Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02485 and H281DRAFT_02486 are separated by 111 nucleotides H281DRAFT_02486 and H281DRAFT_02487 are separated by 51 nucleotides H281DRAFT_02487 and H281DRAFT_02488 overlap by 4 nucleotides
H281DRAFT_02485: H281DRAFT_02485 - gamma-glutamyltranspeptidase / glutathione hydrolase, at 58,111 to 59,775
_02485
H281DRAFT_02486: H281DRAFT_02486 - oxalate/formate antiporter, at 59,887 to 61,191
_02486
H281DRAFT_02487: H281DRAFT_02487 - NitT/TauT family transport system ATP-binding protein, at 61,243 to 62,019
_02487
H281DRAFT_02488: H281DRAFT_02488 - NitT/TauT family transport system permease protein, at 62,016 to 62,870
_02488
Position (kb) 59
60
61
62 Strain fitness (log2 ratio) -2
-1
0
1 at 58.927 kb on + strand, within H281DRAFT_02485 at 58.927 kb on + strand, within H281DRAFT_02485 at 59.273 kb on - strand, within H281DRAFT_02485 at 59.738 kb on - strand at 59.774 kb on - strand at 59.875 kb on - strand at 60.030 kb on - strand, within H281DRAFT_02486 at 60.086 kb on + strand, within H281DRAFT_02486 at 60.087 kb on - strand, within H281DRAFT_02486 at 60.250 kb on + strand at 61.269 kb on + strand at 61.270 kb on - strand at 61.598 kb on - strand, within H281DRAFT_02487 at 61.609 kb on + strand, within H281DRAFT_02487 at 61.610 kb on - strand, within H281DRAFT_02487 at 61.811 kb on + strand, within H281DRAFT_02487 at 61.865 kb on + strand, within H281DRAFT_02487 at 61.901 kb on - strand, within H281DRAFT_02487 at 62.039 kb on + strand at 62.149 kb on + strand, within H281DRAFT_02488
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 58,927 + H281DRAFT_02485 0.49 -1.5 58,927 + H281DRAFT_02485 0.49 +0.0 59,273 - H281DRAFT_02485 0.70 -2.6 59,738 - +0.0 59,774 - -0.9 59,875 - +1.2 60,030 - H281DRAFT_02486 0.11 -2.1 60,086 + H281DRAFT_02486 0.15 -2.7 60,087 - H281DRAFT_02486 0.15 -0.1 60,250 + -1.2 61,269 + +0.3 61,270 - -0.7 61,598 - H281DRAFT_02487 0.46 -0.7 61,609 + H281DRAFT_02487 0.47 +1.0 61,610 - H281DRAFT_02487 0.47 +0.9 61,811 + H281DRAFT_02487 0.73 +0.3 61,865 + H281DRAFT_02487 0.80 -1.3 61,901 - H281DRAFT_02487 0.85 -0.8 62,039 + -1.9 62,149 + H281DRAFT_02488 0.16 -0.0
Or see this region's nucleotide sequence