Strain Fitness in Pantoea sp. MT58 around IAI47_21855

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
120,185	-				+0.6
120,220	+				-0.9
120,220	+				-0.2
120,220	+				+1.2
120,221	-				-1.1
120,221	-				+1.1
120,221	-				+1.1
120,221	-				+0.2
120,221	-				-2.5
120,260	+		IAI47_21850	0.12	-0.4
120,260	+		IAI47_21850	0.12	-0.8
120,265	+		IAI47_21850	0.12	-1.3
120,266	-		IAI47_21850	0.13	-1.4
120,291	+		IAI47_21850	0.15	+0.4
120,291	+		IAI47_21850	0.15	+0.2
120,291	+		IAI47_21850	0.15	-1.9
120,292	-		IAI47_21850	0.15	+0.8
120,297	+		IAI47_21850	0.16	+0.6
120,297	+		IAI47_21850	0.16	-0.1
120,297	+		IAI47_21850	0.16	-0.7
120,298	-		IAI47_21850	0.16	-2.0
120,298	-		IAI47_21850	0.16	-1.4
120,298	-		IAI47_21850	0.16	-0.9
120,298	-		IAI47_21850	0.16	-1.1
120,298	-		IAI47_21850	0.16	-1.8
120,298	-		IAI47_21850	0.16	-0.8
120,343	+		IAI47_21850	0.20	+1.0
120,343	+		IAI47_21850	0.20	-1.9
120,343	+		IAI47_21850	0.20	-1.4
120,343	+		IAI47_21850	0.20	-0.6
120,343	+		IAI47_21850	0.20	-1.0
120,343	+		IAI47_21850	0.20	-0.5
120,343	+		IAI47_21850	0.20	-0.3
120,343	+		IAI47_21850	0.20	-0.8
120,344	-		IAI47_21850	0.20	+1.8
120,344	-		IAI47_21850	0.20	-0.0
120,344	-		IAI47_21850	0.20	-2.2
120,358	-		IAI47_21850	0.22	+1.0
120,358	-		IAI47_21850	0.22	-0.1
120,427	+		IAI47_21850	0.29	+0.6
120,451	-		IAI47_21850	0.31	-1.7
120,468	+		IAI47_21850	0.33	-0.8
120,468	+		IAI47_21850	0.33	+1.7
120,468	+		IAI47_21850	0.33	-1.3
120,468	+		IAI47_21850	0.33	-1.8
120,468	+		IAI47_21850	0.33	-1.1
120,468	+		IAI47_21850	0.33	-1.1
120,469	-		IAI47_21850	0.33	-0.5
120,469	-		IAI47_21850	0.33	+0.6
120,469	-		IAI47_21850	0.33	+2.0
120,469	-		IAI47_21850	0.33	+2.6
120,469	-		IAI47_21850	0.33	-1.3
120,469	-		IAI47_21850	0.33	-1.7
120,473	-		IAI47_21850	0.33	+1.3
120,473	-		IAI47_21850	0.33	+1.0
120,473	-		IAI47_21850	0.33	+0.2
120,481	+		IAI47_21850	0.34	+1.3
120,482	-		IAI47_21850	0.34	-0.9
120,581	-		IAI47_21850	0.44	-0.2
120,581	-		IAI47_21850	0.44	+1.2
120,581	-		IAI47_21850	0.44	-0.2
120,581	-		IAI47_21850	0.44	-0.9
120,585	+		IAI47_21850	0.44	-0.3
120,585	+		IAI47_21850	0.44	-0.5
120,585	+		IAI47_21850	0.44	-1.0
120,585	+		IAI47_21850	0.44	-2.1
120,585	+		IAI47_21850	0.44	-1.8
120,585	+		IAI47_21850	0.44	-0.1
120,586	-		IAI47_21850	0.44	+0.1
120,586	-		IAI47_21850	0.44	-1.2
120,586	-		IAI47_21850	0.44	+2.6
120,586	-		IAI47_21850	0.44	+1.0
120,634	+		IAI47_21850	0.49	-0.0
120,634	+		IAI47_21850	0.49	+2.0
120,634	+		IAI47_21850	0.49	-0.0
120,641	+		IAI47_21850	0.50	-1.0
120,670	+		IAI47_21850	0.53	-1.2
120,670	+		IAI47_21850	0.53	-0.1
120,670	+		IAI47_21850	0.53	-0.9
120,670	+		IAI47_21850	0.53	+0.1
120,670	+		IAI47_21850	0.53	-0.9
120,670	+		IAI47_21850	0.53	+0.2
120,670	+		IAI47_21850	0.53	-0.9
120,670	+		IAI47_21850	0.53	+0.8
120,671	-		IAI47_21850	0.53	+0.8
120,671	-		IAI47_21850	0.53	+1.3
120,671	-		IAI47_21850	0.53	+0.7
120,671	-		IAI47_21850	0.53	+3.2
120,671	-		IAI47_21850	0.53	+0.2
120,671	-		IAI47_21850	0.53	+0.1
120,671	-		IAI47_21850	0.53	-0.4
120,671	-		IAI47_21850	0.53	-0.2
120,673	+		IAI47_21850	0.53	-2.1
120,673	+		IAI47_21850	0.53	-2.2
120,673	+		IAI47_21850	0.53	-0.4
120,673	+		IAI47_21850	0.53	+0.7
120,673	+		IAI47_21850	0.53	-0.6
120,673	+		IAI47_21850	0.53	-1.4
120,674	-		IAI47_21850	0.53	+1.9
120,674	-		IAI47_21850	0.53	-0.6
120,674	-		IAI47_21850	0.53	-0.0
120,674	-		IAI47_21850	0.53	-0.9
120,729	+		IAI47_21850	0.59	+0.2
120,729	+		IAI47_21850	0.59	-0.8
120,729	+		IAI47_21850	0.59	+0.7
120,729	+		IAI47_21850	0.59	+1.0
120,729	+		IAI47_21850	0.59	-0.0
120,729	+		IAI47_21850	0.59	-0.0
120,729	+		IAI47_21850	0.59	-1.1
120,729	+		IAI47_21850	0.59	-0.6
120,729	+		IAI47_21850	0.59	-0.7
120,730	-		IAI47_21850	0.59	+0.3
120,730	-		IAI47_21850	0.59	-0.2
120,730	-		IAI47_21850	0.59	-1.5
120,730	-		IAI47_21850	0.59	-1.7
120,730	-		IAI47_21850	0.59	-0.6
120,730	-		IAI47_21850	0.59	-0.2
120,730	-		IAI47_21850	0.59	+0.0
120,730	-		IAI47_21850	0.59	+0.1
120,748	+		IAI47_21850	0.60	-2.0
120,749	-		IAI47_21850	0.61	-1.5
120,749	-		IAI47_21850	0.61	-0.2
120,749	-		IAI47_21850	0.61	+0.6
120,749	-		IAI47_21850	0.61	-0.2
120,910	+		IAI47_21850	0.77	-0.2
120,940	+		IAI47_21850	0.80	-2.1
120,940	+		IAI47_21850	0.80	-1.2
120,940	+		IAI47_21850	0.80	-2.2
120,940	+		IAI47_21850	0.80	+0.8
120,941	-		IAI47_21850	0.80	+0.1
120,941	-		IAI47_21850	0.80	+0.1
120,941	-		IAI47_21850	0.80	-1.7
120,987	+		IAI47_21850	0.84	-2.1
120,987	+		IAI47_21850	0.84	-1.5
120,987	+		IAI47_21850	0.84	-2.0
120,988	-		IAI47_21850	0.84	+1.8
121,009	+		IAI47_21850	0.86	-0.9
121,009	+		IAI47_21850	0.86	-0.5
121,009	+		IAI47_21850	0.86	-0.2
121,009	+		IAI47_21850	0.86	-1.0
121,010	-		IAI47_21850	0.87	-2.1
121,010	-		IAI47_21850	0.87	-0.8
121,010	-		IAI47_21850	0.87	-1.1
121,010	-		IAI47_21850	0.87	+0.6
121,044	-				-0.0
121,120	+				-1.6
121,120	+				-0.0
121,120	+				+1.8
121,120	+				-0.9
121,120	+				-1.8
121,121	-				-0.8
121,121	-				+3.4
121,121	-				+2.6
121,124	-				-1.1
121,124	-				+0.1
121,124	-				-0.9
121,124	-				+0.4
121,124	-				+1.6
121,171	+				-0.9
121,171	+				-0.6
121,172	-				-1.0
121,172	-				+2.6
121,175	+				-1.6
121,175	+				-1.6
121,175	+				-1.2
121,175	+				-0.8
121,175	+				+1.6
121,176	-				+0.8
121,176	-				+1.4
121,176	-				+1.2
121,176	-				+0.2
121,176	-				+0.4
121,176	-				+0.3
121,180	+				-2.1
121,181	-				+0.3
121,181	-				+1.3
121,181	-				+0.5
121,266	-				-1.5
121,266	-				-0.1
121,272	+				-0.9
121,272	+				-0.2
121,272	+				+1.1
121,273	-				+0.8
121,344	+		IAI47_21855	0.12	-0.7
121,367	+		IAI47_21855	0.14	-1.1
121,367	+		IAI47_21855	0.14	-0.1
121,367	+		IAI47_21855	0.14	+0.6
121,367	+		IAI47_21855	0.14	-1.8
121,368	-		IAI47_21855	0.14	-0.1
121,368	-		IAI47_21855	0.14	+1.6
121,368	-		IAI47_21855	0.14	-0.0
121,368	-		IAI47_21855	0.14	+1.4
121,368	-		IAI47_21855	0.14	+0.7
121,440	+		IAI47_21855	0.19	-1.9
121,506	+		IAI47_21855	0.24	-0.0
121,506	+		IAI47_21855	0.24	+0.3
121,506	+		IAI47_21855	0.24	-0.2
121,507	-		IAI47_21855	0.24	+0.8
121,507	-		IAI47_21855	0.24	+0.5
121,507	-		IAI47_21855	0.24	+2.1
121,507	-		IAI47_21855	0.24	+3.4
121,533	+		IAI47_21855	0.25	-1.2
121,533	+		IAI47_21855	0.25	+1.2
121,533	+		IAI47_21855	0.25	-1.2
121,534	-		IAI47_21855	0.26	+0.4
121,534	-		IAI47_21855	0.26	+1.1
121,534	-		IAI47_21855	0.26	-1.2
121,534	-		IAI47_21855	0.26	-1.6
121,534	-		IAI47_21855	0.26	+0.2
121,534	-		IAI47_21855	0.26	+0.7
121,535	+		IAI47_21855	0.26	+0.2
121,535	+		IAI47_21855	0.26	-0.7
121,535	+		IAI47_21855	0.26	-0.3
121,535	+		IAI47_21855	0.26	+0.5
121,535	+		IAI47_21855	0.26	-1.1
121,536	-		IAI47_21855	0.26	+2.1
121,536	-		IAI47_21855	0.26	+1.1
121,536	-		IAI47_21855	0.26	+0.4
121,536	-		IAI47_21855	0.26	+0.7
121,536	-		IAI47_21855	0.26	+0.9
121,536	-		IAI47_21855	0.26	-1.1
121,536	-		IAI47_21855	0.26	+0.1
121,536	-		IAI47_21855	0.26	-1.8
121,536	-		IAI47_21855	0.26	-0.6
121,731	+		IAI47_21855	0.40	-2.1
121,731	+		IAI47_21855	0.40	+0.2
121,731	+		IAI47_21855	0.40	-1.7
121,731	+		IAI47_21855	0.40	+3.7
121,732	-		IAI47_21855	0.40	+0.4
121,732	-		IAI47_21855	0.40	+0.6
121,732	-		IAI47_21855	0.40	+0.2
121,732	-		IAI47_21855	0.40	+0.5
121,732	-		IAI47_21855	0.40	+1.1
121,732	-		IAI47_21855	0.40	-0.4
121,745	+		IAI47_21855	0.40	-0.8
121,745	+		IAI47_21855	0.40	-0.6
121,790	+		IAI47_21855	0.44	-0.6
121,790	+		IAI47_21855	0.44	-0.4
121,791	-		IAI47_21855	0.44	-0.2
121,791	-		IAI47_21855	0.44	+1.3
121,791	-		IAI47_21855	0.44	+0.2
121,791	-		IAI47_21855	0.44	+3.8
121,792	+		IAI47_21855	0.44	-2.9
121,792	+		IAI47_21855	0.44	-2.8
121,792	+		IAI47_21855	0.44	+0.4
121,792	+		IAI47_21855	0.44	-0.2
121,792	+		IAI47_21855	0.44	-1.5
121,793	-		IAI47_21855	0.44	-0.9
121,793	-		IAI47_21855	0.44	+3.4
121,793	-		IAI47_21855	0.44	+1.8
121,793	-		IAI47_21855	0.44	-1.3
121,793	-		IAI47_21855	0.44	+3.6
121,793	-		IAI47_21855	0.44	-1.0
121,793	-		IAI47_21855	0.44	+2.0
121,793	-		IAI47_21855	0.44	+0.5
121,805	+		IAI47_21855	0.45	+0.8
121,806	-		IAI47_21855	0.45	-0.3
121,850	+		IAI47_21855	0.48	-0.8
121,850	+		IAI47_21855	0.48	-2.0
121,851	-		IAI47_21855	0.48	-0.0
121,851	-		IAI47_21855	0.48	+1.3
121,868	-		IAI47_21855	0.49	+0.4
121,870	+		IAI47_21855	0.49	+3.1
121,870	+		IAI47_21855	0.49	-0.3
121,871	-		IAI47_21855	0.49	-0.8
121,871	-		IAI47_21855	0.49	-0.4
121,871	-		IAI47_21855	0.49	+0.5
121,895	+		IAI47_21855	0.51	+0.7
121,895	+		IAI47_21855	0.51	-0.1
121,895	+		IAI47_21855	0.51	-1.0
121,896	-		IAI47_21855	0.51	+2.3
121,896	-		IAI47_21855	0.51	-1.8
121,896	-		IAI47_21855	0.51	-0.1
121,920	+		IAI47_21855	0.53	+0.2
121,920	+		IAI47_21855	0.53	-0.9
121,921	-		IAI47_21855	0.53	+0.8
121,921	-		IAI47_21855	0.53	+0.4
121,938	+		IAI47_21855	0.54	-1.2
121,938	+		IAI47_21855	0.54	+0.8
121,938	+		IAI47_21855	0.54	-1.6
121,938	+		IAI47_21855	0.54	+0.9
121,938	+		IAI47_21855	0.54	+1.0
121,938	+		IAI47_21855	0.54	-1.2
121,938	+		IAI47_21855	0.54	-2.8
121,939	-		IAI47_21855	0.54	+0.5
121,939	-		IAI47_21855	0.54	+1.0
121,939	-		IAI47_21855	0.54	+0.4
121,939	-		IAI47_21855	0.54	-0.0
121,939	-		IAI47_21855	0.54	+0.1
121,940	+		IAI47_21855	0.54	-0.4
121,940	+		IAI47_21855	0.54	+0.5
121,940	+		IAI47_21855	0.54	+0.8
121,940	+		IAI47_21855	0.54	-0.9
121,940	+		IAI47_21855	0.54	-0.3
121,940	+		IAI47_21855	0.54	-0.5
121,940	+		IAI47_21855	0.54	+1.0
121,940	+		IAI47_21855	0.54	-0.5
121,940	+		IAI47_21855	0.54	-1.7
121,940	+		IAI47_21855	0.54	-0.8
121,940	+		IAI47_21855	0.54	-1.1
121,940	+		IAI47_21855	0.54	-1.1
121,941	-		IAI47_21855	0.54	+0.1
121,941	-		IAI47_21855	0.54	-0.2
121,941	-		IAI47_21855	0.54	+3.1
121,941	-		IAI47_21855	0.54	-1.1
121,941	-		IAI47_21855	0.54	+0.1
122,029	+		IAI47_21855	0.61	+0.8
122,041	+		IAI47_21855	0.61	+0.2
122,042	-		IAI47_21855	0.62	+0.0
122,042	-		IAI47_21855	0.62	+1.5
122,042	-		IAI47_21855	0.62	+0.1
122,072	+		IAI47_21855	0.64	+0.5
122,072	+		IAI47_21855	0.64	+1.0
122,072	+		IAI47_21855	0.64	+0.4
122,073	-		IAI47_21855	0.64	-1.9
122,073	-		IAI47_21855	0.64	-0.3
122,073	-		IAI47_21855	0.64	+1.6
122,078	+		IAI47_21855	0.64	+0.1
122,079	-		IAI47_21855	0.64	+0.1
122,121	+		IAI47_21855	0.67	+1.0
122,122	-		IAI47_21855	0.67	+2.0
122,123	+		IAI47_21855	0.67	-0.5
122,124	-		IAI47_21855	0.67	+1.1
122,142	+		IAI47_21855	0.69	-0.6
122,142	+		IAI47_21855	0.69	-1.0
122,239	-		IAI47_21855	0.76	+0.0
122,239	-		IAI47_21855	0.76	-0.2
122,240	+		IAI47_21855	0.76	+0.5
122,241	-		IAI47_21855	0.76	+1.6
122,241	-		IAI47_21855	0.76	-1.2
122,241	-		IAI47_21855	0.76	+0.5
122,241	-		IAI47_21855	0.76	+1.1
122,241	-		IAI47_21855	0.76	+0.1
122,241	-		IAI47_21855	0.76	+0.6
122,285	+		IAI47_21855	0.79	+0.2
122,286	-		IAI47_21855	0.79	+0.7
122,303	+		IAI47_21855	0.80	+0.5
122,303	+		IAI47_21855	0.80	-0.3
122,303	+		IAI47_21855	0.80	+0.9
122,304	-		IAI47_21855	0.80	+2.8
122,417	+		IAI47_21855	0.88	-1.0
122,418	-		IAI47_21855	0.88	-1.0
122,429	+		IAI47_21855	0.89	-1.4
122,429	+		IAI47_21855	0.89	+0.4
122,429	+		IAI47_21855	0.89	+0.2
122,429	+		IAI47_21855	0.89	+0.7
122,429	+		IAI47_21855	0.89	+0.8
122,429	+		IAI47_21855	0.89	+0.8
122,429	+		IAI47_21855	0.89	-0.3
122,429	+		IAI47_21855	0.89	-1.6
122,430	-		IAI47_21855	0.89	+1.0
122,430	-		IAI47_21855	0.89	-0.1
122,449	-				-0.2
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