Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02410

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
2,552,962	-		CCNA_02409	0.53	+0.0
2,553,045	+		CCNA_02409	0.57	+1.4
2,553,072	+		CCNA_02409	0.59	+1.0
2,553,072	+		CCNA_02409	0.59	+1.5
2,553,080	-		CCNA_02409	0.59	-1.4
2,553,144	+		CCNA_02409	0.63	-0.8
2,553,193	+		CCNA_02409	0.65	-0.2
2,553,221	+		CCNA_02409	0.67	+0.6
2,553,221	+		CCNA_02409	0.67	-1.8
2,553,237	+		CCNA_02409	0.68	+1.8
2,553,237	+		CCNA_02409	0.68	+0.5
2,553,237	+		CCNA_02409	0.68	+0.6
2,553,245	-		CCNA_02409	0.68	-1.3
2,553,245	-		CCNA_02409	0.68	+1.1
2,553,245	-		CCNA_02409	0.68	-0.9
2,553,245	-		CCNA_02409	0.68	-1.5
2,553,303	-		CCNA_02409	0.72	-0.4
2,553,327	+		CCNA_02409	0.73	+0.9
2,553,339	+		CCNA_02409	0.74	-0.3
2,553,376	+		CCNA_02409	0.76	+0.8
2,553,384	-		CCNA_02409	0.76	-1.2
2,553,387	+		CCNA_02409	0.76	+1.2
2,553,398	-		CCNA_02409	0.77	-2.2
2,553,399	+		CCNA_02409	0.77	+0.3
2,553,424	+		CCNA_02409	0.78	+0.7
2,553,453	+		CCNA_02409	0.80	+0.5
2,553,458	+		CCNA_02409	0.80	+2.6
2,553,458	+		CCNA_02409	0.80	-0.2
2,553,458	+		CCNA_02409	0.80	-0.0
2,553,463	+		CCNA_02409	0.81	+0.4
2,553,464	-		CCNA_02409	0.81	-0.6
2,553,466	-		CCNA_02409	0.81	-1.0
2,553,466	-		CCNA_02409	0.81	-2.3
2,553,466	-		CCNA_02409	0.81	-2.0
2,553,466	-		CCNA_02409	0.81	-1.4
2,553,473	+		CCNA_02409	0.81	+0.0
2,553,481	-		CCNA_02409	0.82	-1.2
2,553,481	-		CCNA_02409	0.82	-0.7
2,553,514	+		CCNA_02409	0.83	-0.3
2,553,543	-		CCNA_02409	0.85	-0.7
2,553,543	-		CCNA_02409	0.85	-0.9
2,553,549	+		CCNA_02409	0.85	+0.1
2,553,567	-		CCNA_02409	0.86	+1.0
2,553,576	-		CCNA_02409	0.87	-1.7
2,553,624	-		CCNA_02409	0.90	+0.6
2,553,629	+		CCNA_02409	0.90	+0.2
2,553,632	-				+0.6
2,553,639	+				-0.7
2,553,736	-				-0.7
2,553,743	+				+0.9
2,553,755	+				-0.1
2,553,755	+				+0.4
2,553,774	+				+2.0
2,553,888	+				-2.8
2,553,888	+				+2.2
2,553,888	+				+0.5
2,553,888	+				+1.2
2,553,888	+				+2.5
2,553,888	+				-0.9
2,553,888	+				-0.3
2,553,896	-				+1.9
2,553,924	+				+1.6
2,553,959	+				-0.6
2,554,054	-				+0.8
2,554,061	+				-0.1
2,554,088	+		CCNA_02410	0.11	+1.6
2,554,102	+		CCNA_02410	0.12	+0.0
2,554,110	-		CCNA_02410	0.13	-0.6
2,554,110	-		CCNA_02410	0.13	+0.8
2,554,115	+		CCNA_02410	0.13	-1.9
2,554,153	-				+0.3
2,554,169	-		CCNA_02410	0.18	+0.2
2,554,169	-		CCNA_02410	0.18	+1.0
2,554,194	+		CCNA_02410	0.20	-1.4
2,554,204	-		CCNA_02410	0.21	-1.8
2,554,227	+		CCNA_02410	0.23	-1.7
2,554,234	-		CCNA_02410	0.23	+0.9
2,554,251	+		CCNA_02410	0.25	+0.3
2,554,252	-		CCNA_02410	0.25	+2.6
2,554,256	+		CCNA_02410	0.25	+0.1
2,554,259	-		CCNA_02410	0.25	-1.7
2,554,259	-		CCNA_02410	0.25	+0.0
2,554,271	+		CCNA_02410	0.26	-0.3
2,554,279	-		CCNA_02410	0.27	-1.2
2,554,291	-		CCNA_02410	0.28	+0.6
2,554,316	-		CCNA_02410	0.30	+2.6
2,554,327	-		CCNA_02410	0.31	+1.6
2,554,332	+		CCNA_02410	0.31	-0.8
2,554,340	-		CCNA_02410	0.32	-1.5
2,554,349	-		CCNA_02410	0.33	-0.2
2,554,424	+		CCNA_02410	0.39	-1.9
2,554,439	+		CCNA_02410	0.40	-1.4
2,554,449	+		CCNA_02410	0.41	-2.2
2,554,449	+		CCNA_02410	0.41	-0.8
2,554,449	+		CCNA_02410	0.41	-1.8
2,554,468	+		CCNA_02410	0.43	-1.3
2,554,503	+		CCNA_02410	0.46	-0.3
2,554,510	+		CCNA_02410	0.46	-1.0
2,554,532	-		CCNA_02410	0.48	+1.6
2,554,538	+		CCNA_02410	0.49	+3.8
2,554,546	-		CCNA_02410	0.49	-0.8
2,554,546	-		CCNA_02410	0.49	-2.5
2,554,546	-		CCNA_02410	0.49	-0.8
2,554,554	-		CCNA_02410	0.50	+0.3
2,554,644	+		CCNA_02410	0.58	-2.0
2,554,644	+		CCNA_02410	0.58	-0.6
2,554,693	+				-1.7
2,554,709	+		CCNA_02410	0.63	+0.1
2,554,717	-		CCNA_02410	0.64	+0.0
2,554,750	+		CCNA_02410	0.67	+0.0
2,554,750	+		CCNA_02410	0.67	-0.2
2,554,750	+		CCNA_02410	0.67	+0.0
2,554,751	+		CCNA_02410	0.67	-1.7
2,554,758	-		CCNA_02410	0.67	-3.2
2,554,758	-		CCNA_02410	0.67	+0.6
2,554,887	+		CCNA_02410	0.78	-2.2
2,554,895	-		CCNA_02410	0.79	-1.3
2,554,895	-		CCNA_02410	0.79	+0.0
2,554,902	+		CCNA_02410	0.79	-0.9
2,554,906	+		CCNA_02410	0.80	+2.6
2,554,914	-		CCNA_02410	0.80	-0.9
2,554,940	+		CCNA_02410	0.83	-0.3
2,555,018	+		CCNA_02410	0.89	+3.6
2,555,018	+		CCNA_02410	0.89	-2.3
2,555,050	-				+0.2
2,555,053	+				-1.5
2,555,092	-				+1.6
2,555,121	+				-1.4
2,555,129	-				+3.7
2,555,129	-				+0.4
2,555,140	-				-0.7
2,555,140	-				+1.4
2,555,189	-				+3.0
2,555,201	-				+1.6
2,555,215	+				-0.8
2,555,222	-		CCNA_02411	0.10	-2.4
2,555,252	+		CCNA_02411	0.14	+1.6
2,555,257	-		CCNA_02411	0.14	+0.4
2,555,277	+		CCNA_02411	0.16	-2.1
2,555,285	-		CCNA_02411	0.17	+1.3
2,555,286	-		CCNA_02411	0.18	-0.1
2,555,302	-		CCNA_02411	0.19	+0.7
2,555,321	-		CCNA_02411	0.22	-1.5
2,555,421	-		CCNA_02411	0.33	-1.9
2,555,423	+		CCNA_02411	0.33	+0.5
2,555,479	+		CCNA_02411	0.40	-0.7
2,555,487	-		CCNA_02411	0.41	+0.5
2,555,527	+		CCNA_02411	0.45	-1.1
2,555,529	-		CCNA_02411	0.46	-1.1
2,555,582	+		CCNA_02411	0.52	-1.2
2,555,582	+		CCNA_02411	0.52	+3.2
2,555,582	+		CCNA_02411	0.52	-1.3
2,555,582	+		CCNA_02411	0.52	-2.9
2,555,590	-		CCNA_02411	0.53	-1.5
2,555,590	-		CCNA_02411	0.53	+0.6
2,555,590	-		CCNA_02411	0.53	-1.4
2,555,590	-		CCNA_02411	0.53	+1.4
2,555,590	-		CCNA_02411	0.53	-0.9
2,555,590	-		CCNA_02411	0.53	+1.5
2,555,609	+		CCNA_02411	0.55	-1.1
2,555,626	+		CCNA_02411	0.57	+0.0
2,555,628	+		CCNA_02411	0.57	+1.3
2,555,628	+		CCNA_02411	0.57	-2.9
2,555,636	-		CCNA_02411	0.58	+1.1
2,555,636	-		CCNA_02411	0.58	+1.5
2,555,658	-		CCNA_02411	0.60	-0.9
2,555,723	+		CCNA_02411	0.68	+3.3
2,555,763	+		CCNA_02411	0.73	+1.3
2,555,771	-		CCNA_02411	0.73	+0.3
2,555,771	-		CCNA_02411	0.73	-0.1
2,555,771	-		CCNA_02411	0.73	+0.6
2,555,795	-		CCNA_02411	0.76	-0.3
2,555,816	+		CCNA_02411	0.79	+0.3
2,555,821	+		CCNA_02411	0.79	+0.4
2,555,829	-		CCNA_02411	0.80	-0.3
2,555,829	-		CCNA_02411	0.80	+1.4
2,555,834	+		CCNA_02411	0.81	+0.8
2,555,861	+		CCNA_02411	0.84	+0.3
2,555,869	-		CCNA_02411	0.85	+2.4
2,555,965	+				+1.3
2,555,972	+				+1.5
2,555,973	-				-0.6
2,556,001	+				-1.0
2,556,003	+				-0.7
2,556,003	+				-1.9
2,556,003	+				-0.6
2,556,006	-				-2.7
2,556,011	-				+0.4
2,556,011	-				-1.0
2,556,011	-				-1.7
2,556,011	-				+1.6
2,556,011	-				-2.0
2,556,075	-				-0.4