Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_17055 and IAI47_17060 overlap by 4 nucleotides IAI47_17060 and IAI47_17065 are separated by 79 nucleotides IAI47_17065 and IAI47_17070 are separated by 113 nucleotides IAI47_17070 and IAI47_17075 are separated by 127 nucleotides
IAI47_17055: IAI47_17055 - phosphoglucosamine mutase, at 3,616,956 to 3,618,290
_17055
IAI47_17060: IAI47_17060 - dihydropteroate synthase, at 3,618,287 to 3,619,126
_17060
IAI47_17065: IAI47_17065 - ATP-dependent zinc metalloprotease FtsH, at 3,619,206 to 3,621,131
_17065
IAI47_17070: IAI47_17070 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE, at 3,621,245 to 3,621,874
_17070
IAI47_17075: IAI47_17075 - ribosome assembly RNA-binding protein YhbY, at 3,622,002 to 3,622,295
_17075
Position (kb)
3619
3620
3621
3622 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3619.150 kb on + strand at 3619.150 kb on + strand at 3619.150 kb on + strand at 3619.160 kb on + strand at 3619.160 kb on + strand at 3619.161 kb on - strand at 3619.161 kb on - strand at 3619.161 kb on - strand at 3619.207 kb on + strand at 3619.208 kb on - strand at 3619.208 kb on - strand at 3619.208 kb on - strand at 3619.208 kb on - strand at 3619.208 kb on - strand at 3619.208 kb on - strand at 3619.208 kb on - strand at 3619.208 kb on - strand at 3619.216 kb on + strand at 3619.216 kb on + strand at 3619.217 kb on - strand at 3619.217 kb on - strand at 3619.217 kb on - strand at 3619.232 kb on + strand at 3619.233 kb on - strand at 3619.233 kb on - strand at 3619.287 kb on - strand at 3619.287 kb on - strand at 3619.296 kb on - strand at 3621.176 kb on - strand at 3621.176 kb on - strand at 3621.176 kb on - strand at 3621.186 kb on - strand at 3621.189 kb on - strand at 3621.189 kb on - strand at 3621.189 kb on - strand at 3621.189 kb on - strand at 3621.189 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.191 kb on - strand at 3621.202 kb on - strand at 3621.202 kb on - strand at 3621.202 kb on - strand at 3621.202 kb on - strand at 3621.202 kb on - strand at 3621.202 kb on - strand at 3621.248 kb on + strand at 3621.249 kb on - strand at 3621.249 kb on - strand at 3621.907 kb on - strand at 3621.943 kb on - strand at 3621.943 kb on - strand at 3621.943 kb on - strand at 3621.960 kb on - strand at 3621.991 kb on - strand at 3622.014 kb on - strand at 3622.014 kb on - strand at 3622.014 kb on - strand at 3622.068 kb on - strand, within IAI47_17075
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 3,619,150 + +0.2 3,619,150 + +2.2 3,619,150 + +0.3 3,619,160 + +1.6 3,619,160 + -1.0 3,619,161 - +3.0 3,619,161 - -1.3 3,619,161 - -2.9 3,619,207 + -1.0 3,619,208 - -0.3 3,619,208 - +0.2 3,619,208 - +0.3 3,619,208 - -1.7 3,619,208 - +0.9 3,619,208 - -0.0 3,619,208 - -0.5 3,619,208 - +0.8 3,619,216 + -0.4 3,619,216 + -1.9 3,619,217 - -0.7 3,619,217 - -1.3 3,619,217 - +0.7 3,619,232 + -1.1 3,619,233 - -0.5 3,619,233 - +2.0 3,619,287 - -1.6 3,619,287 - -0.3 3,619,296 - +0.4 3,621,176 - -0.1 3,621,176 - -2.1 3,621,176 - -0.2 3,621,186 - -3.4 3,621,189 - -0.1 3,621,189 - -1.9 3,621,189 - -2.5 3,621,189 - -2.9 3,621,189 - -2.3 3,621,191 - +0.7 3,621,191 - -2.5 3,621,191 - -0.5 3,621,191 - +1.2 3,621,191 - -1.8 3,621,191 - -2.3 3,621,191 - -1.7 3,621,191 - -1.6 3,621,191 - -0.7 3,621,191 - -2.3 3,621,191 - -1.4 3,621,202 - +0.0 3,621,202 - -0.7 3,621,202 - +1.8 3,621,202 - -1.1 3,621,202 - -2.1 3,621,202 - -2.7 3,621,248 + -2.1 3,621,249 - -0.3 3,621,249 - +0.3 3,621,907 - -1.2 3,621,943 - -0.8 3,621,943 - +0.6 3,621,943 - -1.5 3,621,960 - -0.4 3,621,991 - -0.1 3,622,014 - +0.5 3,622,014 - +2.2 3,622,014 - +1.4 3,622,068 - IAI47_17075 0.22 +1.1
Or see this region's nucleotide sequence