Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1715
Experiment: Cesium chloride 0.00078125 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cesium chloride 0.00078125 M |
---|---|---|---|---|---|
remove | |||||
2,022,134 | + | Pf6N2E2_1713 | 0.62 | +0.5 | |
2,022,407 | + | -0.3 | |||
2,022,520 | - | Pf6N2E2_1714 | 0.22 | +0.4 | |
2,022,638 | + | Pf6N2E2_1714 | 0.39 | -0.0 | |
2,022,662 | + | Pf6N2E2_1714 | 0.43 | +0.1 | |
2,022,912 | - | Pf6N2E2_1714 | 0.79 | +0.4 | |
2,022,912 | - | Pf6N2E2_1714 | 0.79 | -0.8 | |
2,022,917 | + | Pf6N2E2_1714 | 0.80 | -0.4 | |
2,022,942 | - | Pf6N2E2_1714 | 0.84 | +0.3 | |
2,023,102 | - | -0.3 | |||
2,023,182 | + | Pf6N2E2_1715 | 0.23 | -1.9 | |
2,023,183 | - | Pf6N2E2_1715 | 0.23 | -0.8 | |
2,023,446 | + | Pf6N2E2_1715 | 0.72 | -0.6 | |
2,023,447 | - | Pf6N2E2_1715 | 0.72 | -1.8 | |
2,023,527 | + | Pf6N2E2_1715 | 0.86 | +0.4 | |
2,024,129 | + | Pf6N2E2_1716 | 0.38 | +0.2 | |
2,024,129 | + | Pf6N2E2_1716 | 0.38 | +0.0 | |
2,024,130 | - | Pf6N2E2_1716 | 0.39 | +1.1 | |
2,024,130 | - | Pf6N2E2_1716 | 0.39 | +0.2 | |
2,024,130 | - | Pf6N2E2_1716 | 0.39 | -1.0 | |
2,024,130 | - | Pf6N2E2_1716 | 0.39 | +0.2 | |
2,024,130 | - | Pf6N2E2_1716 | 0.39 | +0.1 | |
2,024,130 | - | Pf6N2E2_1716 | 0.39 | -1.0 | |
2,024,237 | + | Pf6N2E2_1716 | 0.46 | -0.8 | |
2,024,517 | + | Pf6N2E2_1716 | 0.67 | -1.0 |
Or see this region's nucleotide sequence