Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02538

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
2,686,024	+		CCNA_02537	0.61	+0.2
2,686,024	+		CCNA_02537	0.61	-1.5
2,686,029	+		CCNA_02537	0.62	-0.0
2,686,029	+		CCNA_02537	0.62	+0.2
2,686,032	-		CCNA_02537	0.62	-3.1
2,686,052	+		CCNA_02537	0.63	-0.7
2,686,054	-		CCNA_02537	0.63	+3.6
2,686,072	+		CCNA_02537	0.63	-1.6
2,686,072	+		CCNA_02537	0.63	+3.9
2,686,072	+		CCNA_02537	0.63	+0.8
2,686,072	+		CCNA_02537	0.63	+1.1
2,686,080	-		CCNA_02537	0.64	-0.6
2,686,080	-		CCNA_02537	0.64	-2.2
2,686,087	+		CCNA_02537	0.64	-1.0
2,686,090	-		CCNA_02537	0.64	-0.0
2,686,114	+		CCNA_02537	0.65	-0.9
2,686,114	+		CCNA_02537	0.65	+0.6
2,686,164	+		CCNA_02537	0.67	+0.0
2,686,171	+		CCNA_02537	0.68	-1.1
2,686,188	+		CCNA_02537	0.69	+1.6
2,686,188	+		CCNA_02537	0.69	-1.7
2,686,196	-		CCNA_02537	0.69	+0.2
2,686,200	+		CCNA_02537	0.69	-1.7
2,686,216	+		CCNA_02537	0.70	-1.7
2,686,252	-		CCNA_02537	0.71	-1.4
2,686,263	+		CCNA_02537	0.72	+1.0
2,686,267	-		CCNA_02537	0.72	-2.3
2,686,271	-		CCNA_02537	0.72	-0.3
2,686,275	+		CCNA_02537	0.72	-2.2
2,686,302	-		CCNA_02537	0.74	-2.4
2,686,303	+		CCNA_02537	0.74	-1.1
2,686,316	-		CCNA_02537	0.74	+0.6
2,686,327	+		CCNA_02537	0.75	+0.4
2,686,327	+		CCNA_02537	0.75	-0.7
2,686,347	+		CCNA_02537	0.76	-1.4
2,686,383	-		CCNA_02537	0.77	-0.2
2,686,411	-		CCNA_02537	0.78	-1.9
2,686,422	+		CCNA_02537	0.79	+0.2
2,686,422	+		CCNA_02537	0.79	-2.4
2,686,430	-		CCNA_02537	0.79	+1.0
2,686,434	+		CCNA_02537	0.79	+1.8
2,686,434	+		CCNA_02537	0.79	-1.3
2,686,442	-		CCNA_02537	0.80	-0.4
2,686,442	-		CCNA_02537	0.80	+0.3
2,686,452	+		CCNA_02537	0.80	+0.2
2,686,452	+		CCNA_02537	0.80	-0.2
2,686,547	+		CCNA_02537	0.84	+0.5
2,686,548	-		CCNA_02537	0.84	-0.2
2,686,577	+		CCNA_02537	0.86	-0.7
2,686,585	-		CCNA_02537	0.86	+0.3
2,686,607	-		CCNA_02537	0.87	-0.2
2,686,631	+		CCNA_02537	0.88	-0.1
2,686,631	+		CCNA_02537	0.88	-0.9
2,686,631	+		CCNA_02537	0.88	+1.2
2,686,631	+		CCNA_02537	0.88	-2.5
2,686,631	+		CCNA_02537	0.88	-0.2
2,686,636	+		CCNA_02537	0.88	-1.0
2,686,639	-		CCNA_02537	0.88	+1.0
2,686,639	-		CCNA_02537	0.88	+2.6
2,686,642	+		CCNA_02537	0.88	-0.1
2,686,650	-		CCNA_02537	0.89	+0.5
2,686,731	+				+0.1
2,686,738	-				-1.0
2,686,738	-				-0.4
2,686,740	+				-0.8
2,686,748	-				-1.5
2,686,823	-				-1.5
2,686,872	+				+0.5
2,686,872	+				+2.4
2,686,872	+				+0.5
2,686,872	+				+1.2
2,686,872	+				+1.3
2,686,872	+				+1.1
2,686,872	+				+0.8
2,686,872	+				+0.6
2,686,872	+				-0.3
2,686,872	+				+0.8
2,686,872	+				+1.2
2,686,872	+				+0.8
2,686,872	+				+0.3
2,686,872	+				-0.2
2,686,872	+				+1.4
2,686,880	-				-1.0
2,686,880	-				-0.3
2,686,880	-				-0.8
2,686,880	-				-2.6
2,686,880	-				+3.3
2,686,880	-				-1.8
2,686,880	-				+1.0
2,686,880	-				-0.4
2,686,959	-				+0.4
2,686,960	+				-1.2
2,686,973	-				-0.6
2,686,973	-				-0.4
2,687,041	-				+1.0
2,687,109	+				-1.3
2,687,118	-				+0.3
2,687,132	+		CCNA_02538	0.11	+2.4
2,687,201	+		CCNA_02538	0.17	-2.8
2,687,209	-		CCNA_02538	0.18	-0.3
2,687,215	-		CCNA_02538	0.19	+0.5
2,687,240	-		CCNA_02538	0.21	-0.2
2,687,258	+		CCNA_02538	0.23	-0.2
2,687,279	+		CCNA_02538	0.25	+1.3
2,687,287	-		CCNA_02538	0.26	+0.4
2,687,287	-		CCNA_02538	0.26	-1.4
2,687,295	-		CCNA_02538	0.27	+2.1
2,687,303	+		CCNA_02538	0.27	-1.7
2,687,308	-		CCNA_02538	0.28	+1.6
2,687,311	-		CCNA_02538	0.28	-0.3
2,687,323	-		CCNA_02538	0.29	-0.1
2,687,327	+		CCNA_02538	0.30	+0.5
2,687,337	+		CCNA_02538	0.31	-2.3
2,687,368	-		CCNA_02538	0.34	-2.3
2,687,394	-		CCNA_02538	0.36	-0.6
2,687,399	-		CCNA_02538	0.37	+2.2
2,687,419	-		CCNA_02538	0.39	-1.2
2,687,518	+		CCNA_02538	0.48	+1.2
2,687,523	+		CCNA_02538	0.49	-0.3
2,687,526	-		CCNA_02538	0.49	+1.2
2,687,527	-		CCNA_02538	0.49	+1.8
2,687,554	-		CCNA_02538	0.52	+0.1
2,687,556	+		CCNA_02538	0.52	+1.2
2,687,576	+		CCNA_02538	0.54	+1.3
2,687,579	-		CCNA_02538	0.54	+0.7
2,687,582	-		CCNA_02538	0.55	+0.8
2,687,584	-		CCNA_02538	0.55	+0.6
2,687,584	-		CCNA_02538	0.55	+1.5
2,687,584	-		CCNA_02538	0.55	+0.7
2,687,608	+		CCNA_02538	0.57	-0.7
2,687,623	-		CCNA_02538	0.59	+1.9
2,687,657	+		CCNA_02538	0.62	+1.3
2,687,657	+		CCNA_02538	0.62	-1.0
2,687,669	+		CCNA_02538	0.63	-2.4
2,687,763	+		CCNA_02538	0.72	-1.7
2,687,771	-		CCNA_02538	0.73	-1.2
2,687,786	-		CCNA_02538	0.75	+0.6
2,687,788	+		CCNA_02538	0.75	-0.0
2,687,788	+		CCNA_02538	0.75	+0.1
2,687,788	+		CCNA_02538	0.75	-0.3
2,687,793	+		CCNA_02538	0.75	+0.2
2,687,793	+		CCNA_02538	0.75	-0.1
2,687,793	+		CCNA_02538	0.75	+1.1
2,687,796	-		CCNA_02538	0.76	-1.7
2,687,796	-		CCNA_02538	0.76	-1.9
2,687,796	-		CCNA_02538	0.76	-0.2
2,687,796	-		CCNA_02538	0.76	-1.7
2,687,796	-		CCNA_02538	0.76	-0.4
2,687,798	+		CCNA_02538	0.76	+0.6
2,687,801	-		CCNA_02538	0.76	-1.0
2,687,801	-		CCNA_02538	0.76	+1.7
2,687,801	-		CCNA_02538	0.76	-2.6
2,687,821	-		CCNA_02538	0.78	-1.7
2,687,903	+		CCNA_02538	0.86	-2.5
2,687,911	-		CCNA_02538	0.87	-1.9
2,687,934	-		CCNA_02538	0.89	-0.6
2,687,938	+		CCNA_02538	0.89	+0.0
2,687,999	+				-0.1
2,688,009	+				+0.1
2,688,009	+				+2.0
2,688,009	+				-0.6
2,688,017	-				-1.4
2,688,023	-				-1.9
2,688,075	+				+1.4
2,688,083	-				+0.3
2,688,143	+				+0.3
2,688,151	-				+1.6
2,688,196	-				+4.2
2,688,233	+				+0.8
2,688,241	-				-0.6
2,688,241	-				-0.6
2,688,241	-				-1.3
2,688,251	+		CCNA_02539	0.10	-0.3
2,688,251	+		CCNA_02539	0.10	+1.2
2,688,257	+		CCNA_02539	0.11	-0.3
2,688,258	+		CCNA_02539	0.11	+2.6
2,688,258	+		CCNA_02539	0.11	+0.6
2,688,263	+		CCNA_02539	0.11	-0.9
2,688,266	-		CCNA_02539	0.12	-0.3
2,688,266	-		CCNA_02539	0.12	-1.6
2,688,270	+		CCNA_02539	0.12	-1.2
2,688,278	-		CCNA_02539	0.13	-1.5
2,688,346	+		CCNA_02539	0.19	-1.0
2,688,354	-		CCNA_02539	0.19	-1.7
2,688,387	+		CCNA_02539	0.22	-0.8
2,688,387	+		CCNA_02539	0.22	-1.3
2,688,395	-		CCNA_02539	0.23	+0.2
2,688,395	-		CCNA_02539	0.23	-2.6
2,688,395	-		CCNA_02539	0.23	-1.2
2,688,395	-		CCNA_02539	0.23	-0.2
2,688,428	+		CCNA_02539	0.26	-1.4
2,688,435	-		CCNA_02539	0.26	-0.8
2,688,436	-		CCNA_02539	0.27	+0.9
2,688,454	+		CCNA_02539	0.28	-1.1
2,688,459	+		CCNA_02539	0.29	-0.2
2,688,459	+		CCNA_02539	0.29	-0.9
2,688,459	+		CCNA_02539	0.29	+0.8
2,688,459	+		CCNA_02539	0.29	-0.4
2,688,459	+		CCNA_02539	0.29	-0.3
2,688,467	-		CCNA_02539	0.29	+2.6
2,688,467	-		CCNA_02539	0.29	-0.2
2,688,467	-		CCNA_02539	0.29	+1.5
2,688,467	-		CCNA_02539	0.29	-1.7
2,688,467	-				-2.1
2,688,472	-		CCNA_02539	0.30	-1.2
2,688,521	+		CCNA_02539	0.34	-0.8
2,688,565	-		CCNA_02539	0.38	-1.6
2,688,572	-		CCNA_02539	0.38	-2.4
2,688,606	+		CCNA_02539	0.41	-1.0
2,688,656	+		CCNA_02539	0.46	-2.8
2,688,667	+		CCNA_02539	0.47	+0.2
2,688,669	+		CCNA_02539	0.47	+1.2
2,688,674	+		CCNA_02539	0.47	-1.3
2,688,677	-		CCNA_02539	0.48	-2.5
2,688,682	-		CCNA_02539	0.48	-3.0
2,688,682	-		CCNA_02539	0.48	+3.0
2,688,682	-		CCNA_02539	0.48	+1.5
2,688,682	-		CCNA_02539	0.48	-1.2
2,688,682	-		CCNA_02539	0.48	-1.7
2,688,682	-		CCNA_02539	0.48	-1.2
2,688,684	+		CCNA_02539	0.48	+0.6
2,688,728	+		CCNA_02539	0.52	-1.8
2,688,728	+		CCNA_02539	0.52	+0.7
2,688,822	+		CCNA_02539	0.60	-0.4
2,688,827	+		CCNA_02539	0.61	+0.6
2,688,835	-		CCNA_02539	0.61	+0.9
2,688,855	+		CCNA_02539	0.63	+1.7
2,688,890	+		CCNA_02539	0.66	-0.1
2,688,911	+		CCNA_02539	0.68	-0.6
2,688,924	+		CCNA_02539	0.69	+1.2
2,688,941	-		CCNA_02539	0.71	-2.6
2,688,941	-		CCNA_02539	0.71	+0.6
2,688,954	+		CCNA_02539	0.72	-0.3
2,688,968	-		CCNA_02539	0.73	-2.2
2,689,014	+		CCNA_02539	0.77	+1.6
2,689,014	+		CCNA_02539	0.77	-0.0
2,689,021	+		CCNA_02539	0.78	-0.8
2,689,021	+		CCNA_02539	0.78	-2.9
2,689,029	-		CCNA_02539	0.78	+4.2
2,689,029	-		CCNA_02539	0.78	+1.4
2,689,029	-		CCNA_02539	0.78	+1.5