Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02066 and H281DRAFT_02067 are separated by 588 nucleotides H281DRAFT_02067 and H281DRAFT_02068 are separated by 119 nucleotides
H281DRAFT_02066: H281DRAFT_02066 - hypothetical protein, at 187,500 to 188,372
_02066
H281DRAFT_02067: H281DRAFT_02067 - hypothetical protein, at 188,961 to 189,839
_02067
H281DRAFT_02068: H281DRAFT_02068 - enoyl-CoA hydratase, at 189,959 to 190,810
_02068
Position (kb) 188
189
190 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 187.970 kb on - strand, within H281DRAFT_02066 at 188.373 kb on - strand at 188.396 kb on - strand at 188.396 kb on - strand at 188.396 kb on - strand at 188.396 kb on - strand at 188.396 kb on - strand at 188.417 kb on + strand at 188.417 kb on + strand at 188.417 kb on + strand at 188.418 kb on - strand at 188.418 kb on - strand at 188.418 kb on - strand at 188.418 kb on - strand at 188.423 kb on + strand at 188.424 kb on - strand at 188.424 kb on - strand at 188.582 kb on + strand at 188.582 kb on + strand at 188.582 kb on + strand at 188.583 kb on - strand at 188.632 kb on + strand at 188.632 kb on + strand at 188.633 kb on - strand at 188.633 kb on - strand at 188.772 kb on + strand at 188.773 kb on - strand at 189.141 kb on + strand, within H281DRAFT_02067 at 189.642 kb on - strand, within H281DRAFT_02067 at 189.642 kb on - strand, within H281DRAFT_02067 at 189.925 kb on + strand at 189.925 kb on + strand at 189.925 kb on + strand at 189.925 kb on + strand at 189.935 kb on + strand at 189.935 kb on + strand at 190.123 kb on - strand at 190.123 kb on - strand, within H281DRAFT_02068 at 190.275 kb on + strand, within H281DRAFT_02068 at 190.275 kb on + strand, within H281DRAFT_02068 at 190.276 kb on - strand, within H281DRAFT_02068 at 190.276 kb on - strand, within H281DRAFT_02068 at 190.276 kb on - strand, within H281DRAFT_02068 at 190.276 kb on - strand, within H281DRAFT_02068 at 190.276 kb on - strand, within H281DRAFT_02068 at 190.278 kb on + strand, within H281DRAFT_02068 at 190.278 kb on + strand, within H281DRAFT_02068 at 190.278 kb on + strand, within H281DRAFT_02068 at 190.278 kb on + strand, within H281DRAFT_02068 at 190.278 kb on + strand, within H281DRAFT_02068 at 190.278 kb on + strand, within H281DRAFT_02068 at 190.279 kb on - strand, within H281DRAFT_02068 at 190.279 kb on - strand, within H281DRAFT_02068 at 190.279 kb on - strand, within H281DRAFT_02068 at 190.279 kb on - strand, within H281DRAFT_02068 at 190.304 kb on + strand, within H281DRAFT_02068 at 190.366 kb on + strand, within H281DRAFT_02068 at 190.478 kb on - strand, within H281DRAFT_02068 at 190.485 kb on + strand, within H281DRAFT_02068 at 190.485 kb on + strand, within H281DRAFT_02068 at 190.486 kb on - strand, within H281DRAFT_02068 at 190.776 kb on + strand at 190.776 kb on + strand at 190.777 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 187,970 - H281DRAFT_02066 0.54 -2.2 188,373 - +2.8 188,396 - -1.3 188,396 - -2.3 188,396 - -2.1 188,396 - +1.4 188,396 - -2.4 188,417 + +1.1 188,417 + +1.3 188,417 + -0.6 188,418 - -0.3 188,418 - +0.7 188,418 - +0.5 188,418 - +1.3 188,423 + +1.0 188,424 - -0.6 188,424 - +1.3 188,582 + -0.3 188,582 + -1.4 188,582 + +0.3 188,583 - -0.7 188,632 + -1.1 188,632 + +0.7 188,633 - -0.4 188,633 - +2.1 188,772 + -0.9 188,773 - +1.3 189,141 + H281DRAFT_02067 0.20 -0.6 189,642 - H281DRAFT_02067 0.77 +0.1 189,642 - H281DRAFT_02067 0.77 +0.5 189,925 + +0.1 189,925 + +0.5 189,925 + -3.2 189,925 + -0.3 189,935 + -2.3 189,935 + -0.1 190,123 - +1.1 190,123 - H281DRAFT_02068 0.19 +0.5 190,275 + H281DRAFT_02068 0.37 +0.3 190,275 + H281DRAFT_02068 0.37 +0.7 190,276 - H281DRAFT_02068 0.37 +0.4 190,276 - H281DRAFT_02068 0.37 -0.5 190,276 - H281DRAFT_02068 0.37 +1.6 190,276 - H281DRAFT_02068 0.37 -1.2 190,276 - H281DRAFT_02068 0.37 +0.7 190,278 + H281DRAFT_02068 0.37 +0.0 190,278 + H281DRAFT_02068 0.37 +0.6 190,278 + H281DRAFT_02068 0.37 +1.1 190,278 + H281DRAFT_02068 0.37 -0.2 190,278 + H281DRAFT_02068 0.37 +0.5 190,278 + H281DRAFT_02068 0.37 -1.0 190,279 - H281DRAFT_02068 0.38 +0.6 190,279 - H281DRAFT_02068 0.38 +0.3 190,279 - H281DRAFT_02068 0.38 +0.2 190,279 - H281DRAFT_02068 0.38 -0.7 190,304 + H281DRAFT_02068 0.40 -1.0 190,366 + H281DRAFT_02068 0.48 +0.1 190,478 - H281DRAFT_02068 0.61 -0.1 190,485 + H281DRAFT_02068 0.62 +1.1 190,485 + H281DRAFT_02068 0.62 +0.9 190,486 - H281DRAFT_02068 0.62 +0.7 190,776 + +2.2 190,776 + -0.6 190,777 - -0.7
Or see this region's nucleotide sequence