Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05467 and H281DRAFT_05468 are separated by 190 nucleotides H281DRAFT_05468 and H281DRAFT_05469 are separated by 83 nucleotides H281DRAFT_05469 and H281DRAFT_05470 are separated by 186 nucleotides
H281DRAFT_05467: H281DRAFT_05467 - hypothetical protein, at 48,115 to 48,465
_05467
H281DRAFT_05468: H281DRAFT_05468 - Transposase Tn5 dimerisation domain-containing protein, at 48,656 to 49,006
_05468
H281DRAFT_05469: H281DRAFT_05469 - transcriptional regulator, IclR family, at 49,090 to 49,830
_05469
H281DRAFT_05470: H281DRAFT_05470 - hypothetical protein, at 50,017 to 50,346
_05470
Position (kb)
49
50 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 48.159 kb on + strand, within H281DRAFT_05467 at 48.160 kb on - strand, within H281DRAFT_05467 at 48.242 kb on - strand, within H281DRAFT_05467 at 48.260 kb on + strand, within H281DRAFT_05467 at 48.261 kb on - strand, within H281DRAFT_05467 at 48.665 kb on - strand at 48.945 kb on + strand, within H281DRAFT_05468 at 48.946 kb on - strand, within H281DRAFT_05468 at 48.973 kb on + strand at 49.028 kb on + strand at 49.028 kb on + strand at 49.029 kb on - strand at 49.086 kb on + strand at 49.086 kb on + strand at 49.127 kb on + strand at 49.208 kb on - strand, within H281DRAFT_05469 at 49.208 kb on - strand, within H281DRAFT_05469 at 49.235 kb on + strand at 49.295 kb on - strand, within H281DRAFT_05469 at 49.719 kb on - strand, within H281DRAFT_05469 at 49.734 kb on - strand, within H281DRAFT_05469 at 49.812 kb on - strand at 49.986 kb on - strand at 50.012 kb on - strand at 50.012 kb on - strand at 50.012 kb on - strand at 50.012 kb on - strand at 50.012 kb on - strand at 50.245 kb on + strand, within H281DRAFT_05470 at 50.342 kb on + strand at 50.343 kb on - strand at 50.343 kb on - strand at 50.516 kb on + strand at 50.520 kb on + strand at 50.521 kb on - strand at 50.697 kb on + strand at 50.819 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 48,159 + H281DRAFT_05467 0.13 +0.5 48,160 - H281DRAFT_05467 0.13 +0.8 48,242 - H281DRAFT_05467 0.36 -0.2 48,260 + H281DRAFT_05467 0.41 -0.4 48,261 - H281DRAFT_05467 0.42 -1.1 48,665 - -0.2 48,945 + H281DRAFT_05468 0.82 -0.5 48,946 - H281DRAFT_05468 0.83 -1.1 48,973 + +0.5 49,028 + -2.6 49,028 + +0.5 49,029 - +0.5 49,086 + +0.1 49,086 + -0.1 49,127 + -1.1 49,208 - H281DRAFT_05469 0.16 -3.4 49,208 - H281DRAFT_05469 0.16 -0.9 49,235 + -0.7 49,295 - H281DRAFT_05469 0.28 -1.0 49,719 - H281DRAFT_05469 0.85 -0.6 49,734 - H281DRAFT_05469 0.87 -0.4 49,812 - -0.1 49,986 - +0.1 50,012 - -0.7 50,012 - -0.2 50,012 - -2.7 50,012 - -1.7 50,012 - +0.4 50,245 + H281DRAFT_05470 0.69 +0.5 50,342 + -1.2 50,343 - +0.8 50,343 - -2.1 50,516 + +0.6 50,520 + -0.0 50,521 - +0.7 50,697 + -0.5 50,819 - +0.2
Or see this region's nucleotide sequence