Experiment: Hexanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00939 and H281DRAFT_00940 are separated by 222 nucleotides H281DRAFT_00940 and H281DRAFT_00941 are separated by 441 nucleotides H281DRAFT_00941 and H281DRAFT_00942 are separated by 572 nucleotides
H281DRAFT_00939: H281DRAFT_00939 - hypothetical protein, at 1,043,686 to 1,044,138
_00939
H281DRAFT_00940: H281DRAFT_00940 - psiF repeat-containing protein, at 1,044,361 to 1,044,654
_00940
H281DRAFT_00941: H281DRAFT_00941 - hypothetical protein, at 1,045,096 to 1,045,392
_00941
H281DRAFT_00942: H281DRAFT_00942 - Transposase, at 1,045,965 to 1,047,359
_00942
Position (kb)
1045
1046 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1044.123 kb on + strand at 1044.123 kb on + strand at 1044.229 kb on + strand at 1044.230 kb on - strand at 1044.230 kb on - strand at 1044.306 kb on + strand at 1044.307 kb on - strand at 1044.405 kb on + strand, within H281DRAFT_00940 at 1044.406 kb on - strand, within H281DRAFT_00940 at 1044.556 kb on - strand, within H281DRAFT_00940 at 1044.622 kb on + strand, within H281DRAFT_00940 at 1044.674 kb on - strand at 1044.708 kb on + strand at 1044.708 kb on + strand at 1044.709 kb on - strand at 1044.811 kb on + strand at 1044.812 kb on - strand at 1044.909 kb on + strand at 1044.910 kb on - strand at 1044.991 kb on - strand at 1045.000 kb on + strand at 1045.030 kb on + strand at 1045.102 kb on + strand at 1045.102 kb on + strand at 1045.103 kb on - strand at 1045.103 kb on - strand at 1045.114 kb on + strand at 1045.115 kb on - strand at 1045.115 kb on - strand at 1045.391 kb on - strand at 1045.391 kb on - strand at 1045.536 kb on - strand at 1045.536 kb on - strand at 1045.586 kb on + strand at 1045.708 kb on + strand at 1045.709 kb on - strand at 1045.732 kb on + strand at 1045.733 kb on - strand at 1045.756 kb on + strand at 1045.830 kb on - strand at 1045.871 kb on + strand at 1045.871 kb on + strand at 1045.872 kb on - strand at 1045.872 kb on - strand at 1045.890 kb on + strand at 1045.982 kb on - strand at 1045.982 kb on - strand at 1046.156 kb on + strand, within H281DRAFT_00942 at 1046.247 kb on + strand, within H281DRAFT_00942 at 1046.248 kb on - strand, within H281DRAFT_00942 at 1046.248 kb on - strand, within H281DRAFT_00942 at 1046.248 kb on - strand, within H281DRAFT_00942
Per-strain Table
Position Strand Gene LocusTag Fraction Hexanoic (C) remove 1,044,123 + -3.2 1,044,123 + +0.2 1,044,229 + -2.0 1,044,230 - +0.6 1,044,230 - -0.6 1,044,306 + +0.2 1,044,307 - -1.1 1,044,405 + H281DRAFT_00940 0.15 +0.7 1,044,406 - H281DRAFT_00940 0.15 +0.2 1,044,556 - H281DRAFT_00940 0.66 -0.2 1,044,622 + H281DRAFT_00940 0.89 +1.7 1,044,674 - -0.1 1,044,708 + +3.0 1,044,708 + -0.1 1,044,709 - +0.5 1,044,811 + -0.5 1,044,812 - +0.9 1,044,909 + -2.6 1,044,910 - -0.5 1,044,991 - -0.9 1,045,000 + -0.8 1,045,030 + -0.4 1,045,102 + +1.1 1,045,102 + -1.2 1,045,103 - -0.4 1,045,103 - +0.5 1,045,114 + +0.5 1,045,115 - -0.4 1,045,115 - -2.8 1,045,391 - -1.2 1,045,391 - +1.4 1,045,536 - -0.2 1,045,536 - +0.2 1,045,586 + +1.0 1,045,708 + +1.5 1,045,709 - -0.6 1,045,732 + +1.6 1,045,733 - -0.7 1,045,756 + +1.3 1,045,830 - +0.0 1,045,871 + +1.1 1,045,871 + -0.3 1,045,872 - -1.3 1,045,872 - -0.1 1,045,890 + +0.5 1,045,982 - -0.1 1,045,982 - -0.6 1,046,156 + H281DRAFT_00942 0.14 +0.9 1,046,247 + H281DRAFT_00942 0.20 +0.2 1,046,248 - H281DRAFT_00942 0.20 -0.9 1,046,248 - H281DRAFT_00942 0.20 -0.6 1,046,248 - H281DRAFT_00942 0.20 -0.1
Or see this region's nucleotide sequence