Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02899

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
3,050,669	-		CCNA_02898	0.43	-1.7
3,050,674	-		CCNA_02898	0.43	-0.7
3,050,696	-		CCNA_02898	0.45	-0.2
3,050,721	-		CCNA_02898	0.46	-0.1
3,050,732	+		CCNA_02898	0.47	-1.1
3,050,739	-		CCNA_02898	0.48	+1.1
3,050,756	-		CCNA_02898	0.49	+0.1
3,050,758	-		CCNA_02898	0.49	-0.9
3,050,786	+		CCNA_02898	0.51	-1.4
3,050,786	+		CCNA_02898	0.51	-2.0
3,050,786	+		CCNA_02898	0.51	-0.9
3,050,786	-		CCNA_02898	0.51	+0.3
3,050,791	-		CCNA_02898	0.51	+2.7
3,050,791	-		CCNA_02898	0.51	-0.3
3,050,794	-		CCNA_02898	0.51	+0.9
3,050,837	+		CCNA_02898	0.54	+1.7
3,050,850	-		CCNA_02898	0.55	-0.2
3,050,864	+		CCNA_02898	0.56	+0.9
3,050,865	-		CCNA_02898	0.56	+0.9
3,050,909	-				+1.7
3,050,918	+		CCNA_02898	0.59	-0.2
3,050,921	-		CCNA_02898	0.59	-1.3
3,050,921	-		CCNA_02898	0.59	-0.9
3,050,931	-		CCNA_02898	0.60	-1.4
3,050,959	+		CCNA_02898	0.62	+1.2
3,050,967	-		CCNA_02898	0.62	-1.8
3,050,974	+		CCNA_02898	0.63	-2.3
3,050,997	-		CCNA_02898	0.64	-0.4
3,051,002	+		CCNA_02898	0.65	+2.7
3,051,016	+		CCNA_02898	0.66	+2.7
3,051,016	+		CCNA_02898	0.66	-2.0
3,051,017	+		CCNA_02898	0.66	-0.5
3,051,024	-		CCNA_02898	0.66	-0.3
3,051,027	+		CCNA_02898	0.66	-0.5
3,051,065	-		CCNA_02898	0.69	-0.9
3,051,072	+		CCNA_02898	0.69	-1.7
3,051,128	+		CCNA_02898	0.73	+2.7
3,051,139	-		CCNA_02898	0.74	-0.5
3,051,182	+		CCNA_02898	0.76	+0.8
3,051,198	-		CCNA_02898	0.78	-0.3
3,051,217	-		CCNA_02898	0.79	+1.7
3,051,243	+		CCNA_02898	0.80	-2.0
3,051,247	+		CCNA_02898	0.81	-0.6
3,051,255	-		CCNA_02898	0.81	+0.3
3,051,316	+		CCNA_02898	0.85	+0.2
3,051,316	-		CCNA_02898	0.85	+3.3
3,051,316	-		CCNA_02898	0.85	-1.8
3,051,324	-		CCNA_02898	0.86	-0.9
3,051,366	-		CCNA_02898	0.88	-2.4
3,051,388	+		CCNA_02898	0.90	+0.7
3,051,389	+				+0.7
3,051,404	-				+1.7
3,051,418	-				-1.3
3,051,461	-				-2.2
3,051,466	-				-0.2
3,051,466	-				+2.7
3,051,482	-				-1.6
3,051,491	+				+0.3
3,051,496	+				-1.3
3,051,504	-				-2.4
3,051,537	-				-2.7
3,051,542	+				-1.6
3,051,542	+				-2.3
3,051,549	-				+0.7
3,051,610	+				-1.3
3,051,621	-				+0.1
3,051,623	+				-1.4
3,051,641	-				-0.1
3,051,643	-				-2.6
3,051,669	+				-1.3
3,051,711	-		CCNA_02899	0.11	-1.4
3,051,734	+		CCNA_02899	0.13	-2.1
3,051,734	+		CCNA_02899	0.13	+0.7
3,051,822	+		CCNA_02899	0.19	-2.2
3,051,828	-		CCNA_02899	0.19	+0.5
3,051,832	-		CCNA_02899	0.19	-1.9
3,051,878	-		CCNA_02899	0.22	-0.3
3,051,886	-				+2.7
3,051,886	-		CCNA_02899	0.23	-1.3
3,051,887	-		CCNA_02899	0.23	-1.1
3,051,926	+		CCNA_02899	0.26	+0.1
3,051,941	+		CCNA_02899	0.27	+0.4
3,051,957	+		CCNA_02899	0.28	-2.1
3,051,980	-		CCNA_02899	0.29	+3.2
3,052,082	+		CCNA_02899	0.36	-1.3
3,052,090	-		CCNA_02899	0.37	-1.6
3,052,134	+		CCNA_02899	0.39	-0.8
3,052,202	+		CCNA_02899	0.44	-1.3
3,052,290	-		CCNA_02899	0.50	-1.3
3,052,295	-		CCNA_02899	0.50	-0.4
3,052,304	+		CCNA_02899	0.51	+0.7
3,052,357	-		CCNA_02899	0.54	-1.7
3,052,366	+		CCNA_02899	0.55	-0.9
3,052,375	+		CCNA_02899	0.55	-1.2
3,052,439	+		CCNA_02899	0.60	-1.2
3,052,470	-		CCNA_02899	0.62	-1.3
3,052,472	+		CCNA_02899	0.62	-0.5
3,052,477	+		CCNA_02899	0.62	+0.1
3,052,485	-		CCNA_02899	0.63	+0.2
3,052,495	-		CCNA_02899	0.63	+0.7
3,052,523	+		CCNA_02899	0.65	+0.1
3,052,590	+		CCNA_02899	0.70	+0.3
3,052,655	-		CCNA_02899	0.74	+1.4
3,052,661	+		CCNA_02899	0.74	-0.6
3,052,719	+		CCNA_02899	0.78	-0.7
3,052,719	+		CCNA_02899	0.78	+1.1
3,052,719	+		CCNA_02899	0.78	-2.9
3,052,793	-		CCNA_02899	0.83	+5.6
3,052,809	+		CCNA_02899	0.84	-1.2
3,052,809	+		CCNA_02899	0.84	-0.6
3,052,817	-		CCNA_02899	0.85	+0.3
3,052,817	-		CCNA_02899	0.85	+2.4
3,052,817	-		CCNA_02899	0.85	+1.4
3,052,824	-		CCNA_02899	0.85	-1.7
3,052,824	-		CCNA_02899	0.85	-1.1
3,052,824	-		CCNA_02899	0.85	-1.4
3,052,830	-		CCNA_02899	0.85	-0.4
3,052,841	+		CCNA_02899	0.86	+0.7
3,052,851	+		CCNA_02899	0.87	-2.7
3,052,868	+		CCNA_02899	0.88	+0.9
3,052,870	-		CCNA_02899	0.88	-0.2
3,052,933	+				-2.8
3,052,936	-				-0.7
3,052,944	+				+2.4
3,052,944	+				+1.4
3,052,952	-				-0.9
3,052,952	-				+0.7
3,053,008	+				-0.9
3,053,041	-				+0.3
3,053,079	-				+1.1
3,053,094	+				-2.4
3,053,102	-				-1.2
3,053,123	-				+0.3
3,053,124	+				-0.5
3,053,132	-				+0.4
3,053,142	+				-1.8
3,053,149	+				-0.7
3,053,186	+				-0.6
3,053,192	-				+1.6
3,053,202	-				+0.4
3,053,208	+				-0.2
3,053,216	-				+1.5
3,053,289	+				+0.3
3,053,290	-				-0.9
3,053,295	+				-1.7
3,053,297	-				+0.6
3,053,297	-				+1.1
3,053,303	-				-1.6
3,053,303	-				+0.6
3,053,313	-		CCNA_02900	0.11	+1.9
3,053,322	-		CCNA_02900	0.11	+1.3
3,053,357	-		CCNA_02900	0.14	-0.3
3,053,399	+		CCNA_02900	0.17	+0.3
3,053,399	+		CCNA_02900	0.17	-1.9
3,053,402	-		CCNA_02900	0.17	+1.7
3,053,407	-		CCNA_02900	0.18	+2.1
3,053,430	+		CCNA_02900	0.19	-1.9
3,053,430	+		CCNA_02900	0.19	+0.7
3,053,430	+		CCNA_02900	0.19	+0.7
3,053,430	+		CCNA_02900	0.19	-2.3
3,053,430	+		CCNA_02900	0.19	-0.9
3,053,438	+		CCNA_02900	0.20	+0.8
3,053,438	-		CCNA_02900	0.20	+1.8
3,053,446	-		CCNA_02900	0.21	+2.9
3,053,456	+		CCNA_02900	0.21	-3.3
3,053,464	-		CCNA_02900	0.22	+1.0
3,053,464	-		CCNA_02900	0.22	-0.2
3,053,543	-		CCNA_02900	0.28	+0.3
3,053,586	+		CCNA_02900	0.31	+0.1
3,053,591	+		CCNA_02900	0.32	-1.9
3,053,594	-		CCNA_02900	0.32	+2.1
3,053,627	+		CCNA_02900	0.34	+1.1
3,053,639	-		CCNA_02900	0.35	+2.4
3,053,677	-		CCNA_02900	0.38	-1.7
3,053,691	+		CCNA_02900	0.39	-0.2
3,053,708	+		CCNA_02900	0.41	-0.4
3,053,711	+		CCNA_02900	0.41	-3.1
3,053,720	+		CCNA_02900	0.42	+0.6
3,053,745	+				-1.4
3,053,752	+		CCNA_02900	0.44	+1.9
3,053,755	-		CCNA_02900	0.44	+2.3
3,053,758	+		CCNA_02900	0.44	-0.2
3,053,784	-		CCNA_02900	0.46	-1.8
3,053,800	+		CCNA_02900	0.48	-0.2
3,053,808	+		CCNA_02900	0.48	+0.5
3,053,812	+		CCNA_02900	0.49	-2.7
3,053,860	-		CCNA_02900	0.52	+0.0
3,053,880	-		CCNA_02900	0.54	-0.8
3,053,905	-		CCNA_02900	0.56	-2.0
3,053,913	+		CCNA_02900	0.56	+0.3
3,053,934	+		CCNA_02900	0.58	-0.7
3,053,973	+		CCNA_02900	0.61	-1.2
3,053,986	-		CCNA_02900	0.62	+1.2
3,054,017	-		CCNA_02900	0.64	+2.6