Strain Fitness in Pantoea sp. MT58 around IAI47_16545

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,501,102	+				-1.6
3,501,102	+				-0.1
3,501,103	-				-0.5
3,501,103	-				+0.9
3,501,103	-				+1.0
3,501,120	+				+0.4
3,501,120	+				+0.3
3,501,121	-				-0.5
3,501,121	-				-0.8
3,501,121	-				+1.1
3,501,124	-				+0.5
3,501,128	+				-0.1
3,501,129	-				-0.0
3,501,148	+				-0.2
3,501,162	+				-0.6
3,501,162	+				-2.0
3,501,163	-				+0.4
3,501,163	-				+0.4
3,501,163	-				+0.5
3,501,165	-				+2.9
3,501,165	-				+1.1
3,501,205	+				-1.9
3,501,205	+				+2.3
3,501,205	+				-0.5
3,501,206	-				+1.5
3,501,206	-				-0.1
3,501,225	-				-0.8
3,501,240	-				+0.2
3,501,271	+		IAI47_16535	0.10	+0.5
3,501,271	+		IAI47_16535	0.10	+0.8
3,501,272	-		IAI47_16535	0.10	-2.0
3,501,272	-		IAI47_16535	0.10	-0.2
3,501,304	+		IAI47_16535	0.21	-0.2
3,501,305	-		IAI47_16535	0.22	-0.7
3,501,346	+		IAI47_16535	0.35	+1.0
3,501,346	+		IAI47_16535	0.35	+0.9
3,501,347	-		IAI47_16535	0.36	-1.0
3,501,353	-		IAI47_16535	0.38	-0.4
3,501,363	+		IAI47_16535	0.41	-0.1
3,501,363	+		IAI47_16535	0.41	-2.0
3,501,364	-		IAI47_16535	0.41	+1.1
3,501,364	-		IAI47_16535	0.41	-0.7
3,501,385	-		IAI47_16535	0.48	-0.6
3,501,410	-		IAI47_16535	0.57	-1.7
3,501,410	-		IAI47_16535	0.57	-0.6
3,501,420	-		IAI47_16535	0.60	+2.3
3,501,420	-		IAI47_16535	0.60	-0.1
3,501,424	+		IAI47_16535	0.62	-1.3
3,501,424	+		IAI47_16535	0.62	+1.1
3,501,430	+		IAI47_16535	0.64	-2.4
3,501,431	-		IAI47_16535	0.64	-0.2
3,501,432	+		IAI47_16535	0.64	+0.3
3,501,432	+		IAI47_16535	0.64	+0.2
3,501,433	-		IAI47_16535	0.65	-0.1
3,501,433	-		IAI47_16535	0.65	+1.1
3,501,433	-		IAI47_16535	0.65	+0.7
3,501,480	+		IAI47_16535	0.80	-1.6
3,501,480	+		IAI47_16535	0.80	-1.1
3,501,480	+		IAI47_16535	0.80	+2.3
3,501,480	+		IAI47_16535	0.80	+0.4
3,501,481	-		IAI47_16535	0.81	-1.3
3,501,481	-		IAI47_16535	0.81	-0.4
3,501,482	+		IAI47_16535	0.81	-0.1
3,501,482	+		IAI47_16535	0.81	-1.7
3,501,482	+		IAI47_16535	0.81	+0.6
3,501,483	-		IAI47_16535	0.81	-0.4
3,501,483	-		IAI47_16535	0.81	-1.7
3,501,483	-		IAI47_16535	0.81	-0.3
3,501,492	+		IAI47_16535	0.85	-1.4
3,501,493	-		IAI47_16535	0.85	-0.5
3,501,496	+		IAI47_16535	0.86	-0.6
3,501,569	+		IAI47_16540	0.11	+0.3
3,501,612	+		IAI47_16540	0.24	-0.8
3,501,612	+		IAI47_16540	0.24	-2.9
3,501,612	+		IAI47_16540	0.24	+0.4
3,501,612	+		IAI47_16540	0.24	+0.4
3,501,612	+		IAI47_16540	0.24	-1.9
3,501,612	+		IAI47_16540	0.24	-0.0
3,501,613	-		IAI47_16540	0.24	-0.3
3,501,665	+		IAI47_16540	0.40	-0.6
3,501,665	+		IAI47_16540	0.40	+0.3
3,501,665	+		IAI47_16540	0.40	+0.0
3,501,665	+		IAI47_16540	0.40	-0.4
3,501,666	-		IAI47_16540	0.40	-0.9
3,501,666	-		IAI47_16540	0.40	-0.1
3,501,666	-		IAI47_16540	0.40	+1.3
3,501,666	-		IAI47_16540	0.40	+1.3
3,501,666	-		IAI47_16540	0.40	-2.1
3,501,666	-		IAI47_16540	0.40	+0.4
3,501,678	+		IAI47_16540	0.44	+0.3
3,501,679	-		IAI47_16540	0.44	+1.4
3,501,679	-		IAI47_16540	0.44	-0.7
3,501,684	+		IAI47_16540	0.45	-1.4
3,501,685	-		IAI47_16540	0.46	-0.3
3,501,685	-		IAI47_16540	0.46	+3.8
3,501,685	-		IAI47_16540	0.46	-0.6
3,501,685	-		IAI47_16540	0.46	+1.1
3,501,690	+		IAI47_16540	0.47	-0.4
3,501,690	+		IAI47_16540	0.47	+0.2
3,501,691	-		IAI47_16540	0.48	+0.3
3,501,691	-		IAI47_16540	0.48	-0.1
3,501,691	-		IAI47_16540	0.48	+0.0
3,501,693	+		IAI47_16540	0.48	+0.6
3,501,693	+		IAI47_16540	0.48	+0.5
3,501,693	+		IAI47_16540	0.48	-0.5
3,501,693	+		IAI47_16540	0.48	-0.1
3,501,693	+		IAI47_16540	0.48	+0.6
3,501,693	+		IAI47_16540	0.48	+1.0
3,501,693	+		IAI47_16540	0.48	-0.5
3,501,693	+		IAI47_16540	0.48	-0.0
3,501,694	-		IAI47_16540	0.48	+0.9
3,501,694	-		IAI47_16540	0.48	+0.3
3,501,694	-		IAI47_16540	0.48	-1.2
3,501,694	-		IAI47_16540	0.48	+1.5
3,501,694	-		IAI47_16540	0.48	-0.4
3,501,698	+		IAI47_16540	0.50	+0.4
3,501,698	+		IAI47_16540	0.50	+0.0
3,501,698	+		IAI47_16540	0.50	+0.6
3,501,699	-		IAI47_16540	0.50	-1.2
3,501,699	-		IAI47_16540	0.50	-0.8
3,501,699	-		IAI47_16540	0.50	-0.6
3,501,699	-		IAI47_16540	0.50	+0.0
3,501,699	-		IAI47_16540	0.50	+1.3
3,501,763	+		IAI47_16540	0.69	-0.3
3,501,795	+		IAI47_16540	0.79	+0.5
3,501,795	+		IAI47_16540	0.79	-1.9
3,501,845	+				+0.6
3,501,846	-				-0.6
3,501,846	-				-0.4
3,501,846	-				-0.6
3,501,867	+				+1.4
3,501,868	-				-0.7
3,501,868	-				-0.7
3,501,871	-				-0.5
3,501,871	-				+0.1
3,501,880	-				-1.1
3,501,883	+				-1.7
3,501,886	+				+0.6
3,501,887	-				-0.8
3,501,934	+				+0.2
3,501,944	+				+0.3
3,501,944	+				-0.6
3,501,945	-				-1.5
3,501,945	-				-0.4
3,501,949	-				-2.1
3,501,949	-				+0.6
3,501,949	-				+0.5
3,501,995	-				+0.8
3,502,026	-				-1.2
3,502,051	+				+1.1
3,502,256	+		IAI47_16545	0.12	+0.1
3,502,257	-		IAI47_16545	0.12	-2.0
3,502,276	-		IAI47_16545	0.14	+0.7
3,502,312	+		IAI47_16545	0.16	+0.5
3,502,330	-		IAI47_16545	0.18	-0.6
3,502,389	+		IAI47_16545	0.22	+2.9
3,502,390	-		IAI47_16545	0.22	-0.1
3,502,390	-		IAI47_16545	0.22	-0.6
3,502,447	+		IAI47_16545	0.26	-0.5
3,502,469	+		IAI47_16545	0.28	-1.7
3,502,469	+		IAI47_16545	0.28	+0.0
3,502,470	-		IAI47_16545	0.28	-0.8
3,502,473	+		IAI47_16545	0.28	+0.7
3,502,491	-		IAI47_16545	0.30	-0.0
3,502,599	-		IAI47_16545	0.38	-0.9
3,502,666	-		IAI47_16545	0.43	-1.4
3,502,725	+		IAI47_16545	0.47	-0.5
3,502,728	+		IAI47_16545	0.47	-0.2
3,502,729	-		IAI47_16545	0.47	-1.3
3,502,733	+		IAI47_16545	0.48	-0.5
3,502,736	+		IAI47_16545	0.48	+0.3
3,502,775	+		IAI47_16545	0.51	+0.4
3,502,805	+		IAI47_16545	0.53	-0.2
3,502,806	-		IAI47_16545	0.53	+1.0
3,502,842	-		IAI47_16545	0.56	-1.2
3,502,844	-		IAI47_16545	0.56	-1.2
3,502,865	+		IAI47_16545	0.57	+0.2
3,502,866	-		IAI47_16545	0.57	-0.6
3,503,021	+		IAI47_16545	0.69	-0.3
3,503,025	-		IAI47_16545	0.69	-0.7
3,503,064	+		IAI47_16545	0.72	-2.5
3,503,064	+		IAI47_16545	0.72	+2.3
3,503,065	-		IAI47_16545	0.72	-0.9
3,503,065	-		IAI47_16545	0.72	-1.0
3,503,067	+		IAI47_16545	0.72	-0.9
3,503,067	+		IAI47_16545	0.72	-0.6
3,503,068	-		IAI47_16545	0.72	-0.3
3,503,068	-		IAI47_16545	0.72	-2.6
3,503,115	-		IAI47_16545	0.76	-1.1
3,503,115	-		IAI47_16545	0.76	-0.4
3,503,116	+		IAI47_16545	0.76	-1.6
3,503,167	+		IAI47_16545	0.80	-0.6
3,503,167	+		IAI47_16545	0.80	-2.0
3,503,167	+		IAI47_16545	0.80	-0.5
3,503,168	-		IAI47_16545	0.80	+0.7
3,503,168	-		IAI47_16545	0.80	-0.6
3,503,168	-		IAI47_16545	0.80	-0.9
3,503,168	-		IAI47_16545	0.80	+0.7
3,503,270	+		IAI47_16545	0.87	-0.7
3,503,270	+		IAI47_16545	0.87	-0.4
3,503,271	-		IAI47_16545	0.87	-1.5
3,503,271	-		IAI47_16545	0.87	-1.3
3,503,272	+		IAI47_16545	0.87	-0.9
3,503,272	+		IAI47_16545	0.87	+0.0
3,503,272	+		IAI47_16545	0.87	-0.6
3,503,272	+		IAI47_16545	0.87	-0.5
3,503,272	+		IAI47_16545	0.87	+0.1
3,503,273	-		IAI47_16545	0.88	+0.6
3,503,273	-		IAI47_16545	0.88	-0.7
3,503,304	-		IAI47_16545	0.90	-0.3
3,503,321	+				+0.6
3,503,322	-				-1.2
3,503,322	-				-0.5
3,503,323	+				-1.6
3,503,324	-				+0.4
3,503,324	-				-1.2
3,503,324	-				+0.7
3,503,324	-				-1.4
3,503,346	-				+0.3
3,503,379	+				-0.8
3,503,379	+				-2.1
3,503,380	-				-2.3
3,503,380	-				-0.3
3,503,380	-				-0.3
3,503,380	-				+1.3
3,503,388	+				+0.3
3,503,389	-				-0.0
3,503,389	-				+0.7
3,503,578	+				-0.7
3,503,617	+		IAI47_16550	0.11	-1.8
3,503,617	+		IAI47_16550	0.11	+0.3
3,503,617	+		IAI47_16550	0.11	+0.0
3,503,617	+		IAI47_16550	0.11	-1.4
3,503,618	-		IAI47_16550	0.11	+2.1
3,503,636	-		IAI47_16550	0.12	-0.5
3,503,717	-		IAI47_16550	0.18	+1.9
3,503,741	+		IAI47_16550	0.19	-1.0
3,503,762	-		IAI47_16550	0.20	-0.8
3,503,762	-		IAI47_16550	0.20	+0.7
3,503,792	+		IAI47_16550	0.22	-0.6
3,503,793	-		IAI47_16550	0.22	+0.3
3,503,793	-		IAI47_16550	0.22	+1.6
3,503,816	+		IAI47_16550	0.24	-0.6
3,503,816	+		IAI47_16550	0.24	-1.1
3,503,816	+		IAI47_16550	0.24	+0.9
3,503,817	-		IAI47_16550	0.24	-0.4
3,503,817	-		IAI47_16550	0.24	+0.3
3,503,817	-		IAI47_16550	0.24	+1.6
3,503,817	-		IAI47_16550	0.24	+0.9
3,503,834	+		IAI47_16550	0.25	-1.0
3,503,834	+		IAI47_16550	0.25	-1.5
3,503,879	-		IAI47_16550	0.28	+1.6
3,503,879	-		IAI47_16550	0.28	+0.0
3,503,895	+		IAI47_16550	0.29	-1.3
3,503,895	+		IAI47_16550	0.29	-0.6
3,503,895	+		IAI47_16550	0.29	-0.6
3,503,896	-		IAI47_16550	0.29	+0.7
3,503,896	-		IAI47_16550	0.29	-0.5
3,503,923	+		IAI47_16550	0.31	-0.5
3,503,924	-		IAI47_16550	0.31	+0.8
3,503,992	-		IAI47_16550	0.35	-0.1
3,504,019	+		IAI47_16550	0.37	-1.1
3,504,019	+		IAI47_16550	0.37	-1.1
3,504,020	-		IAI47_16550	0.37	+0.3
3,504,020	-		IAI47_16550	0.37	-0.3
3,504,022	+		IAI47_16550	0.37	-1.5
3,504,022	+		IAI47_16550	0.37	+0.1
3,504,022	+		IAI47_16550	0.37	-0.6
3,504,023	-		IAI47_16550	0.37	+0.6
3,504,023	-		IAI47_16550	0.37	+1.0
3,504,023	-		IAI47_16550	0.37	-0.7
3,504,023	-		IAI47_16550	0.37	-0.6
3,504,023	-		IAI47_16550	0.37	-1.0
3,504,023	-		IAI47_16550	0.37	+0.8
3,504,023	-		IAI47_16550	0.37	+0.2
3,504,023	-		IAI47_16550	0.37	-0.2
3,504,026	+		IAI47_16550	0.37	-0.9
3,504,026	+		IAI47_16550	0.37	+0.4
3,504,026	+		IAI47_16550	0.37	-1.8
3,504,026	+		IAI47_16550	0.37	-1.0
3,504,026	+		IAI47_16550	0.37	-0.9
3,504,026	+		IAI47_16550	0.37	-0.3
3,504,026	+		IAI47_16550	0.37	+0.3
3,504,026	+		IAI47_16550	0.37	-0.8
3,504,026	+		IAI47_16550	0.37	+0.2
3,504,026	+		IAI47_16550	0.37	-1.9
3,504,027	-		IAI47_16550	0.37	-0.9
3,504,027	-		IAI47_16550	0.37	-0.3
3,504,027	-		IAI47_16550	0.37	-0.3
3,504,027	-		IAI47_16550	0.37	-0.4
3,504,027	-		IAI47_16550	0.37	+1.0
3,504,027	-		IAI47_16550	0.37	-1.7
3,504,027	-		IAI47_16550	0.37	-0.8
3,504,027	-		IAI47_16550	0.37	-0.6
3,504,027	-		IAI47_16550	0.37	+1.7
3,504,027	-		IAI47_16550	0.37	+0.2
3,504,027	-		IAI47_16550	0.37	-1.1
3,504,027	-		IAI47_16550	0.37	+0.3
3,504,027	-		IAI47_16550	0.37	+1.2
3,504,037	+		IAI47_16550	0.38	-0.7
3,504,037	+		IAI47_16550	0.38	+0.4
3,504,037	+		IAI47_16550	0.38	-1.4
3,504,037	+		IAI47_16550	0.38	-1.3
3,504,037	+		IAI47_16550	0.38	-1.9
3,504,038	-		IAI47_16550	0.38	-0.7
3,504,038	-		IAI47_16550	0.38	-0.3
3,504,038	-		IAI47_16550	0.38	-1.7
3,504,038	-		IAI47_16550	0.38	-0.6
3,504,038	-		IAI47_16550	0.38	+0.3
3,504,038	-		IAI47_16550	0.38	-0.3
3,504,038	-		IAI47_16550	0.38	+0.3
3,504,101	+		IAI47_16550	0.42	-0.2
3,504,101	+		IAI47_16550	0.42	-1.1
3,504,101	+		IAI47_16550	0.42	-0.7
3,504,101	+		IAI47_16550	0.42	-0.5
3,504,102	-		IAI47_16550	0.42	-0.8
3,504,102	-		IAI47_16550	0.42	-1.4
3,504,102	-		IAI47_16550	0.42	-0.4
3,504,102	-		IAI47_16550	0.42	+1.5
3,504,143	-		IAI47_16550	0.44	-0.5
3,504,152	-		IAI47_16550	0.45	+0.6
3,504,152	-		IAI47_16550	0.45	-0.8
3,504,152	-		IAI47_16550	0.45	+1.4
3,504,191	-		IAI47_16550	0.47	-0.2
3,504,326	+		IAI47_16550	0.56	+0.3
3,504,326	+		IAI47_16550	0.56	-2.0
3,504,326	+		IAI47_16550	0.56	-0.9
3,504,326	+		IAI47_16550	0.56	-1.4
3,504,326	+		IAI47_16550	0.56	-0.9
3,504,326	+		IAI47_16550	0.56	-0.5
3,504,327	-		IAI47_16550	0.56	+0.4
3,504,327	-		IAI47_16550	0.56	-1.1
3,504,327	-		IAI47_16550	0.56	-0.7
3,504,327	-		IAI47_16550	0.56	-0.1
3,504,327	-		IAI47_16550	0.56	-1.0
3,504,327	-		IAI47_16550	0.56	-2.5
3,504,422	-		IAI47_16550	0.62	+4.0
3,504,422	-		IAI47_16550	0.62	-0.8