Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03776

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
3,941,918	-		CCNA_03774	0.47	+2.2
3,941,951	+		CCNA_03774	0.50	+0.3
3,941,957	-		CCNA_03774	0.51	+3.6
3,942,005	+		CCNA_03774	0.57	-0.9
3,942,017	+		CCNA_03774	0.58	-1.2
3,942,025	-		CCNA_03774	0.59	-0.3
3,942,029	+		CCNA_03774	0.59	+1.4
3,942,034	+		CCNA_03774	0.60	-0.3
3,942,037	-		CCNA_03774	0.60	-1.3
3,942,037	-		CCNA_03774	0.60	-1.0
3,942,042	-		CCNA_03774	0.61	+1.2
3,942,044	+		CCNA_03774	0.61	+2.2
3,942,051	+		CCNA_03774	0.62	+0.7
3,942,051	+		CCNA_03774	0.62	+0.6
3,942,067	-		CCNA_03774	0.64	-1.6
3,942,074	-		CCNA_03774	0.64	+1.0
3,942,091	-		CCNA_03774	0.66	-1.8
3,942,091	-		CCNA_03774	0.66	-0.6
3,942,110	-		CCNA_03774	0.68	+0.2
3,942,116	-		CCNA_03774	0.69	-0.9
3,942,186	-		CCNA_03774	0.77	+0.5
3,942,195	+		CCNA_03774	0.78	+0.3
3,942,274	-		CCNA_03774	0.87	-2.8
3,942,277	+		CCNA_03774	0.87	+1.6
3,942,323	+				+0.7
3,942,341	+				+0.3
3,942,343	+				-0.8
3,942,349	-				-0.9
3,942,349	-				-1.1
3,942,349	-				-1.6
3,942,351	-				-3.1
3,942,351	-				-1.2
3,942,354	-				-1.7
3,942,406	-				-0.2
3,942,416	-				+0.7
3,942,416	-				-0.4
3,942,416	-				+0.5
3,942,420	+				+0.3
3,942,420	+				-0.1
3,942,425	+				+0.3
3,942,428	-				-0.6
3,942,428	-				+0.9
3,942,428	-				-2.2
3,942,435	-				-1.3
3,942,435	-				-1.6
3,942,515	+				-2.8
3,942,515	+				-1.5
3,942,518	-				-0.4
3,942,521	+				-1.7
3,942,521	+				-0.7
3,942,625	+		CCNA_03775	0.26	-2.1
3,942,649	-		CCNA_03775	0.32	+1.4
3,942,654	-		CCNA_03775	0.34	+0.4
3,942,698	+		CCNA_03775	0.45	-0.0
3,942,698	+		CCNA_03775	0.45	+0.5
3,942,698	+		CCNA_03775	0.45	-1.9
3,942,712	+		CCNA_03775	0.49	+1.2
3,942,712	+		CCNA_03775	0.49	+0.5
3,942,712	+		CCNA_03775	0.49	+1.0
3,942,713	-		CCNA_03775	0.49	-0.6
3,942,713	-		CCNA_03775	0.49	+0.2
3,942,713	-		CCNA_03775	0.49	-0.9
3,942,718	-		CCNA_03775	0.50	-0.2
3,942,720	-		CCNA_03775	0.51	+1.3
3,942,733	+		CCNA_03775	0.54	-0.7
3,942,733	+		CCNA_03775	0.54	-0.0
3,942,733	+		CCNA_03775	0.54	-0.5
3,942,741	-		CCNA_03775	0.56	-1.9
3,942,741	-		CCNA_03775	0.56	+0.6
3,942,741	-		CCNA_03775	0.56	-1.8
3,942,746	-		CCNA_03775	0.58	-2.7
3,942,772	+		CCNA_03775	0.64	-1.9
3,942,794	+		CCNA_03775	0.70	+0.4
3,942,802	-		CCNA_03775	0.72	-0.2
3,942,802	-		CCNA_03775	0.72	-0.9
3,942,812	+		CCNA_03775	0.75	+0.2
3,942,910	-				-2.2
3,942,946	+				-0.9
3,942,970	+		CCNA_03776	0.11	-2.5
3,942,982	-		CCNA_03776	0.14	-1.0
3,943,003	-		CCNA_03776	0.17	+0.9
3,943,021	+		CCNA_03776	0.21	+0.1
3,943,027	-		CCNA_03776	0.22	-0.4
3,943,047	-		CCNA_03776	0.26	+1.5
3,943,064	+		CCNA_03776	0.29	+0.8
3,943,074	+		CCNA_03776	0.31	+0.9
3,943,082	-		CCNA_03776	0.32	+1.5
3,943,093	+		CCNA_03776	0.34	-0.9
3,943,093	+		CCNA_03776	0.34	+1.6
3,943,093	+		CCNA_03776	0.34	+1.4
3,943,098	-		CCNA_03776	0.35	-0.0
3,943,099	-		CCNA_03776	0.35	+0.8
3,943,184	+		CCNA_03776	0.51	+0.3
3,943,184	-		CCNA_03776	0.51	+1.2
3,943,206	-		CCNA_03776	0.55	-0.7
3,943,229	-		CCNA_03776	0.59	-0.2
3,943,231	+		CCNA_03776	0.60	-1.8
3,943,234	-		CCNA_03776	0.60	+2.8
3,943,234	-		CCNA_03776	0.60	+2.7
3,943,234	-		CCNA_03776	0.60	+0.8
3,943,234	-		CCNA_03776	0.60	+2.0
3,943,244	-		CCNA_03776	0.62	+1.7
3,943,244	-		CCNA_03776	0.62	-2.7
3,943,266	+		CCNA_03776	0.66	+0.3
3,943,274	-		CCNA_03776	0.68	+1.3
3,943,274	-		CCNA_03776	0.68	+2.3
3,943,326	+		CCNA_03776	0.77	+1.5
3,943,326	+		CCNA_03776	0.77	-1.7
3,943,326	+		CCNA_03776	0.77	-0.0
3,943,326	+		CCNA_03776	0.77	-2.0
3,943,331	+		CCNA_03776	0.78	+3.1
3,943,334	-		CCNA_03776	0.79	+1.1
3,943,334	-		CCNA_03776	0.79	+2.6
3,943,346	+		CCNA_03776	0.81	-1.8
3,943,377	-		CCNA_03776	0.87	+1.9
3,943,472	+				+0.1
3,943,472	+				-1.2
3,943,496	-				-1.1
3,943,505	+				+0.8
3,943,505	+				-2.8
3,943,522	+				-2.2
3,943,553	+				-1.0
3,943,641	+		CCNA_03777	0.17	-0.6
3,943,662	-		CCNA_03777	0.19	+0.9
3,943,665	+		CCNA_03777	0.19	+1.3
3,943,665	+		CCNA_03777	0.19	+0.2
3,943,665	+		CCNA_03777	0.19	+0.9
3,943,668	-		CCNA_03777	0.20	+1.3
3,943,668	-		CCNA_03777	0.20	-0.7
3,943,673	-		CCNA_03777	0.20	+1.6
3,943,686	+		CCNA_03777	0.21	-1.1
3,943,721	+		CCNA_03777	0.25	-2.1
3,943,723	+		CCNA_03777	0.25	-1.6
3,943,729	-		CCNA_03777	0.25	-0.2
3,943,729	-		CCNA_03777	0.25	-1.5
3,943,729	-		CCNA_03777	0.25	+2.6
3,943,747	+		CCNA_03777	0.27	-2.6
3,943,768	-		CCNA_03777	0.29	+0.5
3,943,770	-		CCNA_03777	0.29	+1.7
3,943,787	+		CCNA_03777	0.31	+0.3
3,943,792	+		CCNA_03777	0.31	-1.1
3,943,800	-		CCNA_03777	0.32	+2.1
3,943,870	+		CCNA_03777	0.39	-2.2
3,943,878	-		CCNA_03777	0.40	-0.3
3,943,883	-		CCNA_03777	0.40	-1.4
3,943,883	-		CCNA_03777	0.40	+0.9
3,943,884	-		CCNA_03777	0.40	-1.6
3,943,923	-		CCNA_03777	0.44	+1.1
3,944,050	+		CCNA_03777	0.56	-0.4
3,944,094	+		CCNA_03777	0.60	+1.1
3,944,099	+		CCNA_03777	0.60	+0.6
3,944,099	+		CCNA_03777	0.60	+1.0
3,944,102	-		CCNA_03777	0.61	-0.7
3,944,102	-		CCNA_03777	0.61	-0.2
3,944,107	-		CCNA_03777	0.61	+2.4
3,944,112	-		CCNA_03777	0.62	+0.5
3,944,118	+		CCNA_03777	0.62	-2.0
3,944,132	+		CCNA_03777	0.64	-0.5
3,944,177	+				-2.7
3,944,182	+		CCNA_03777	0.68	+0.5
3,944,190	-		CCNA_03777	0.69	+1.4
3,944,212	-		CCNA_03777	0.71	-1.0
3,944,212	-		CCNA_03777	0.71	+2.5
3,944,221	-		CCNA_03777	0.72	-2.8
3,944,253	+		CCNA_03777	0.75	-1.0
3,944,253	+		CCNA_03777	0.75	+1.8
3,944,261	-		CCNA_03777	0.76	+1.2
3,944,261	-		CCNA_03777	0.76	+1.8
3,944,261	-		CCNA_03777	0.76	+0.6
3,944,298	+		CCNA_03777	0.79	+0.9
3,944,306	-		CCNA_03777	0.80	-0.5
3,944,333	-		CCNA_03777	0.83	+0.6
3,944,353	+		CCNA_03777	0.85	-2.3
3,944,361	+		CCNA_03777	0.85	-2.4
3,944,362	-		CCNA_03777	0.85	-0.0
3,944,369	-		CCNA_03777	0.86	+1.1
3,944,393	-		CCNA_03777	0.88	-0.5
3,944,405	-		CCNA_03777	0.90	+0.7
3,944,420	-				+0.7
3,944,420	-				+0.6
3,944,420	-				+0.7