Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06082 and H281DRAFT_06083 are separated by 174 nucleotides H281DRAFT_06083 and H281DRAFT_06084 are separated by 143 nucleotides H281DRAFT_06084 and H281DRAFT_06085 are separated by 446 nucleotides
H281DRAFT_06082: H281DRAFT_06082 - ATP-dependent Clp protease ATP-binding subunit ClpC, at 98,477 to 101,311
_06082
H281DRAFT_06083: H281DRAFT_06083 - heat shock protein Hsp20, at 101,486 to 102,121
_06083
H281DRAFT_06084: H281DRAFT_06084 - Uncharacterized membrane protein HdeD, DUF308 family, at 102,265 to 102,840
_06084
H281DRAFT_06085: H281DRAFT_06085 - transcriptional regulator, AraC family, at 103,287 to 104,114
_06085
Position (kb) 102
103 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 101.649 kb on + strand, within H281DRAFT_06083 at 101.876 kb on + strand, within H281DRAFT_06083 at 102.275 kb on - strand at 102.275 kb on - strand at 102.521 kb on - strand, within H281DRAFT_06084 at 102.570 kb on + strand, within H281DRAFT_06084 at 102.570 kb on + strand, within H281DRAFT_06084 at 102.571 kb on - strand, within H281DRAFT_06084 at 102.574 kb on - strand, within H281DRAFT_06084 at 102.737 kb on - strand, within H281DRAFT_06084 at 102.830 kb on - strand at 103.045 kb on - strand at 103.249 kb on + strand at 103.249 kb on + strand at 103.250 kb on - strand at 103.300 kb on + strand at 103.301 kb on - strand at 103.554 kb on - strand, within H281DRAFT_06085 at 103.778 kb on + strand, within H281DRAFT_06085 at 103.779 kb on - strand, within H281DRAFT_06085
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 101,649 + H281DRAFT_06083 0.26 +0.6 101,876 + H281DRAFT_06083 0.61 -1.2 102,275 - +0.2 102,275 - -2.9 102,521 - H281DRAFT_06084 0.44 -0.9 102,570 + H281DRAFT_06084 0.53 +1.3 102,570 + H281DRAFT_06084 0.53 +0.1 102,571 - H281DRAFT_06084 0.53 +0.5 102,574 - H281DRAFT_06084 0.54 -2.7 102,737 - H281DRAFT_06084 0.82 -0.9 102,830 - -1.2 103,045 - +0.2 103,249 + +0.8 103,249 + +0.8 103,250 - +0.1 103,300 + +1.0 103,301 - -2.0 103,554 - H281DRAFT_06085 0.32 +1.4 103,778 + H281DRAFT_06085 0.59 +1.0 103,779 - H281DRAFT_06085 0.59 -0.5
Or see this region's nucleotide sequence