Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02156

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
2,311,047	+		CCNA_02155	0.17	+2.9
2,311,048	-		CCNA_02155	0.17	+0.2
2,311,056	-		CCNA_02155	0.18	+0.7
2,311,066	-		CCNA_02155	0.19	+2.5
2,311,105	-		CCNA_02155	0.22	-0.0
2,311,147	-		CCNA_02155	0.26	-0.6
2,311,152	+		CCNA_02155	0.26	+1.0
2,311,175	+		CCNA_02155	0.28	+2.4
2,311,183	+		CCNA_02155	0.29	-1.5
2,311,191	-		CCNA_02155	0.29	+1.5
2,311,260	-		CCNA_02155	0.35	+2.5
2,311,260	-		CCNA_02155	0.35	-1.0
2,311,277	+		CCNA_02155	0.37	-0.5
2,311,283	+		CCNA_02155	0.37	+0.4
2,311,283	+		CCNA_02155	0.37	+1.0
2,311,291	-		CCNA_02155	0.38	+0.5
2,311,302	+		CCNA_02155	0.39	+1.5
2,311,307	+		CCNA_02155	0.39	-1.5
2,311,307	+		CCNA_02155	0.39	-0.7
2,311,307	+		CCNA_02155	0.39	+0.2
2,311,315	-		CCNA_02155	0.40	+1.3
2,311,330	-		CCNA_02155	0.41	-1.5
2,311,383	-		CCNA_02155	0.46	+1.5
2,311,397	+		CCNA_02155	0.47	+1.5
2,311,397	+		CCNA_02155	0.47	-0.3
2,311,397	+		CCNA_02155	0.47	-1.1
2,311,405	-		CCNA_02155	0.47	-1.4
2,311,421	+		CCNA_02155	0.49	+1.0
2,311,473	+		CCNA_02155	0.53	-1.3
2,311,498	+		CCNA_02155	0.55	+1.5
2,311,519	-		CCNA_02155	0.57	-1.2
2,311,519	-		CCNA_02155	0.57	-0.6
2,311,594	+		CCNA_02155	0.63	+2.5
2,311,694	+		CCNA_02155	0.72	-0.0
2,311,717	+		CCNA_02155	0.74	-1.8
2,311,744	-		CCNA_02155	0.76	-0.2
2,311,813	+		CCNA_02155	0.82	-1.2
2,311,813	+		CCNA_02155	0.82	-2.2
2,311,821	+				+2.5
2,311,825	+		CCNA_02155	0.83	-1.8
2,311,862	-		CCNA_02155	0.86	+0.5
2,311,872	+		CCNA_02155	0.87	-0.2
2,311,917	+				-1.1
2,311,921	+				-1.9
2,311,924	-				+2.5
2,311,925	-				-0.3
2,311,929	-				-0.5
2,311,929	-				-1.5
2,311,949	+				+1.1
2,311,957	-				-0.5
2,311,957	-				+4.1
2,311,957	-				-1.0
2,311,957	-				-2.3
2,311,986	+				-0.3
2,311,991	+				+0.3
2,311,999	-				-0.5
2,311,999	-				+1.0
2,311,999	-				-1.6
2,311,999	-				-1.6
2,312,001	+				+0.7
2,312,018	+				-2.2
2,312,018	+				-1.3
2,312,019	+				-0.5
2,312,026	-				-1.9
2,312,026	-				-0.5
2,312,026	-				-3.2
2,312,027	+				+0.5
2,312,027	+				-1.6
2,312,043	-				-3.3
2,312,043	-				-1.2
2,312,050	+				+1.0
2,312,055	+				+1.0
2,312,058	-				-0.0
2,312,058	-				+0.3
2,312,058	-				-1.6
2,312,058	-				-3.1
2,312,069	+				-0.0
2,312,077	-				+2.0
2,312,077	-				+0.5
2,312,111	-				+2.2
2,312,111	-				+1.8
2,312,160	-				+0.1
2,312,226	-		CCNA_02156	0.13	+0.1
2,312,250	+		CCNA_02156	0.15	+1.0
2,312,263	-		CCNA_02156	0.16	+0.8
2,312,285	+		CCNA_02156	0.17	-1.8
2,312,307	+		CCNA_02156	0.19	-1.7
2,312,334	-		CCNA_02156	0.21	+1.5
2,312,360	-		CCNA_02156	0.23	-0.2
2,312,360	-		CCNA_02156	0.23	+1.6
2,312,372	-		CCNA_02156	0.24	+2.0
2,312,373	-		CCNA_02156	0.24	+0.6
2,312,418	+		CCNA_02156	0.27	-1.5
2,312,425	-		CCNA_02156	0.27	+2.4
2,312,426	-		CCNA_02156	0.27	-3.3
2,312,640	-		CCNA_02156	0.43	+0.5
2,312,645	-		CCNA_02156	0.43	+1.5
2,312,692	+		CCNA_02156	0.46	-1.8
2,312,728	-		CCNA_02156	0.49	+1.0
2,312,849	+		CCNA_02156	0.57	+0.5
2,312,849	+		CCNA_02156	0.57	-0.5
2,312,857	-		CCNA_02156	0.58	+1.6
2,312,857	-		CCNA_02156	0.58	+2.1
2,312,857	-		CCNA_02156	0.58	+1.4
2,312,857	-		CCNA_02156	0.58	+1.2
2,312,859	+		CCNA_02156	0.58	+1.5
2,312,859	+		CCNA_02156	0.58	-3.2
2,312,859	+		CCNA_02156	0.58	+2.5
2,312,867	-		CCNA_02156	0.59	+1.8
2,312,867	-		CCNA_02156	0.59	+0.9
2,312,867	-		CCNA_02156	0.59	+0.1
2,312,867	-		CCNA_02156	0.59	+0.8
2,312,867	-		CCNA_02156	0.59	+0.9
2,312,867	-		CCNA_02156	0.59	+1.1
2,312,867	-		CCNA_02156	0.59	+1.3
2,312,927	-		CCNA_02156	0.63	+2.4
2,312,927	-		CCNA_02156	0.63	-0.9
2,312,927	-		CCNA_02156	0.63	+0.0
2,312,960	-		CCNA_02156	0.65	+0.9
2,312,967	-		CCNA_02156	0.66	+0.7
2,313,052	+		CCNA_02156	0.72	+2.5
2,313,072	-		CCNA_02156	0.73	+1.1
2,313,156	+		CCNA_02156	0.79	-2.0
2,313,161	+		CCNA_02156	0.79	+0.5
2,313,176	-		CCNA_02156	0.80	+2.3
2,313,176	-		CCNA_02156	0.80	+0.4
2,313,183	+		CCNA_02156	0.81	+0.2
2,313,192	+		CCNA_02156	0.82	+0.3
2,313,206	+		CCNA_02156	0.83	-0.8
2,313,322	+				-3.1
2,313,325	-				-0.3
2,313,434	+				-0.5
2,313,442	-				-1.5
2,313,461	+				-0.6
2,313,461	+				+2.5
2,313,469	-				-1.4
2,313,469	-				-0.3
2,313,469	-				-1.8
2,313,469	-				+2.0
2,313,469	-				-1.7
2,313,474	-				+1.0
2,313,535	-		CCNA_02157	0.21	+2.0
2,313,545	-		CCNA_02157	0.24	+1.4
2,313,545	-		CCNA_02157	0.24	+0.1
2,313,574	+		CCNA_02157	0.32	-0.0
2,313,576	+		CCNA_02157	0.32	+2.5
2,313,591	-		CCNA_02157	0.37	-1.1
2,313,596	-		CCNA_02157	0.38	-0.7
2,313,596	-		CCNA_02157	0.38	-0.2
2,313,603	-		CCNA_02157	0.40	-3.0
2,313,673	-		CCNA_02157	0.60	+0.3
2,313,673	-		CCNA_02157	0.60	+2.7
2,313,704	-		CCNA_02157	0.69	+0.2
2,313,709	-		CCNA_02157	0.71	+0.4
2,313,714	-		CCNA_02157	0.72	+1.9
2,313,772	-		CCNA_02157	0.89	+0.6
2,313,790	+				+1.5
2,313,810	+				+0.7
2,313,818	-				-2.1
2,313,818	-				+1.4
2,313,818	-				-0.5
2,313,818	-				-1.5
2,313,818	-				-1.2
2,313,853	+				+0.2
2,313,905	-				-0.4
2,313,905	-				+0.9
2,313,906	+				-2.0
2,313,965	+				-0.3
2,314,001	-				+0.1
2,314,021	+				-0.0
2,314,036	+				-0.2
2,314,036	+				-3.2
2,314,046	+				+0.1
2,314,067	-		CCNA_02158	0.10	+0.2
2,314,075	-		CCNA_02158	0.11	-0.0
2,314,077	-		CCNA_02158	0.11	-1.4
2,314,077	-		CCNA_02158	0.11	-0.5
2,314,160	-		CCNA_02158	0.20	+5.7
2,314,176	+		CCNA_02158	0.22	-2.2
2,314,205	+		CCNA_02158	0.25	-0.4
2,314,284	+		CCNA_02158	0.33	-0.0
2,314,286	+		CCNA_02158	0.33	+0.1
2,314,295	+		CCNA_02158	0.34	-0.3
2,314,314	+		CCNA_02158	0.36	+1.3
2,314,332	-		CCNA_02158	0.38	+0.5
2,314,339	+		CCNA_02158	0.39	-0.9
2,314,344	+		CCNA_02158	0.39	-2.0
2,314,353	-		CCNA_02158	0.40	-0.9
2,314,354	-		CCNA_02158	0.40	+0.8
2,314,375	+		CCNA_02158	0.43	+1.8
2,314,375	+		CCNA_02158	0.43	-1.4
2,314,397	-		CCNA_02158	0.45	+2.5
2,314,427	+		CCNA_02158	0.48	-0.7
2,314,444	-		CCNA_02158	0.50	-0.3
2,314,449	-		CCNA_02158	0.50	+0.4