Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02809

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
2,962,996	-		CCNA_02807	0.57	+2.7
2,963,050	-		CCNA_02807	0.61	-0.1
2,963,058	-		CCNA_02807	0.62	-1.4
2,963,224	+		CCNA_02807	0.75	-1.3
2,963,235	+		CCNA_02807	0.76	-0.0
2,963,265	-		CCNA_02807	0.78	+0.1
2,963,316	+		CCNA_02807	0.83	-1.8
2,963,347	-		CCNA_02807	0.85	-2.1
2,963,347	-		CCNA_02807	0.85	+0.4
2,963,348	-		CCNA_02807	0.85	-0.5
2,963,406	+				-1.0
2,963,411	+				-1.4
2,963,437	+				-2.3
2,963,460	-				-0.1
2,963,467	-				-0.3
2,963,476	+				-1.5
2,963,486	+				+2.7
2,963,507	+				+0.9
2,963,507	+				+1.2
2,963,507	+				+1.3
2,963,517	+				+0.4
2,963,521	-				-1.7
2,963,539	-				+0.0
2,963,600	+		CCNA_02808	0.21	-1.9
2,963,613	-		CCNA_02808	0.24	+0.6
2,963,618	-		CCNA_02808	0.25	-0.4
2,963,634	+		CCNA_02808	0.28	+0.5
2,963,636	-		CCNA_02808	0.28	-1.1
2,963,666	-		CCNA_02808	0.35	-1.4
2,963,670	+		CCNA_02808	0.35	+0.8
2,963,670	+		CCNA_02808	0.35	-0.6
2,963,712	-		CCNA_02808	0.44	-2.2
2,963,725	+		CCNA_02808	0.47	+1.1
2,963,863	-		CCNA_02808	0.76	+1.4
2,963,881	+		CCNA_02808	0.79	-1.9
2,963,884	-		CCNA_02808	0.80	-0.4
2,963,886	+		CCNA_02808	0.80	-1.4
2,963,889	-		CCNA_02808	0.81	-1.2
2,963,894	-		CCNA_02808	0.82	-0.1
2,963,927	-		CCNA_02808	0.89	-0.1
2,963,927	-		CCNA_02808	0.89	-1.5
2,963,938	+				-0.6
2,963,938	+				-0.2
2,963,951	-				+0.1
2,963,951	-				-1.6
2,963,997	-				-2.5
2,964,005	-				-0.4
2,964,041	+				-2.9
2,964,058	+				-1.0
2,964,058	+				-0.3
2,964,164	-				-1.6
2,964,207	+				+0.9
2,964,246	+				+2.7
2,964,279	+				+3.8
2,964,279	+				+1.2
2,964,279	+				+1.7
2,964,279	+				+0.4
2,964,287	-				-0.4
2,964,312	+		CCNA_02809	0.10	-2.0
2,964,312	+		CCNA_02809	0.10	+0.5
2,964,320	-		CCNA_02809	0.11	+0.1
2,964,320	-		CCNA_02809	0.11	+1.1
2,964,320	-		CCNA_02809	0.11	-2.5
2,964,320	-		CCNA_02809	0.11	+1.7
2,964,333	+		CCNA_02809	0.11	-0.6
2,964,338	+		CCNA_02809	0.11	-0.4
2,964,338	+		CCNA_02809	0.11	+0.8
2,964,346	-		CCNA_02809	0.11	+0.1
2,964,354	-		CCNA_02809	0.12	+0.7
2,964,373	+		CCNA_02809	0.12	+1.1
2,964,373	+		CCNA_02809	0.12	-2.2
2,964,373	+		CCNA_02809	0.12	+0.9
2,964,381	-		CCNA_02809	0.12	+1.7
2,964,381	-		CCNA_02809	0.12	-1.4
2,964,381	-		CCNA_02809	0.12	+1.9
2,964,381	-		CCNA_02809	0.12	+1.7
2,964,381	-		CCNA_02809	0.12	+1.1
2,964,390	+		CCNA_02809	0.13	-0.3
2,964,390	+		CCNA_02809	0.13	-3.0
2,964,395	+		CCNA_02809	0.13	-0.1
2,964,398	-		CCNA_02809	0.13	+0.7
2,964,403	-		CCNA_02809	0.13	-1.8
2,964,433	+		CCNA_02809	0.14	-2.7
2,964,433	+		CCNA_02809	0.14	-1.3
2,964,440	+		CCNA_02809	0.14	+2.7
2,964,441	-		CCNA_02809	0.14	-0.7
2,964,448	-		CCNA_02809	0.15	-0.5
2,964,448	-		CCNA_02809	0.15	-0.8
2,964,448	-		CCNA_02809	0.15	-1.7
2,964,448	-		CCNA_02809	0.15	-1.4
2,964,448	-		CCNA_02809	0.15	+1.7
2,964,449	-		CCNA_02809	0.15	-1.7
2,964,453	+		CCNA_02809	0.15	+0.1
2,964,528	+		CCNA_02809	0.17	+1.1
2,964,543	+		CCNA_02809	0.17	+0.2
2,964,543	+		CCNA_02809	0.17	+1.5
2,964,548	+		CCNA_02809	0.18	+1.7
2,964,569	+		CCNA_02809	0.18	+0.4
2,964,577	-		CCNA_02809	0.19	-1.2
2,964,659	+		CCNA_02809	0.21	-1.1
2,964,661	+		CCNA_02809	0.21	-2.1
2,964,757	-		CCNA_02809	0.24	-0.1
2,964,759	-		CCNA_02809	0.24	-1.3
2,964,823	+		CCNA_02809	0.26	-1.9
2,964,828	+		CCNA_02809	0.26	-1.2
2,964,828	+		CCNA_02809	0.26	-2.9
2,964,840	+		CCNA_02809	0.27	+1.7
2,964,864	-		CCNA_02809	0.27	+0.7
2,964,878	+		CCNA_02809	0.28	-0.8
2,964,928	+		CCNA_02809	0.29	-3.4
2,964,928	+		CCNA_02809	0.29	+2.7
2,964,928	+		CCNA_02809	0.29	+2.8
2,964,936	-		CCNA_02809	0.30	-2.6
2,964,942	+		CCNA_02809	0.30	-2.0
2,964,942	+		CCNA_02809	0.30	-2.1
2,964,955	-		CCNA_02809	0.30	+1.7
2,964,997	+		CCNA_02809	0.31	-1.4
2,965,003	-		CCNA_02809	0.32	-1.8
2,965,015	+		CCNA_02809	0.32	-2.1
2,965,023	+		CCNA_02809	0.32	+2.7
2,965,033	+		CCNA_02809	0.33	-0.6
2,965,041	-		CCNA_02809	0.33	-1.3
2,965,042	+		CCNA_02809	0.33	-2.6
2,965,042	+		CCNA_02809	0.33	-1.7
2,965,051	-		CCNA_02809	0.33	+2.5
2,965,052	+		CCNA_02809	0.33	-0.5
2,965,060	-		CCNA_02809	0.33	-1.7
2,965,064	+		CCNA_02809	0.34	-1.0
2,965,064	+		CCNA_02809	0.34	-0.6
2,965,064	+		CCNA_02809	0.34	-0.7
2,965,078	+		CCNA_02809	0.34	-0.8
2,965,090	-		CCNA_02809	0.34	-0.8
2,965,149	+		CCNA_02809	0.36	+0.5
2,965,149	+		CCNA_02809	0.36	-2.8
2,965,149	+		CCNA_02809	0.36	+0.1
2,965,149	+		CCNA_02809	0.36	-1.4
2,965,149	+		CCNA_02809	0.36	-0.5
2,965,149	+		CCNA_02809	0.36	-2.0
2,965,149	+		CCNA_02809	0.36	+0.7
2,965,149	+		CCNA_02809	0.36	+0.8
2,965,149	+		CCNA_02809	0.36	-1.8
2,965,151	+		CCNA_02809	0.36	+4.3
2,965,154	+		CCNA_02809	0.36	-1.3
2,965,157	-		CCNA_02809	0.36	+0.2
2,965,157	-		CCNA_02809	0.36	+0.5
2,965,195	-		CCNA_02809	0.38	+2.7
2,965,210	+		CCNA_02809	0.38	+2.1
2,965,245	+		CCNA_02809	0.39	-2.8
2,965,252	+		CCNA_02809	0.39	+0.6
2,965,263	+		CCNA_02809	0.40	-0.2
2,965,306	+		CCNA_02809	0.41	-1.8
2,965,314	-		CCNA_02809	0.41	+1.7
2,965,323	+		CCNA_02809	0.42	-2.3
2,965,330	-		CCNA_02809	0.42	+0.1
2,965,338	+		CCNA_02809	0.42	+0.4
2,965,345	-		CCNA_02809	0.42	-0.3
2,965,378	-		CCNA_02809	0.43	+0.4
2,965,404	+		CCNA_02809	0.44	-2.8
2,965,404	+		CCNA_02809	0.44	+0.4
2,965,404	+		CCNA_02809	0.44	+1.5
2,965,433	-		CCNA_02809	0.45	+2.3
2,965,440	+		CCNA_02809	0.45	+0.4
2,965,449	+		CCNA_02809	0.45	-0.1
2,965,487	+		CCNA_02809	0.47	-1.7
2,965,570	-		CCNA_02809	0.49	+0.7
2,965,617	-		CCNA_02809	0.51	+1.6
2,965,637	+		CCNA_02809	0.51	+1.1
2,965,649	+		CCNA_02809	0.52	-1.1
2,965,657	-		CCNA_02809	0.52	-0.9
2,965,662	-		CCNA_02809	0.52	-0.3
2,965,730	+		CCNA_02809	0.54	-0.9
2,965,738	-		CCNA_02809	0.54	+0.7
2,965,750	+		CCNA_02809	0.55	-1.7
2,965,765	+		CCNA_02809	0.55	-1.4
2,965,800	-		CCNA_02809	0.56	+2.7
2,965,810	-		CCNA_02809	0.57	+1.7
2,965,868	+		CCNA_02809	0.58	+1.1
2,965,887	-		CCNA_02809	0.59	-1.4
2,965,889	+		CCNA_02809	0.59	+0.3
2,965,889	+		CCNA_02809	0.59	+1.2
2,965,937	+		CCNA_02809	0.60	-0.7
2,965,943	+		CCNA_02809	0.61	+0.3
2,966,011	-		CCNA_02809	0.63	-1.0
2,966,075	+		CCNA_02809	0.65	-2.9
2,966,077	+		CCNA_02809	0.65	+1.3
2,966,096	-		CCNA_02809	0.65	+1.7
2,966,116	-		CCNA_02809	0.66	-0.5
2,966,116	-		CCNA_02809	0.66	+0.7
2,966,124	-		CCNA_02809	0.66	+0.6
2,966,124	-		CCNA_02809	0.66	-0.6
2,966,163	+		CCNA_02809	0.67	-1.6
2,966,171	-		CCNA_02809	0.68	-2.4
2,966,171	-		CCNA_02809	0.68	-0.3
2,966,192	+		CCNA_02809	0.68	-2.3
2,966,192	+		CCNA_02809	0.68	-0.1
2,966,192	+		CCNA_02809	0.68	-0.9
2,966,197	+		CCNA_02809	0.68	-1.5
2,966,199	+		CCNA_02809	0.69	-0.1
2,966,200	-		CCNA_02809	0.69	+1.7
2,966,200	-		CCNA_02809	0.69	+0.2
2,966,200	-				-1.0
2,966,200	-		CCNA_02809	0.69	-3.4
2,966,218	+		CCNA_02809	0.69	-1.3
2,966,260	+		CCNA_02809	0.70	-1.8
2,966,273	-		CCNA_02809	0.71	-0.3
2,966,283	+		CCNA_02809	0.71	-3.7
2,966,293	-		CCNA_02809	0.71	+1.2
2,966,309	-		CCNA_02809	0.72	-1.6
2,966,333	+		CCNA_02809	0.73	+0.5
2,966,341	-		CCNA_02809	0.73	+0.7
2,966,379	-		CCNA_02809	0.74	-0.5
2,966,381	-		CCNA_02809	0.74	+2.7
2,966,385	+		CCNA_02809	0.74	-1.0
2,966,392	+		CCNA_02809	0.74	-1.8
2,966,393	+		CCNA_02809	0.75	-1.2
2,966,491	+		CCNA_02809	0.78	+1.4
2,966,500	+		CCNA_02809	0.78	+1.6
2,966,507	-		CCNA_02809	0.78	-0.5
2,966,507	-		CCNA_02809	0.78	-0.5
2,966,531	+		CCNA_02809	0.79	-0.1
2,966,552	-		CCNA_02809	0.79	+1.7
2,966,563	+		CCNA_02809	0.80	+0.4
2,966,563	+		CCNA_02809	0.80	-1.5
2,966,571	-		CCNA_02809	0.80	-1.0
2,966,571	-		CCNA_02809	0.80	+1.1
2,966,597	+		CCNA_02809	0.81	-0.0
2,966,597	+		CCNA_02809	0.81	+0.2
2,966,597	+		CCNA_02809	0.81	-3.3
2,966,605	-		CCNA_02809	0.81	+3.6
2,966,605	-		CCNA_02809	0.81	-0.8
2,966,606	-		CCNA_02809	0.81	-0.7
2,966,615	+		CCNA_02809	0.81	-0.1
2,966,615	+		CCNA_02809	0.81	+0.9
2,966,633	+		CCNA_02809	0.82	+1.1
2,966,633	+		CCNA_02809	0.82	+0.8
2,966,633	+		CCNA_02809	0.82	-1.9
2,966,633	+		CCNA_02809	0.82	-0.3
2,966,641	-		CCNA_02809	0.82	-2.4
2,966,646	-		CCNA_02809	0.82	-2.6
2,966,666	+		CCNA_02809	0.83	+0.5
2,966,666	+		CCNA_02809	0.83	+2.7
2,966,666	+		CCNA_02809	0.83	+2.4
2,966,666	+		CCNA_02809	0.83	+0.4
2,966,674	-		CCNA_02809	0.83	-1.2
2,966,674	-		CCNA_02809	0.83	-3.3
2,966,674	-		CCNA_02809	0.83	+0.7
2,966,674	-		CCNA_02809	0.83	+2.7
2,966,676	+		CCNA_02809	0.83	-2.0
2,966,698	-		CCNA_02809	0.84	-2.1
2,966,705	+		CCNA_02809	0.84	-2.0
2,966,718	-		CCNA_02809	0.85	-0.3
2,966,730	+		CCNA_02809	0.85	-1.1
2,966,732	+		CCNA_02809	0.85	-1.3
2,966,740	-		CCNA_02809	0.85	-1.1
2,966,750	-		CCNA_02809	0.86	-2.7
2,966,808	+		CCNA_02809	0.87	-2.5
2,966,810	+		CCNA_02809	0.87	-1.7
2,966,830	-		CCNA_02809	0.88	+0.1
2,966,870	+		CCNA_02809	0.89	-1.1
2,966,886	+		CCNA_02809	0.90	+0.6
2,966,922	-				-1.9
2,966,931	+				-0.6
2,966,939	-				+0.7
2,966,939	-				-1.1
2,966,945	-				-0.3
2,966,987	-				+0.4
2,967,017	+				+1.5
2,967,022	+				+1.9
2,967,058	-				+1.1
2,967,079	+				+0.2
2,967,079	+				+0.3
2,967,114	+				-1.8
2,967,114	+				+0.1
2,967,115	+				+0.6
2,967,122	-				+2.7
2,967,131	-				+0.1
2,967,148	+				-0.9
2,967,153	+				+0.1
2,967,178	+				+0.2
2,967,186	-				-1.1
2,967,206	-				-0.2
2,967,213	+				+0.4
2,967,243	-				-0.1
2,967,249	+				-0.7
2,967,257	-		CCNA_02810	0.11	+0.3
2,967,290	+		CCNA_02810	0.20	+1.1
2,967,320	+		CCNA_02810	0.29	+0.1
2,967,320	+		CCNA_02810	0.29	-0.3
2,967,320	+		CCNA_02810	0.29	+0.9
2,967,345	+		CCNA_02810	0.37	+2.7
2,967,346	-		CCNA_02810	0.37	-1.9
2,967,351	-		CCNA_02810	0.38	+0.7
2,967,361	+		CCNA_02810	0.41	-1.7
2,967,362	+		CCNA_02810	0.42	-2.2
2,967,363	-		CCNA_02810	0.42	-0.6
2,967,370	-		CCNA_02810	0.44	-1.1
2,967,370	-		CCNA_02810	0.44	-0.1
2,967,372	+		CCNA_02810	0.44	+1.2
2,967,372	+		CCNA_02810	0.44	-3.0
2,967,380	-		CCNA_02810	0.47	+1.7
2,967,392	-		CCNA_02810	0.50	-0.5
2,967,392	-		CCNA_02810	0.50	-0.3
2,967,398	+		CCNA_02810	0.52	-1.2
2,967,428	+		CCNA_02810	0.61	+1.1
2,967,437	-		CCNA_02810	0.63	+2.1
2,967,471	-		CCNA_02810	0.73	-1.7
2,967,475	+		CCNA_02810	0.75	+1.2
2,967,478	-		CCNA_02810	0.75	+2.4
2,967,483	-		CCNA_02810	0.77	-0.1
2,967,483	-		CCNA_02810	0.77	+0.8
2,967,502	-		CCNA_02810	0.82	-1.3
2,967,509	+		CCNA_02810	0.85	-2.2
2,967,516	-		CCNA_02810	0.87	+0.8
2,967,517	-		CCNA_02810	0.87	+3.4
2,967,519	+		CCNA_02810	0.87	+0.0
2,967,519	+		CCNA_02810	0.87	-0.9
2,967,555	+				+0.5
2,967,575	-				-0.3
2,967,620	+				-1.1
2,967,620	+				-0.4
2,967,634	+				-3.0
2,967,634	+				-0.4
2,967,643	-				-0.9
2,967,664	-				-1.6
2,967,667	+				-0.7
2,967,667	+				-1.2
2,967,667	+				-1.4
2,967,667	+				+0.1
2,967,667	+				+0.7
2,967,675	-				-0.1
2,967,678	+				+0.4
2,967,680	+				-1.0
2,967,680	+				-1.1
2,967,680	+				-0.8
2,967,680	+				-0.3
2,967,680	+				+1.4
2,967,680	+				-0.6
2,967,680	+				-0.1
2,967,680	+				+0.3
2,967,680	+				-1.4
2,967,680	+				-0.7
2,967,680	+				+3.4
2,967,680	+				-2.3
2,967,688	-				+1.9
2,967,688	-				-0.8
2,967,688	-				+1.6
2,967,688	-				-1.7
2,967,688	-				+1.1
2,967,688	-				+0.4
2,967,688	-				+0.8
2,967,688	-				+1.2
2,967,688	-				+0.6
2,967,688	-				+1.4
2,967,688	-				-1.8
2,967,688	-				-3.2
2,967,688	-				+2.1
2,967,688	-				+4.5
2,967,688	-				+0.5
2,967,688	-				-0.3
2,967,690	+				+0.1
2,967,690	+				-1.3
2,967,690	+				-1.5
2,967,698	-				+2.8
2,967,698	-				-0.1
2,967,698	-				-0.5
2,967,726	+				-0.7
2,967,753	+				+1.4
2,967,758	+				+0.1
2,967,761	-				+1.3
2,967,772	+				-1.5
2,967,780	-				-0.3
2,967,780	-				-0.1
2,967,780	-				-2.0
2,967,783	+				+2.7
2,967,791	-				+2.7
2,967,803	+				-2.4
2,967,817	+				-2.6
2,967,817	+				-2.7
2,967,829	+		CCNA_02811	0.10	+0.4
2,967,835	-		CCNA_02811	0.10	-0.6
2,967,844	-		CCNA_02811	0.11	-1.0
2,967,849	-		CCNA_02811	0.11	-2.2
2,967,851	+		CCNA_02811	0.11	+1.8
2,967,852	+		CCNA_02811	0.11	+1.7
2,967,852	+		CCNA_02811	0.11	-1.4
2,967,852	+		CCNA_02811	0.11	+1.8
2,967,853	+		CCNA_02811	0.11	+0.8
2,967,853	+		CCNA_02811	0.11	-0.1
2,967,854	-		CCNA_02811	0.11	+0.2
2,967,889	-		CCNA_02811	0.13	-0.8
2,967,891	+		CCNA_02811	0.13	-1.2
2,967,926	-		CCNA_02811	0.15	-0.9
2,967,937	-		CCNA_02811	0.15	+0.4
2,967,960	+		CCNA_02811	0.17	-0.1
2,967,965	+		CCNA_02811	0.17	-1.0
2,968,075	-		CCNA_02811	0.22	-0.5
2,968,075	-		CCNA_02811	0.22	+1.1
2,968,095	+		CCNA_02811	0.23	-2.8
2,968,103	+		CCNA_02811	0.24	-1.5
2,968,105	+		CCNA_02811	0.24	-0.8
2,968,121	-		CCNA_02811	0.24	-0.3
2,968,124	-		CCNA_02811	0.25	-0.7
2,968,150	+		CCNA_02811	0.26	+2.3
2,968,150	+		CCNA_02811	0.26	-0.5
2,968,155	+		CCNA_02811	0.26	-3.1
2,968,163	-		CCNA_02811	0.26	+1.9
2,968,165	+		CCNA_02811	0.27	+1.0
2,968,194	-		CCNA_02811	0.28	-1.6
2,968,206	+		CCNA_02811	0.29	+1.1
2,968,206	+		CCNA_02811	0.29	-0.8
2,968,206	+		CCNA_02811	0.29	-1.6
2,968,206	+		CCNA_02811	0.29	+0.1
2,968,206	+		CCNA_02811	0.29	-2.1
2,968,206	+		CCNA_02811	0.29	-2.2
2,968,206	+		CCNA_02811	0.29	+0.5
2,968,211	+		CCNA_02811	0.29	-2.9
2,968,211	+		CCNA_02811	0.29	-0.9
2,968,214	-		CCNA_02811	0.29	-0.1
2,968,214	-		CCNA_02811	0.29	-0.3
2,968,214	-		CCNA_02811	0.29	-1.1
2,968,214	-		CCNA_02811	0.29	+1.7