Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2477
Experiment: Cesium chloride 0.00078125 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cesium chloride 0.00078125 M |
---|---|---|---|---|---|
remove | |||||
2,921,996 | - | -0.1 | |||
2,921,996 | - | -0.4 | |||
2,921,996 | - | -0.3 | |||
2,922,372 | - | +0.7 | |||
2,922,372 | - | -0.7 | |||
2,922,372 | - | +0.1 | |||
2,922,507 | + | Pf6N2E2_2476 | 0.27 | +0.3 | |
2,922,508 | - | Pf6N2E2_2476 | 0.27 | +0.1 | |
2,922,532 | - | Pf6N2E2_2476 | 0.31 | +0.9 | |
2,922,543 | + | Pf6N2E2_2476 | 0.33 | -1.6 | |
2,922,775 | + | Pf6N2E2_2476 | 0.71 | +1.0 | |
2,922,859 | + | Pf6N2E2_2476 | 0.85 | +0.2 | |
2,922,860 | - | Pf6N2E2_2476 | 0.85 | +0.2 | |
2,922,884 | - | Pf6N2E2_2476 | 0.89 | -0.3 | |
2,922,992 | + | +0.4 | |||
2,923,181 | + | Pf6N2E2_2477 | 0.32 | -2.5 | |
2,923,181 | + | Pf6N2E2_2477 | 0.32 | -0.2 | |
2,923,597 | + | -0.2 | |||
2,923,762 | + | -0.0 | |||
2,923,776 | - | -1.1 | |||
2,924,171 | + | Pf6N2E2_2478 | 0.21 | +0.1 | |
2,924,172 | - | Pf6N2E2_2478 | 0.21 | -0.0 | |
2,924,172 | - | Pf6N2E2_2478 | 0.21 | +0.1 | |
2,924,172 | - | Pf6N2E2_2478 | 0.21 | +0.9 | |
2,924,172 | - | Pf6N2E2_2478 | 0.21 | -0.3 | |
2,924,172 | - | Pf6N2E2_2478 | 0.21 | +0.2 | |
2,924,198 | + | Pf6N2E2_2478 | 0.22 | -0.1 | |
2,924,279 | + | Pf6N2E2_2478 | 0.25 | -0.5 | |
2,924,423 | + | Pf6N2E2_2478 | 0.31 | -0.7 | |
2,924,606 | - | Pf6N2E2_2478 | 0.38 | -0.6 |
Or see this region's nucleotide sequence