Strain Fitness in Pantoea sp. MT58 around IAI47_14245

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,011,273	+		IAI47_14235	0.75	-0.7
3,011,273	+		IAI47_14235	0.75	-2.4
3,011,273	+		IAI47_14235	0.75	+0.7
3,011,273	+		IAI47_14235	0.75	-0.6
3,011,273	+		IAI47_14235	0.75	+0.4
3,011,299	-		IAI47_14235	0.77	-0.2
3,011,310	+		IAI47_14235	0.78	-1.6
3,011,311	-		IAI47_14235	0.78	-1.2
3,011,311	-		IAI47_14235	0.78	-0.9
3,011,311	-		IAI47_14235	0.78	+0.4
3,011,317	-		IAI47_14235	0.79	+0.5
3,011,367	-		IAI47_14235	0.82	-1.2
3,011,384	-		IAI47_14235	0.83	+1.6
3,011,392	+		IAI47_14235	0.84	+0.0
3,011,392	+		IAI47_14235	0.84	-1.3
3,011,392	+		IAI47_14235	0.84	-0.2
3,011,393	-		IAI47_14235	0.84	-0.5
3,011,393	-		IAI47_14235	0.84	-0.4
3,011,417	+		IAI47_14235	0.86	-0.5
3,011,417	+		IAI47_14235	0.86	-0.8
3,011,417	+		IAI47_14235	0.86	-1.3
3,011,417	+		IAI47_14235	0.86	-1.2
3,011,417	+		IAI47_14235	0.86	+0.4
3,011,418	-		IAI47_14235	0.86	-0.2
3,011,418	-		IAI47_14235	0.86	-0.6
3,011,418	-		IAI47_14235	0.86	+0.3
3,011,418	-		IAI47_14235	0.86	-0.5
3,011,418	-		IAI47_14235	0.86	+0.9
3,011,418	-		IAI47_14235	0.86	+1.2
3,011,418	-		IAI47_14235	0.86	-1.2
3,011,418	-		IAI47_14235	0.86	+0.3
3,011,418	-		IAI47_14235	0.86	-0.6
3,011,418	-		IAI47_14235	0.86	-0.2
3,011,418	-		IAI47_14235	0.86	-1.7
3,011,423	+		IAI47_14235	0.86	-1.3
3,011,423	+		IAI47_14235	0.86	+0.1
3,011,423	+		IAI47_14235	0.86	-2.0
3,011,424	-		IAI47_14235	0.86	+0.3
3,011,424	-		IAI47_14235	0.86	-2.2
3,011,424	-		IAI47_14235	0.86	+0.3
3,011,440	+		IAI47_14235	0.87	-0.1
3,011,441	-		IAI47_14235	0.87	-0.8
3,011,485	+				+0.5
3,011,485	+				+0.4
3,011,486	-				-0.3
3,011,489	+				+0.5
3,011,489	+				+0.4
3,011,490	-				-1.1
3,011,490	-				+0.6
3,011,490	-				-0.9
3,011,490	-				-0.6
3,011,491	+				-0.5
3,011,491	+				+0.3
3,011,491	+				-1.7
3,011,491	+				+0.0
3,011,491	+				+0.3
3,011,491	+				-0.2
3,011,491	+				+0.7
3,011,491	+				-2.6
3,011,492	-				+0.1
3,011,492	-				+0.6
3,011,492	-				-0.4
3,011,492	-				-0.1
3,011,492	-				+0.0
3,011,492	-				+0.6
3,011,492	-				-0.6
3,011,492	-				+0.0
3,011,533	+				-0.1
3,011,533	+				-0.2
3,011,533	+				+0.2
3,011,533	+				+1.3
3,011,533	+				+0.5
3,011,533	+				+0.3
3,011,533	+				+1.3
3,011,533	+				-1.6
3,011,533	+				+0.0
3,011,534	-				+1.3
3,011,534	-				+0.8
3,011,534	-				-0.5
3,011,534	-				-3.3
3,011,534	-				-0.2
3,011,534	-				+0.4
3,011,534	-				-0.5
3,011,553	+				-1.6
3,011,553	+				-0.4
3,011,554	-				+0.1
3,011,572	+				-0.6
3,011,572	+				-1.3
3,011,573	-				-1.4
3,011,573	-				-1.6
3,011,573	-				-0.1
3,011,590	+				+0.0
3,011,590	+				-1.0
3,011,590	+				+2.5
3,011,590	+				+0.5
3,011,591	-				-1.1
3,011,591	-				-1.4
3,011,620	+				+0.3
3,011,620	+				-0.4
3,011,621	-				+0.6
3,011,633	-				+0.8
3,011,706	-		IAI47_14240	0.14	+0.9
3,011,706	-		IAI47_14240	0.14	-1.5
3,011,706	-		IAI47_14240	0.14	+0.2
3,011,713	+		IAI47_14240	0.15	+1.4
3,011,713	+		IAI47_14240	0.15	+0.3
3,011,713	+		IAI47_14240	0.15	-0.2
3,011,714	-		IAI47_14240	0.16	-0.6
3,011,747	+		IAI47_14240	0.21	-0.4
3,011,747	+		IAI47_14240	0.21	-1.6
3,011,747	+		IAI47_14240	0.21	+1.3
3,011,747	+		IAI47_14240	0.21	-0.2
3,011,747	+		IAI47_14240	0.21	-0.6
3,011,747	+		IAI47_14240	0.21	-1.4
3,011,748	-		IAI47_14240	0.21	-1.5
3,011,748	-		IAI47_14240	0.21	+1.1
3,011,748	-		IAI47_14240	0.21	-2.1
3,011,796	+		IAI47_14240	0.28	+1.1
3,011,797	-		IAI47_14240	0.28	-1.6
3,011,797	-		IAI47_14240	0.28	+0.8
3,011,805	-		IAI47_14240	0.29	+2.6
3,011,812	+		IAI47_14240	0.30	+0.1
3,011,812	+		IAI47_14240	0.30	+1.1
3,011,812	+		IAI47_14240	0.30	+0.5
3,011,812	+		IAI47_14240	0.30	+0.3
3,011,813	-		IAI47_14240	0.31	-0.4
3,011,813	-		IAI47_14240	0.31	-0.2
3,011,814	-		IAI47_14240	0.31	+2.0
3,011,837	-		IAI47_14240	0.34	+2.0
3,011,850	+		IAI47_14240	0.36	+1.4
3,011,851	-		IAI47_14240	0.36	-1.1
3,011,853	+		IAI47_14240	0.37	-0.4
3,011,853	+		IAI47_14240	0.37	-0.9
3,011,853	+		IAI47_14240	0.37	-0.3
3,011,854	-		IAI47_14240	0.37	-0.0
3,011,854	-		IAI47_14240	0.37	-0.4
3,011,854	-		IAI47_14240	0.37	+1.7
3,011,854	-		IAI47_14240	0.37	+1.0
3,011,854	-		IAI47_14240	0.37	-0.4
3,011,874	+		IAI47_14240	0.40	+0.5
3,011,874	+		IAI47_14240	0.40	+1.4
3,011,874	+		IAI47_14240	0.40	+0.7
3,011,875	-		IAI47_14240	0.40	+1.2
3,011,875	-		IAI47_14240	0.40	-1.1
3,011,875	-		IAI47_14240	0.40	-1.3
3,011,875	-		IAI47_14240	0.40	-0.9
3,011,875	-		IAI47_14240	0.40	+1.3
3,011,934	+		IAI47_14240	0.49	+0.2
3,011,934	+		IAI47_14240	0.49	-0.3
3,011,935	-		IAI47_14240	0.49	+0.2
3,011,935	-		IAI47_14240	0.49	+0.3
3,011,935	-		IAI47_14240	0.49	+0.2
3,011,935	-		IAI47_14240	0.49	-1.1
3,011,935	-		IAI47_14240	0.49	+0.1
3,011,948	+		IAI47_14240	0.51	-0.4
3,011,948	+		IAI47_14240	0.51	-0.6
3,011,949	-		IAI47_14240	0.51	-0.7
3,011,949	-		IAI47_14240	0.51	-0.2
3,012,008	+		IAI47_14240	0.60	+0.4
3,012,009	-		IAI47_14240	0.60	-1.0
3,012,029	+		IAI47_14240	0.63	-0.5
3,012,029	+		IAI47_14240	0.63	+0.2
3,012,029	+		IAI47_14240	0.63	-0.9
3,012,029	+		IAI47_14240	0.63	-1.6
3,012,029	+		IAI47_14240	0.63	-2.6
3,012,029	+		IAI47_14240	0.63	-0.4
3,012,030	-		IAI47_14240	0.64	+0.5
3,012,030	-		IAI47_14240	0.64	-1.6
3,012,030	-		IAI47_14240	0.64	+0.0
3,012,030	-		IAI47_14240	0.64	+0.1
3,012,030	-		IAI47_14240	0.64	-0.7
3,012,030	-		IAI47_14240	0.64	-2.8
3,012,030	-		IAI47_14240	0.64	-0.5
3,012,030	-		IAI47_14240	0.64	-0.4
3,012,074	-		IAI47_14240	0.70	-0.2
3,012,125	+		IAI47_14240	0.78	+2.1
3,012,125	+		IAI47_14240	0.78	-2.1
3,012,126	-		IAI47_14240	0.78	-0.2
3,012,126	-		IAI47_14240	0.78	-1.1
3,012,136	+		IAI47_14240	0.80	+1.0
3,012,137	-		IAI47_14240	0.80	-0.3
3,012,137	-		IAI47_14240	0.80	-1.3
3,012,227	+				-3.4
3,012,228	-				-0.3
3,012,261	-				+0.2
3,012,261	-				-0.6
3,012,262	+				+0.3
3,012,294	+				+1.2
3,012,294	+				-0.9
3,012,294	+				+1.2
3,012,294	+				+0.3
3,012,294	+				-1.7
3,012,295	-				-0.1
3,012,295	-				-0.5
3,012,297	+				-0.6
3,012,297	+				+0.2
3,012,297	+				+0.9
3,012,298	-				+1.5
3,012,298	-				+0.7
3,012,298	-				-0.7
3,012,300	+				+1.0
3,012,318	+				+0.7
3,012,318	+				-0.8
3,012,319	-				+1.4
3,012,319	-				-0.5
3,012,319	-				-0.4
3,012,512	-		IAI47_14245	0.23	-0.2
3,012,546	+		IAI47_14245	0.27	+2.2
3,012,547	-		IAI47_14245	0.27	-0.7
3,012,618	+		IAI47_14245	0.33	-0.1
3,012,619	-		IAI47_14245	0.34	+0.8
3,012,619	-		IAI47_14245	0.34	+0.6
3,012,619	-		IAI47_14245	0.34	+1.4
3,012,619	-		IAI47_14245	0.34	-1.0
3,012,619	-		IAI47_14245	0.34	+1.4
3,012,677	+		IAI47_14245	0.39	-0.0
3,012,677	+		IAI47_14245	0.39	-0.9
3,012,677	+		IAI47_14245	0.39	+0.8
3,012,677	+		IAI47_14245	0.39	-1.0
3,012,678	-		IAI47_14245	0.39	-0.2
3,012,678	-		IAI47_14245	0.39	+1.3
3,012,678	-		IAI47_14245	0.39	+0.8
3,012,703	+		IAI47_14245	0.41	-0.1
3,012,703	+		IAI47_14245	0.41	+2.2
3,012,703	+		IAI47_14245	0.41	+0.7
3,012,703	+		IAI47_14245	0.41	-0.1
3,012,704	-		IAI47_14245	0.42	+1.3
3,012,715	+		IAI47_14245	0.43	+1.2
3,012,715	+		IAI47_14245	0.43	-1.7
3,012,715	+		IAI47_14245	0.43	+0.1
3,012,739	+		IAI47_14245	0.45	+0.1
3,012,740	-		IAI47_14245	0.45	-1.7
3,012,839	+		IAI47_14245	0.54	-1.3
3,012,839	+		IAI47_14245	0.54	+1.1
3,012,839	+		IAI47_14245	0.54	+0.2
3,012,839	+		IAI47_14245	0.54	-0.5
3,012,839	+		IAI47_14245	0.54	-0.6
3,012,839	+		IAI47_14245	0.54	+1.0
3,012,840	-		IAI47_14245	0.54	+0.4
3,012,840	-		IAI47_14245	0.54	-0.4
3,012,840	-		IAI47_14245	0.54	+1.1
3,012,840	-		IAI47_14245	0.54	-1.3
3,012,848	-		IAI47_14245	0.55	-1.4
3,012,861	-		IAI47_14245	0.56	-0.2
3,012,861	-		IAI47_14245	0.56	+0.3
3,012,951	+		IAI47_14245	0.65	+1.2
3,012,951	+		IAI47_14245	0.65	+0.5
3,012,952	-		IAI47_14245	0.65	+0.9
3,012,952	-		IAI47_14245	0.65	+1.4
3,012,952	-		IAI47_14245	0.65	-0.3
3,013,044	+		IAI47_14245	0.74	-0.2
3,013,059	-		IAI47_14245	0.75	+0.6
3,013,059	-		IAI47_14245	0.75	+1.9
3,013,107	+		IAI47_14245	0.80	-2.9
3,013,107	+		IAI47_14245	0.80	+1.9
3,013,107	+		IAI47_14245	0.80	+0.5
3,013,108	-		IAI47_14245	0.80	+1.3
3,013,108	-		IAI47_14245	0.80	-0.5
3,013,123	+		IAI47_14245	0.81	-0.5
3,013,123	+		IAI47_14245	0.81	-0.1
3,013,124	-		IAI47_14245	0.81	+0.1
3,013,124	-		IAI47_14245	0.81	-0.4
3,013,124	-		IAI47_14245	0.81	+1.1
3,013,134	+		IAI47_14245	0.82	-3.6
3,013,141	+		IAI47_14245	0.83	+0.4
3,013,142	-		IAI47_14245	0.83	-0.6
3,013,142	-		IAI47_14245	0.83	-0.2
3,013,142	-		IAI47_14245	0.83	-0.5
3,013,142	-		IAI47_14245	0.83	+0.1
3,013,144	+		IAI47_14245	0.83	-0.8
3,013,145	-		IAI47_14245	0.83	-0.7
3,013,165	-		IAI47_14245	0.85	+0.6
3,013,239	-				-0.9
3,013,239	-				+0.3
3,013,239	-				+0.2
3,013,239	-				+0.3
3,013,239	-				+1.7
3,013,239	-				-0.3
3,013,239	-				+0.4
3,013,240	+				-0.5
3,013,240	+				+1.3
3,013,240	+				+0.4
3,013,241	-				-0.3
3,013,241	-				+1.8
3,013,250	+				+2.1
3,013,250	+				-0.5
3,013,251	-				-1.3
3,013,251	-				+2.2
3,013,251	-				+1.3
3,013,251	-				+0.7
3,013,251	-				+1.9
3,013,306	+				-1.4
3,013,324	+				+0.4
3,013,324	+				-0.7
3,013,324	+				-0.6
3,013,324	+				-0.6
3,013,325	-				-0.1
3,013,413	+		IAI47_14250	0.27	-2.0
3,013,414	-		IAI47_14250	0.27	-0.8
3,013,426	+		IAI47_14250	0.31	-1.4
3,013,426	+		IAI47_14250	0.31	+0.2
3,013,426	+		IAI47_14250	0.31	-0.7
3,013,426	+		IAI47_14250	0.31	-0.2
3,013,426	+		IAI47_14250	0.31	-0.7
3,013,426	+		IAI47_14250	0.31	-0.3
3,013,427	-		IAI47_14250	0.31	+1.4
3,013,427	-		IAI47_14250	0.31	+0.4
3,013,427	-		IAI47_14250	0.31	+1.1
3,013,427	-		IAI47_14250	0.31	+1.0
3,013,435	-		IAI47_14250	0.34	+0.4
3,013,510	+		IAI47_14250	0.59	-0.3
3,013,527	+		IAI47_14250	0.65	-0.8
3,013,528	-		IAI47_14250	0.65	+0.9
3,013,541	-		IAI47_14250	0.69	-0.5
3,013,596	+		IAI47_14250	0.88	-1.1
3,013,596	+		IAI47_14250	0.88	+1.8
3,013,596	+		IAI47_14250	0.88	-1.2
3,013,596	+		IAI47_14250	0.88	-0.8
3,013,596	+		IAI47_14250	0.88	+0.2
3,013,596	+		IAI47_14250	0.88	-1.1
3,013,596	+		IAI47_14250	0.88	+0.5
3,013,596	+		IAI47_14250	0.88	-0.2
3,013,596	+		IAI47_14250	0.88	+1.8
3,013,596	+		IAI47_14250	0.88	-0.1
3,013,596	+		IAI47_14250	0.88	+0.6
3,013,596	+		IAI47_14250	0.88	-0.7
3,013,596	+		IAI47_14250	0.88	+0.0
3,013,596	+		IAI47_14250	0.88	-0.7
3,013,596	+		IAI47_14250	0.88	-0.4
3,013,596	+		IAI47_14250	0.88	+0.2
3,013,597	-		IAI47_14250	0.88	-0.4
3,013,597	-		IAI47_14250	0.88	-0.3
3,013,597	-		IAI47_14250	0.88	-0.3
3,013,597	-		IAI47_14250	0.88	+0.9
3,013,597	-		IAI47_14250	0.88	+0.3
3,013,597	-		IAI47_14250	0.88	+0.4
3,013,597	-		IAI47_14250	0.88	-0.5
3,013,597	-		IAI47_14250	0.88	-0.7
3,013,597	-		IAI47_14250	0.88	+1.3
3,013,597	-		IAI47_14250	0.88	+0.4
3,013,597	-		IAI47_14250	0.88	+0.5
3,013,597	-		IAI47_14250	0.88	+0.0
3,013,597	-		IAI47_14250	0.88	+0.4
3,013,597	-		IAI47_14250	0.88	-0.4
3,013,597	-		IAI47_14250	0.88	-0.8
3,013,597	-		IAI47_14250	0.88	+2.7
3,013,597	-		IAI47_14250	0.88	+2.9
3,013,597	-		IAI47_14250	0.88	+0.3
3,013,597	-		IAI47_14250	0.88	+1.0
3,013,597	-		IAI47_14250	0.88	-2.3
3,013,602	+		IAI47_14250	0.90	+0.6
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3,013,695	-		IAI47_14255	0.12	+1.6
3,013,737	-		IAI47_14255	0.20	+0.6
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3,013,783	+		IAI47_14255	0.29	-1.0
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3,014,066	+		IAI47_14255	0.85	-0.6
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