Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02026 and H281DRAFT_02027 are separated by 656 nucleotides H281DRAFT_02027 and H281DRAFT_02028 are separated by 372 nucleotides
H281DRAFT_02026: H281DRAFT_02026 - DNA sulfur modification protein DndC, at 144,283 to 145,314
_02026
H281DRAFT_02027: H281DRAFT_02027 - transposase, at 145,971 to 146,321
_02027
H281DRAFT_02028: H281DRAFT_02028 - Transposase, at 146,694 to 148,286
_02028
Position (kb) 145
146
147 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 145.031 kb on + strand, within H281DRAFT_02026 at 145.032 kb on - strand, within H281DRAFT_02026 at 145.080 kb on + strand, within H281DRAFT_02026 at 145.080 kb on + strand, within H281DRAFT_02026 at 145.080 kb on + strand, within H281DRAFT_02026 at 145.081 kb on - strand, within H281DRAFT_02026 at 145.081 kb on - strand, within H281DRAFT_02026 at 145.226 kb on + strand at 145.286 kb on + strand at 145.367 kb on + strand at 145.379 kb on + strand at 145.379 kb on + strand at 145.379 kb on + strand at 145.379 kb on + strand at 145.380 kb on - strand at 145.380 kb on - strand at 145.380 kb on - strand at 145.381 kb on + strand at 145.381 kb on + strand at 145.382 kb on - strand at 145.402 kb on + strand at 145.402 kb on + strand at 145.402 kb on + strand at 145.403 kb on - strand at 145.403 kb on - strand at 145.406 kb on + strand at 145.406 kb on + strand at 145.406 kb on + strand at 145.406 kb on + strand at 145.414 kb on - strand at 145.461 kb on + strand at 145.518 kb on - strand at 145.565 kb on + strand at 145.566 kb on - strand at 145.566 kb on - strand at 145.567 kb on + strand at 145.567 kb on + strand at 145.567 kb on + strand at 145.567 kb on + strand at 145.567 kb on + strand at 145.568 kb on - strand at 145.568 kb on - strand at 145.687 kb on - strand at 145.710 kb on + strand at 145.711 kb on - strand at 145.711 kb on - strand at 145.838 kb on + strand at 145.838 kb on + strand at 145.838 kb on + strand at 145.838 kb on + strand at 145.838 kb on + strand at 145.838 kb on + strand at 145.838 kb on + strand at 145.839 kb on - strand at 145.839 kb on - strand at 145.839 kb on - strand at 145.839 kb on - strand at 145.839 kb on - strand at 145.839 kb on - strand at 145.839 kb on - strand at 145.839 kb on - strand at 145.865 kb on + strand at 145.866 kb on - strand at 145.885 kb on + strand at 145.885 kb on + strand at 145.885 kb on + strand at 145.886 kb on - strand at 145.889 kb on - strand at 145.916 kb on + strand at 145.916 kb on + strand at 145.917 kb on - strand at 145.938 kb on + strand at 145.938 kb on + strand at 145.938 kb on + strand at 145.938 kb on + strand at 145.939 kb on - strand at 145.939 kb on - strand at 146.013 kb on + strand, within H281DRAFT_02027 at 146.041 kb on + strand, within H281DRAFT_02027 at 146.041 kb on + strand at 146.080 kb on + strand, within H281DRAFT_02027 at 146.080 kb on + strand, within H281DRAFT_02027 at 146.080 kb on + strand, within H281DRAFT_02027 at 146.080 kb on + strand, within H281DRAFT_02027 at 146.081 kb on - strand, within H281DRAFT_02027 at 146.081 kb on - strand, within H281DRAFT_02027 at 146.081 kb on - strand, within H281DRAFT_02027 at 146.154 kb on - strand, within H281DRAFT_02027 at 146.364 kb on + strand at 146.371 kb on + strand at 146.372 kb on - strand at 146.572 kb on + strand at 146.573 kb on - strand at 146.596 kb on - strand at 146.662 kb on + strand at 146.663 kb on - strand at 146.663 kb on - strand at 146.663 kb on - strand at 146.888 kb on + strand, within H281DRAFT_02028 at 146.888 kb on + strand, within H281DRAFT_02028 at 146.960 kb on + strand, within H281DRAFT_02028 at 147.156 kb on + strand, within H281DRAFT_02028 at 147.156 kb on + strand, within H281DRAFT_02028 at 147.156 kb on + strand, within H281DRAFT_02028 at 147.157 kb on - strand, within H281DRAFT_02028 at 147.157 kb on - strand, within H281DRAFT_02028 at 147.160 kb on + strand, within H281DRAFT_02028 at 147.161 kb on - strand, within H281DRAFT_02028 at 147.161 kb on - strand, within H281DRAFT_02028 at 147.190 kb on + strand, within H281DRAFT_02028 at 147.191 kb on - strand, within H281DRAFT_02028 at 147.191 kb on - strand, within H281DRAFT_02028 at 147.191 kb on - strand, within H281DRAFT_02028 at 147.191 kb on - strand, within H281DRAFT_02028
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 145,031 + H281DRAFT_02026 0.72 -0.1 145,032 - H281DRAFT_02026 0.73 -1.6 145,080 + H281DRAFT_02026 0.77 -0.8 145,080 + H281DRAFT_02026 0.77 +0.1 145,080 + H281DRAFT_02026 0.77 +0.8 145,081 - H281DRAFT_02026 0.77 -0.4 145,081 - H281DRAFT_02026 0.77 +0.2 145,226 + -0.4 145,286 + +1.1 145,367 + +0.3 145,379 + -0.5 145,379 + -1.2 145,379 + -0.1 145,379 + -0.0 145,380 - +0.8 145,380 - -0.4 145,380 - +0.2 145,381 + +0.3 145,381 + +0.3 145,382 - +0.4 145,402 + +1.1 145,402 + +0.5 145,402 + +0.6 145,403 - +0.1 145,403 - +0.4 145,406 + +0.6 145,406 + +0.1 145,406 + -1.1 145,406 + -0.1 145,414 - +0.3 145,461 + +0.0 145,518 - -0.9 145,565 + -3.0 145,566 - +0.8 145,566 - +1.0 145,567 + -1.2 145,567 + -1.0 145,567 + +0.5 145,567 + +0.1 145,567 + -1.4 145,568 - +0.3 145,568 - -1.0 145,687 - -1.3 145,710 + +0.6 145,711 - +0.0 145,711 - -1.4 145,838 + -0.2 145,838 + +0.7 145,838 + -0.5 145,838 + +0.2 145,838 + +0.6 145,838 + -0.3 145,838 + +0.8 145,839 - -0.3 145,839 - +0.2 145,839 - -0.1 145,839 - +0.8 145,839 - -0.2 145,839 - +0.5 145,839 - +0.6 145,839 - +1.3 145,865 + +0.6 145,866 - -0.1 145,885 + +0.2 145,885 + -0.9 145,885 + +0.9 145,886 - +0.0 145,889 - -0.2 145,916 + -1.2 145,916 + +0.6 145,917 - +0.7 145,938 + +1.0 145,938 + +0.7 145,938 + -0.2 145,938 + +1.1 145,939 - +0.3 145,939 - -0.9 146,013 + H281DRAFT_02027 0.12 -0.8 146,041 + H281DRAFT_02027 0.20 -0.1 146,041 + +2.4 146,080 + H281DRAFT_02027 0.31 +0.8 146,080 + H281DRAFT_02027 0.31 -1.2 146,080 + H281DRAFT_02027 0.31 +0.4 146,080 + H281DRAFT_02027 0.31 -1.6 146,081 - H281DRAFT_02027 0.31 -0.3 146,081 - H281DRAFT_02027 0.31 -0.3 146,081 - H281DRAFT_02027 0.31 -0.3 146,154 - H281DRAFT_02027 0.52 -0.2 146,364 + +0.5 146,371 + -0.9 146,372 - +0.3 146,572 + +0.2 146,573 - +0.0 146,596 - +0.5 146,662 + +0.2 146,663 - -0.6 146,663 - +0.2 146,663 - +1.0 146,888 + H281DRAFT_02028 0.12 -0.4 146,888 + H281DRAFT_02028 0.12 -1.5 146,960 + H281DRAFT_02028 0.17 -0.9 147,156 + H281DRAFT_02028 0.29 +0.4 147,156 + H281DRAFT_02028 0.29 +0.9 147,156 + H281DRAFT_02028 0.29 +2.7 147,157 - H281DRAFT_02028 0.29 +0.3 147,157 - H281DRAFT_02028 0.29 +0.1 147,160 + H281DRAFT_02028 0.29 +0.1 147,161 - H281DRAFT_02028 0.29 +0.5 147,161 - H281DRAFT_02028 0.29 +0.1 147,190 + H281DRAFT_02028 0.31 +0.2 147,191 - H281DRAFT_02028 0.31 +0.9 147,191 - H281DRAFT_02028 0.31 -0.8 147,191 - H281DRAFT_02028 0.31 +0.2 147,191 - H281DRAFT_02028 0.31 -1.0
Or see this region's nucleotide sequence