Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6093
Experiment: Cesium chloride 0.00078125 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cesium chloride 0.00078125 M |
---|---|---|---|---|---|
remove | |||||
6,915,918 | + | +0.8 | |||
6,915,918 | + | +0.3 | |||
6,915,919 | - | -0.5 | |||
6,916,334 | + | +0.4 | |||
6,916,335 | - | +0.9 | |||
6,916,335 | - | +0.1 | |||
6,916,378 | + | +0.2 | |||
6,916,379 | - | +0.1 | |||
6,916,379 | - | +0.3 | |||
6,916,466 | + | +0.8 | |||
6,916,477 | - | +1.2 | |||
6,916,523 | + | -0.7 | |||
6,916,523 | + | -1.8 | |||
6,916,524 | - | +0.8 | |||
6,916,524 | - | +0.6 | |||
6,916,542 | + | -0.1 | |||
6,916,573 | + | -1.2 | |||
6,916,694 | + | -0.8 | |||
6,916,694 | + | +3.4 | |||
6,916,694 | + | -0.4 | |||
6,916,733 | + | -0.8 | |||
6,916,734 | - | -0.2 | |||
6,916,802 | + | -0.2 | |||
6,916,802 | + | +1.2 | |||
6,916,803 | - | +0.1 | |||
6,916,867 | - | -0.1 | |||
6,916,867 | - | -0.7 | |||
6,916,918 | + | Pf6N2E2_6093 | 0.13 | -0.4 | |
6,916,918 | + | Pf6N2E2_6093 | 0.13 | -0.4 | |
6,916,919 | - | Pf6N2E2_6093 | 0.13 | -0.4 | |
6,916,919 | - | Pf6N2E2_6093 | 0.13 | -0.4 | |
6,917,221 | + | -0.3 | |||
6,917,544 | - | -0.6 | |||
6,917,897 | + | Pf6N2E2_6094 | 0.31 | +0.2 | |
6,917,898 | - | Pf6N2E2_6094 | 0.31 | +0.1 | |
6,917,898 | - | Pf6N2E2_6094 | 0.31 | +1.0 | |
6,917,898 | - | Pf6N2E2_6094 | 0.31 | +0.3 | |
6,918,042 | + | Pf6N2E2_6094 | 0.40 | +0.6 | |
6,918,132 | - | Pf6N2E2_6094 | 0.45 | +0.1 | |
6,918,146 | + | Pf6N2E2_6094 | 0.46 | +1.2 |
Or see this region's nucleotide sequence