Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02670

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
2,821,712	-		CCNA_02669	0.31	+2.6
2,821,744	+		CCNA_02669	0.34	+1.6
2,821,745	+		CCNA_02669	0.34	+0.4
2,821,760	+		CCNA_02669	0.35	-2.6
2,821,771	+		CCNA_02669	0.36	-1.3
2,821,779	-		CCNA_02669	0.37	+0.3
2,821,789	-		CCNA_02669	0.37	-2.4
2,821,802	+		CCNA_02669	0.38	+0.5
2,821,913	+		CCNA_02669	0.47	+0.3
2,821,913	+				+0.0
2,821,959	-		CCNA_02669	0.51	+0.5
2,821,967	+		CCNA_02669	0.51	+2.6
2,821,967	+		CCNA_02669	0.51	+1.6
2,821,973	+		CCNA_02669	0.52	-1.7
2,822,001	+		CCNA_02669	0.54	-0.5
2,822,001	+		CCNA_02669	0.54	-1.0
2,822,002	+		CCNA_02669	0.54	-0.1
2,822,009	-		CCNA_02669	0.54	-3.9
2,822,009	-		CCNA_02669	0.54	-0.2
2,822,009	-		CCNA_02669	0.54	-1.9
2,822,009	-		CCNA_02669	0.54	-0.7
2,822,063	-		CCNA_02669	0.59	-0.9
2,822,092	+		CCNA_02669	0.61	+4.9
2,822,092	+		CCNA_02669	0.61	-1.9
2,822,092	+				+2.6
2,822,100	-		CCNA_02669	0.62	-0.3
2,822,100	-		CCNA_02669	0.62	-2.8
2,822,100	-		CCNA_02669	0.62	+0.6
2,822,100	-		CCNA_02669	0.62	-2.3
2,822,120	-		CCNA_02669	0.63	+0.6
2,822,134	+		CCNA_02669	0.64	-1.2
2,822,152	-		CCNA_02669	0.66	-0.7
2,822,152	-		CCNA_02669	0.66	+3.9
2,822,157	+		CCNA_02669	0.66	-0.4
2,822,165	-		CCNA_02669	0.67	-2.7
2,822,213	-		CCNA_02669	0.70	-1.7
2,822,215	-		CCNA_02669	0.71	-1.8
2,822,247	-		CCNA_02669	0.73	-2.2
2,822,256	+		CCNA_02669	0.74	-0.7
2,822,258	-		CCNA_02669	0.74	-1.3
2,822,288	-		CCNA_02669	0.76	-1.4
2,822,300	+		CCNA_02669	0.77	-0.6
2,822,308	-		CCNA_02669	0.78	+0.2
2,822,308	-		CCNA_02669	0.78	-1.2
2,822,316	+		CCNA_02669	0.78	+0.7
2,822,316	+		CCNA_02669	0.78	+0.3
2,822,316	+		CCNA_02669	0.78	+0.5
2,822,374	+		CCNA_02669	0.83	+0.8
2,822,374	+		CCNA_02669	0.83	+2.4
2,822,383	-		CCNA_02669	0.84	+3.3
2,822,478	-				-3.4
2,822,491	+				-3.4
2,822,517	-				+0.8
2,822,517	-				-1.9
2,822,517	-				-1.6
2,822,517	-				+0.8
2,822,561	-				+1.8
2,822,575	+				+0.0
2,822,575	+				+2.6
2,822,689	+				+1.0
2,822,711	-				-0.6
2,822,737	+				+1.0
2,822,764	-				-0.7
2,822,764	-				+1.8
2,822,782	+				+0.9
2,822,843	+		CCNA_02670	0.13	+2.8
2,822,848	+		CCNA_02670	0.13	-1.9
2,822,848	+		CCNA_02670	0.13	+1.4
2,822,848	+		CCNA_02670	0.13	+1.6
2,822,848	+		CCNA_02670	0.13	-1.1
2,822,848	+		CCNA_02670	0.13	+3.9
2,822,848	+		CCNA_02670	0.13	+0.6
2,822,848	+		CCNA_02670	0.13	+1.6
2,822,848	+		CCNA_02670	0.13	+2.1
2,822,848	+		CCNA_02670	0.13	-1.3
2,822,856	-		CCNA_02670	0.14	-1.4
2,822,856	-		CCNA_02670	0.14	+1.0
2,822,856	-		CCNA_02670	0.14	-2.2
2,822,856	-		CCNA_02670	0.14	+0.4
2,822,856	-		CCNA_02670	0.14	-0.6
2,822,986	+		CCNA_02670	0.22	-0.2
2,823,005	+		CCNA_02670	0.23	-1.3
2,823,005	+		CCNA_02670	0.23	-1.8
2,823,005	+		CCNA_02670	0.23	-3.4
2,823,013	-		CCNA_02670	0.24	-2.4
2,823,013	-		CCNA_02670	0.24	-0.7
2,823,013	-		CCNA_02670	0.24	-0.2
2,823,013	-		CCNA_02670	0.24	-1.0
2,823,015	-		CCNA_02670	0.24	-1.4
2,823,023	-		CCNA_02670	0.24	+1.3
2,823,025	-		CCNA_02670	0.24	-1.0
2,823,025	-		CCNA_02670	0.24	+0.3
2,823,027	+		CCNA_02670	0.25	-1.6
2,823,027	+		CCNA_02670	0.25	+0.6
2,823,035	-		CCNA_02670	0.25	-0.4
2,823,036	-		CCNA_02670	0.25	-1.6
2,823,055	-		CCNA_02670	0.26	-0.7
2,823,065	+		CCNA_02670	0.27	-1.9
2,823,083	-		CCNA_02670	0.28	-0.2
2,823,086	+		CCNA_02670	0.28	-1.3
2,823,122	+		CCNA_02670	0.30	+1.0
2,823,123	+		CCNA_02670	0.31	-2.4
2,823,131	-		CCNA_02670	0.31	-0.3
2,823,138	+		CCNA_02670	0.31	+0.6
2,823,141	-		CCNA_02670	0.32	-1.4
2,823,146	-		CCNA_02670	0.32	+2.8
2,823,163	-		CCNA_02670	0.33	+2.6
2,823,163	-		CCNA_02670	0.33	-1.9
2,823,226	+		CCNA_02670	0.37	-1.6
2,823,234	-		CCNA_02670	0.37	+0.3
2,823,275	-		CCNA_02670	0.40	+0.3
2,823,276	-		CCNA_02670	0.40	-0.2
2,823,282	-		CCNA_02670	0.40	-0.8
2,823,313	+		CCNA_02670	0.42	+0.3
2,823,328	+		CCNA_02670	0.43	-1.9
2,823,343	-		CCNA_02670	0.44	+0.0
2,823,361	-		CCNA_02670	0.45	-3.2
2,823,379	-		CCNA_02670	0.46	-1.3
2,823,403	+		CCNA_02670	0.48	+2.0
2,823,467	+		CCNA_02670	0.52	-1.2
2,823,475	-		CCNA_02670	0.52	-0.9
2,823,490	-		CCNA_02670	0.53	-3.0
2,823,525	+		CCNA_02670	0.56	-1.3
2,823,525	+		CCNA_02670	0.56	+2.6
2,823,526	+		CCNA_02670	0.56	-2.4
2,823,530	+		CCNA_02670	0.56	-0.3
2,823,553	-		CCNA_02670	0.57	+1.2
2,823,560	+		CCNA_02670	0.58	+1.6
2,823,568	-		CCNA_02670	0.58	+0.8
2,823,568	-		CCNA_02670	0.58	+0.8
2,823,568	-		CCNA_02670	0.58	-1.1
2,823,593	+		CCNA_02670	0.60	-0.4
2,823,593	+		CCNA_02670	0.60	+0.5
2,823,601	-		CCNA_02670	0.60	-1.1
2,823,601	-		CCNA_02670	0.60	-0.2
2,823,601	-		CCNA_02670	0.60	-1.6
2,823,637	-		CCNA_02670	0.62	-2.2
2,823,643	+		CCNA_02670	0.63	-1.9
2,823,646	-		CCNA_02670	0.63	+1.2
2,823,651	-		CCNA_02670	0.63	-1.0
2,823,677	+		CCNA_02670	0.65	-3.6
2,823,680	-		CCNA_02670	0.65	+0.0
2,823,683	+		CCNA_02670	0.65	-1.1
2,823,685	-		CCNA_02670	0.65	-1.6
2,823,699	-		CCNA_02670	0.66	-0.1
2,823,708	+		CCNA_02670	0.67	-1.2
2,823,752	+		CCNA_02670	0.70	-2.4
2,823,752	+		CCNA_02670	0.70	+2.6
2,823,764	-		CCNA_02670	0.70	+2.6
2,823,798	-		CCNA_02670	0.73	-1.4
2,823,871	+		CCNA_02670	0.77	-1.9
2,823,877	+		CCNA_02670	0.77	-0.9
2,823,883	+		CCNA_02670	0.78	+1.6
2,823,883	+		CCNA_02670	0.78	-0.7
2,823,885	-		CCNA_02670	0.78	+0.0
2,823,885	-		CCNA_02670	0.78	+0.0
2,823,891	-		CCNA_02670	0.78	+0.1
2,823,891	-		CCNA_02670	0.78	-0.8
2,823,900	+		CCNA_02670	0.79	-2.0
2,823,908	-		CCNA_02670	0.79	+0.2
2,823,908	-		CCNA_02670	0.79	-2.5
2,823,964	+		CCNA_02670	0.83	-2.4
2,823,964	+		CCNA_02670	0.83	-1.6
2,823,965	+		CCNA_02670	0.83	+0.3
2,823,972	-		CCNA_02670	0.83	+0.0
2,823,972	-		CCNA_02670	0.83	-0.2
2,823,983	-		CCNA_02670	0.84	+1.7
2,823,983	-		CCNA_02670	0.84	+0.6
2,823,983	-		CCNA_02670	0.84	+0.9
2,823,988	-		CCNA_02670	0.84	+1.2
2,823,988	-		CCNA_02670	0.84	+2.4
2,824,015	-		CCNA_02670	0.86	+0.4
2,824,017	+		CCNA_02670	0.86	+0.3
2,824,017	+		CCNA_02670	0.86	+2.0
2,824,017	+		CCNA_02670	0.86	-0.7
2,824,017	+		CCNA_02670	0.86	+0.6
2,824,025	-		CCNA_02670	0.87	+0.6
2,824,025	-		CCNA_02670	0.87	-1.7
2,824,025	-		CCNA_02670	0.87	-3.0
2,824,065	+		CCNA_02670	0.89	-0.9
2,824,071	+		CCNA_02670	0.89	+0.0
2,824,072	-		CCNA_02670	0.90	-1.0
2,824,073	-		CCNA_02670	0.90	+0.4
2,824,079	-				-1.5
2,824,112	+				+0.3
2,824,119	-				+0.6
2,824,119	-				-0.5
2,824,119	-				+2.2
2,824,120	-				+0.0
2,824,134	+				-1.5
2,824,134	-				+1.0
2,824,149	+				-1.4
2,824,149	+				-0.4
2,824,149	+				-1.8
2,824,168	+				-1.6
2,824,176	-				+1.0
2,824,176	-				+0.4
2,824,200	-				+0.8
2,824,219	+				-1.8
2,824,275	-		CCNA_03972	0.69	+1.2
2,824,277	+		CCNA_03972	0.71	-1.0
2,824,279	+		CCNA_03972	0.73	-0.2
2,824,300	-				+1.6
2,824,365	-				+1.8
2,824,381	-				-0.2
2,824,393	+		CCNA_02671	0.11	-0.9
2,824,393	+		CCNA_02671	0.11	+0.1
2,824,500	-		CCNA_02671	0.77	+1.9
2,824,500	-		CCNA_02671	0.77	+0.6
2,824,500	-		CCNA_02671	0.77	+1.8
2,824,507	-		CCNA_02671	0.81	-1.3
2,824,565	+				+1.0
2,824,565	+				-0.9
2,824,587	-				+0.0
2,824,592	-				-0.4
2,824,619	+				-0.6
2,824,628	-				-1.3
2,824,634	+				-0.2
2,824,639	+				-0.7
2,824,654	+				-1.0
2,824,662	-				+0.8
2,824,662	-				+0.1
2,824,690	+				+2.6
2,824,698	-				+0.0
2,824,703	-				-0.6
2,824,730	+		CCNA_02672	0.16	-1.1
2,824,730	+		CCNA_02672	0.16	+1.0
2,824,738	-		CCNA_02672	0.17	-2.2
2,824,738	-		CCNA_02672	0.17	+0.1
2,824,738	-		CCNA_02672	0.17	+0.3
2,824,749	-		CCNA_02672	0.20	-0.5
2,824,749	-		CCNA_02672	0.20	+0.7
2,824,749	-		CCNA_02672	0.20	+1.3
2,824,767	-		CCNA_02672	0.24	+0.1
2,824,813	-		CCNA_02672	0.34	+0.3
2,824,825	-		CCNA_02672	0.36	-0.4
2,824,870	-		CCNA_02672	0.46	-0.6
2,824,884	-		CCNA_02672	0.49	+1.1
2,824,891	-		CCNA_02672	0.50	-2.1
2,824,919	+		CCNA_02672	0.56	+0.0
2,824,919	+		CCNA_02672	0.56	-1.0
2,824,919	+		CCNA_02672	0.56	-0.9
2,824,927	-		CCNA_02672	0.58	+0.6
2,824,927	-		CCNA_02672	0.58	+0.1
2,824,927	-		CCNA_02672	0.58	-3.2
2,824,927	-		CCNA_02672	0.58	+2.4
2,824,927	-		CCNA_02672	0.58	-0.4
2,824,946	+		CCNA_02672	0.62	-1.2
2,824,983	+		CCNA_02672	0.70	-1.9
2,824,983	+		CCNA_02672	0.70	+0.3
2,825,001	+		CCNA_02672	0.74	+0.5
2,825,002	-		CCNA_02672	0.74	+0.4
2,825,006	+		CCNA_02672	0.75	+2.6
2,825,011	+		CCNA_02672	0.76	+0.0
2,825,011	+		CCNA_02672	0.76	+0.4
2,825,011	+		CCNA_02672	0.76	-1.3
2,825,011	+		CCNA_02672	0.76	+0.0
2,825,011	+		CCNA_02672	0.76	+0.0
2,825,011	+		CCNA_02672	0.76	+0.6
2,825,019	-		CCNA_02672	0.78	-2.5
2,825,019	-		CCNA_02672	0.78	+0.6
2,825,019	-		CCNA_02672	0.78	+0.6
2,825,019	-		CCNA_02672	0.78	+0.1
2,825,019	-		CCNA_02672	0.78	+0.0
2,825,019	-		CCNA_02672	0.78	+0.4
2,825,019	-		CCNA_02672	0.78	+1.6
2,825,019	-		CCNA_02672	0.78	-0.7
2,825,019	-		CCNA_02672	0.78	-1.6
2,825,019	-		CCNA_02672	0.78	+0.7
2,825,019	-		CCNA_02672	0.78	-0.1
2,825,019	-		CCNA_02672	0.78	+1.7
2,825,045	-		CCNA_02672	0.83	-0.7
2,825,046	-		CCNA_02672	0.84	-0.8
2,825,055	-		CCNA_02672	0.86	-3.3
2,825,144	-				-0.7
2,825,171	+				-0.1
2,825,179	-				+0.0
2,825,192	+				-2.1
2,825,197	+				-2.2
2,825,200	-				-1.8
2,825,204	-				-0.2
2,825,225	+				+0.4