	+		Synpcc7942_1223	0.24	-0.3
1,244,170	-		Synpcc7942_1223	0.29	-1.0
1,244,170	-		Synpcc7942_1223	0.29	-0.8
1,244,187	+		Synpcc7942_1223	0.30	-1.4
1,244,187	+		Synpcc7942_1223	0.30	-0.4
1,244,188	-		Synpcc7942_1223	0.30	+0.3
1,244,217	-		Synpcc7942_1223	0.33	-0.7
1,244,264	+		Synpcc7942_1223	0.37	-2.5
1,244,289	+		Synpcc7942_1223	0.39	-0.6
1,244,297	-		Synpcc7942_1223	0.40	-2.0
1,244,309	+		Synpcc7942_1223	0.41	-1.1
1,244,340	-		Synpcc7942_1223	0.43	-1.7
1,244,340	-		Synpcc7942_1223	0.43	-0.8
1,244,355	-		Synpcc7942_1223	0.45	-0.2
1,244,423	-		Synpcc7942_1223	0.50	-0.8
1,244,440	+		Synpcc7942_1223	0.52	-0.6
1,244,602	+		Synpcc7942_1223	0.65	-1.3
1,244,614	+		Synpcc7942_1223	0.66	-0.9
1,244,627	-		Synpcc7942_1223	0.68	-0.5
1,244,628	-		Synpcc7942_1223	0.68	-1.3
1,244,697	+		Synpcc7942_1223	0.74	-0.9
1,244,708	+		Synpcc7942_1223	0.74	-2.3
1,244,732	+		Synpcc7942_1223	0.77	-0.5
1,244,733	+		Synpcc7942_1223	0.77	-0.1
1,244,738	+		Synpcc7942_1223	0.77	-1.7
1,244,741	-		Synpcc7942_1223	0.77	+0.3
1,244,786	-		Synpcc7942_1223	0.81	-2.2
1,244,802	+		Synpcc7942_1223	0.82	+0.0
1,244,802	+		Synpcc7942_1223	0.82	-0.4
1,244,808	-		Synpcc7942_1223	0.83	-0.8
1,244,810	-		Synpcc7942_1223	0.83	-0.3
1,244,810	-		Synpcc7942_1223	0.83	-2.2
1,244,839	-		Synpcc7942_1223	0.86	+1.1
1,244,839	-		Synpcc7942_1223	0.86	-0.9
1,244,839	-		Synpcc7942_1223	0.86	-0.5
1,244,850	+		Synpcc7942_1223	0.87	-1.0
1,244,858	-		Synpcc7942_1223	0.87	+0.2
1,244,858	-		Synpcc7942_1223	0.87	+3.2
1,244,884	+		Synpcc7942_1223	0.89	-2.0
1,244,892	-				-0.7
1,244,897	+				-1.8
1,244,903	+				+0.4
1,244,921	-				+0.3
1,244,981	+				-1.2
1,244,988	-				-0.6
1,244,989	-				-0.9
1,245,001	+				-1.3
1,245,013	-				+0.3
1,245,066	+				-1.2
1,245,165	-		Synpcc7942_1224	0.16	-1.9
1,245,174	+		Synpcc7942_1224	0.17	-1.2
1,245,201	+		Synpcc7942_1224	0.19	-1.8
1,245,209	-		Synpcc7942_1224	0.20	-2.2
1,245,246	+		Synpcc7942_1224	0.23	-1.0
1,245,285	-		Synpcc7942_1224	0.27	-1.0
1,245,295	-		Synpcc7942_1224	0.28	-1.6
1,245,317	-		Synpcc7942_1224	0.30	-1.2
1,245,345	-		Synpcc7942_1224	0.32	-0.5
1,245,432	-		Synpcc7942_1224	0.40	-1.2
1,245,456	-		Synpcc7942_1224	0.42	-2.0
1,245,457	-		Synpcc7942_1224	0.42	-0.6
1,245,484	+		Synpcc7942_1224	0.45	-0.9
1,245,492	-		Synpcc7942_1224	0.45	-0.9
1,245,493	+		Synpcc7942_1224	0.46	-0.1
1,245,503	+		Synpcc7942_1224	0.46	-0.7
1,245,523	-		Synpcc7942_1224	0.48	-1.5
1,245,523	-		Synpcc7942_1224	0.48	-0.5
1,245,540	-		Synpcc7942_1224	0.50	-1.2
1,245,555	-		Synpcc7942_1224	0.51	-1.6
1,245,555	-		Synpcc7942_1224	0.51	-0.5
1,245,575	+		Synpcc7942_1224	0.53	+0.1
1,245,583	-		Synpcc7942_1224	0.54	-1.2
1,245,585	+		Synpcc7942_1224	0.54	-1.8
1,245,593	-		Synpcc7942_1224	0.55	-0.4
1,245,620	-		Synpcc7942_1224	0.57	-1.4
1,245,627	-		Synpcc7942_1224	0.58	-1.2
1,245,627	-		Synpcc7942_1224	0.58	-1.6
1,245,633	+		Synpcc7942_1224	0.58	-1.1
1,245,707	+		Synpcc7942_1224	0.65	-2.6
1,245,713	-		Synpcc7942_1224	0.65	-1.0
1,245,730	+		Synpcc7942_1224	0.67	-0.1
1,245,769	+		Synpcc7942_1224	0.71	-0.2
1,245,833	-		Synpcc7942_1224	0.76	-1.5
1,245,841	-		Synpcc7942_1224	0.77	-1.9
1,245,872	-		Synpcc7942_1224	0.80	-1.9
1,245,883	+		Synpcc7942_1224	0.81	-0.7
1,245,883	+		Synpcc7942_1224	0.81	-1.8
1,245,899	-		Synpcc7942_1224	0.82	-1.1
1,245,909	-		Synpcc7942_1224	0.83	-1.0
1,245,939	-		Synpcc7942_1224	0.86	-2.4
1,245,945	-		Synpcc7942_1224	0.87	-0.0
1,245,960	-		Synpcc7942_1224	0.88	-2.7
1,246,019	+				-0.3
1,246,076	-				-1.8
1,246,078	-				+0.6
1,246,081	+				-0.7
1,246,091	-				-1.7
1,246,114	+				-0.3
1,246,124	+				-0.5
1,246,178	+				-0.2
1,246,178	+				-0.9
1,246,928	+				+0.3
1,247,018	+				-1.4
1,247,024	+				-0.9
1,247,030	+				-1.1
1,247,030	+				+0.2
1,247,038	-				-0.3
1,247,086	+				-2.0
1,247,091	+				-0.2