Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02130

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
2,282,934	-		CCNA_02129	0.18	-0.8
2,282,934	-		CCNA_02129	0.18	+0.3
2,282,955	-		CCNA_02129	0.20	-3.2
2,282,955	-		CCNA_02129	0.20	-1.0
2,282,969	+		CCNA_02129	0.21	-0.5
2,282,969	+		CCNA_02129	0.21	-1.1
2,283,057	+		CCNA_02129	0.29	-1.9
2,283,065	-		CCNA_02129	0.29	-2.3
2,283,187	+		CCNA_02129	0.40	-1.6
2,283,202	-		CCNA_02129	0.42	-1.9
2,283,225	+		CCNA_02129	0.44	+1.5
2,283,246	-		CCNA_02129	0.45	-0.4
2,283,251	-		CCNA_02129	0.46	-0.6
2,283,272	-		CCNA_02129	0.48	-0.3
2,283,277	+		CCNA_02129	0.48	-0.3
2,283,278	-		CCNA_02129	0.48	-1.8
2,283,280	-		CCNA_02129	0.48	-0.4
2,283,282	+		CCNA_02129	0.49	+2.2
2,283,290	-		CCNA_02129	0.49	+0.6
2,283,310	-		CCNA_02129	0.51	-2.7
2,283,325	-		CCNA_02129	0.52	-0.5
2,283,328	+		CCNA_02129	0.53	-1.0
2,283,402	-		CCNA_02129	0.59	-2.2
2,283,402	-		CCNA_02129	0.59	-0.1
2,283,405	+		CCNA_02129	0.59	-1.5
2,283,414	+		CCNA_02129	0.60	+3.3
2,283,414	+		CCNA_02129	0.60	+1.3
2,283,414	+		CCNA_02129	0.60	+1.8
2,283,414	+		CCNA_02129	0.60	-1.7
2,283,422	-		CCNA_02129	0.61	-0.0
2,283,422	-		CCNA_02129	0.61	+0.1
2,283,422	-		CCNA_02129	0.61	+1.5
2,283,436	+		CCNA_02129	0.62	-0.3
2,283,437	-		CCNA_02129	0.62	-2.8
2,283,472	+		CCNA_02129	0.65	-2.3
2,283,472	-		CCNA_02129	0.65	-0.8
2,283,505	+		CCNA_02129	0.68	+2.6
2,283,513	-		CCNA_02129	0.69	+2.3
2,283,513	-		CCNA_02129	0.69	-0.0
2,283,513	-		CCNA_02129	0.69	+3.8
2,283,513	-		CCNA_02129	0.69	-1.2
2,283,518	-		CCNA_02129	0.69	-1.3
2,283,518	-		CCNA_02129	0.69	+1.2
2,283,523	-		CCNA_02129	0.70	+0.0
2,283,543	+		CCNA_02129	0.72	+0.6
2,283,547	-		CCNA_02129	0.72	+3.1
2,283,555	+		CCNA_02129	0.73	+0.2
2,283,555	+		CCNA_02129	0.73	-1.8
2,283,563	-		CCNA_02129	0.73	-1.2
2,283,565	+		CCNA_02129	0.74	-0.9
2,283,573	-		CCNA_02129	0.74	-0.1
2,283,573	-		CCNA_02129	0.74	+0.1
2,283,573	-		CCNA_02129	0.74	-2.0
2,283,605	-		CCNA_02129	0.77	+1.0
2,283,649	+		CCNA_02129	0.81	-0.6
2,283,684	+		CCNA_02129	0.84	+0.8
2,283,684	+		CCNA_02129	0.84	-1.7
2,283,684	+		CCNA_02129	0.84	-1.7
2,283,692	-		CCNA_02129	0.85	+1.0
2,283,692	-		CCNA_02129	0.85	+1.3
2,283,717	+		CCNA_02129	0.87	+3.4
2,283,722	+		CCNA_02129	0.87	-0.5
2,283,727	+		CCNA_02129	0.88	-2.1
2,283,732	+		CCNA_02129	0.88	+0.3
2,283,775	-				-3.0
2,283,818	-				-2.3
2,283,918	+				+2.3
2,283,948	-				-1.3
2,283,965	+				-0.5
2,283,998	+				-0.8
2,284,049	-				+2.3
2,284,056	-				-0.9
2,284,057	-				+1.6
2,284,092	-		CCNA_02130	0.11	+2.9
2,284,094	+		CCNA_02130	0.12	-0.9
2,284,117	+		CCNA_02130	0.13	-1.3
2,284,117	+		CCNA_02130	0.13	-2.1
2,284,117	+		CCNA_02130	0.13	+2.7
2,284,125	+		CCNA_02130	0.14	+0.4
2,284,125	+		CCNA_02130	0.14	-1.7
2,284,125	+		CCNA_02130	0.14	-0.7
2,284,125	+		CCNA_02130	0.14	-0.8
2,284,128	-		CCNA_02130	0.14	-1.9
2,284,133	-		CCNA_02130	0.14	+2.8
2,284,133	-		CCNA_02130	0.14	-0.5
2,284,133	-		CCNA_02130	0.14	+0.7
2,284,139	+		CCNA_02130	0.15	-0.9
2,284,152	+		CCNA_02130	0.16	+2.2
2,284,152	+		CCNA_02130	0.16	-0.2
2,284,152	+		CCNA_02130	0.16	+0.9
2,284,160	-		CCNA_02130	0.16	+0.1
2,284,160	-		CCNA_02130	0.16	+1.6
2,284,160	-		CCNA_02130	0.16	+1.4
2,284,172	+		CCNA_02130	0.17	-0.3
2,284,172	+		CCNA_02130	0.17	+2.5
2,284,180	-		CCNA_02130	0.18	-1.8
2,284,185	-		CCNA_02130	0.18	+1.6
2,284,222	+		CCNA_02130	0.20	-0.6
2,284,240	-		CCNA_02130	0.22	-0.1
2,284,327	-		CCNA_02130	0.28	+1.4
2,284,327	-		CCNA_02130	0.28	+0.1
2,284,329	+		CCNA_02130	0.28	-0.3
2,284,332	-		CCNA_02130	0.28	+2.4
2,284,337	-		CCNA_02130	0.29	+0.9
2,284,339	+		CCNA_02130	0.29	-0.5
2,284,339	+		CCNA_02130	0.29	+2.5
2,284,342	-		CCNA_02130	0.29	+0.9
2,284,347	-		CCNA_02130	0.29	+0.7
2,284,457	+		CCNA_02130	0.37	-0.3
2,284,457	+		CCNA_02130	0.37	-0.8
2,284,465	-		CCNA_02130	0.37	-2.2
2,284,487	-		CCNA_02130	0.39	+0.9
2,284,503	-		CCNA_02130	0.40	+1.5
2,284,559	-		CCNA_02130	0.44	-1.8
2,284,581	+		CCNA_02130	0.46	+0.9
2,284,596	+		CCNA_02130	0.47	+2.6
2,284,715	-		CCNA_02130	0.55	-0.4
2,284,730	+		CCNA_02130	0.56	+0.9
2,284,755	+		CCNA_02130	0.58	-0.1
2,284,760	+		CCNA_02130	0.58	-2.6
2,284,762	+		CCNA_02130	0.58	+2.5
2,284,762	+		CCNA_02130	0.58	-0.3
2,284,763	-		CCNA_02130	0.58	+1.2
2,284,763	-		CCNA_02130	0.58	+2.5
2,284,763	-		CCNA_02130	0.58	+0.4
2,284,763	-		CCNA_02130	0.58	+1.0
2,284,770	-		CCNA_02130	0.59	+2.2
2,284,772	+		CCNA_02130	0.59	+1.2
2,284,774	+		CCNA_02130	0.59	-1.5
2,284,781	+		CCNA_02130	0.60	+2.5
2,284,781	+		CCNA_02130	0.60	+1.5
2,284,794	-		CCNA_02130	0.60	+2.2
2,284,794	-		CCNA_02130	0.60	+0.4
2,284,804	-		CCNA_02130	0.61	-1.2
2,284,804	-		CCNA_02130	0.61	-3.6
2,284,820	+		CCNA_02130	0.62	+2.6
2,284,820	+		CCNA_02130	0.62	-0.8
2,284,820	+		CCNA_02130	0.62	-2.6
2,284,828	-		CCNA_02130	0.63	+0.9
2,284,835	+		CCNA_02130	0.63	-2.8
2,284,879	-		CCNA_02130	0.66	-1.9
2,284,913	+		CCNA_02130	0.69	+3.5
2,284,920	+		CCNA_02130	0.69	+0.5
2,284,920	+		CCNA_02130	0.69	+1.9
2,284,921	-		CCNA_02130	0.69	-0.5
2,284,921	-		CCNA_02130	0.69	-1.5
2,284,921	-		CCNA_02130	0.69	-0.7
2,284,921	-		CCNA_02130	0.69	+3.2
2,284,928	-		CCNA_02130	0.70	-3.8
2,284,943	-		CCNA_02130	0.71	+1.5
2,284,945	-		CCNA_02130	0.71	-1.0
2,284,967	-		CCNA_02130	0.73	+0.6
2,285,102	-		CCNA_02130	0.82	+2.0
2,285,137	+		CCNA_02130	0.84	+0.2
2,285,137	+		CCNA_02130	0.84	-2.6
2,285,145	-		CCNA_02130	0.85	-1.6
2,285,145	-		CCNA_02130	0.85	+1.6
2,285,145	-		CCNA_02130	0.85	-0.9
2,285,145	-		CCNA_02130	0.85	+0.6
2,285,225	+				+0.1
2,285,262	-				+1.3
2,285,271	-				+1.4
2,285,274	+				-2.2
2,285,282	-				-0.4
2,285,282	-				+1.2
2,285,282	-				-0.9
2,285,282	-				-1.8
2,285,304	-				+1.3
2,285,304	-				+1.9
2,285,324	-				+0.3
2,285,389	-				-0.9
2,285,389	-				+1.3
2,285,571	+				-0.4
2,285,683	-		CCNA_02131	0.12	-1.3
2,285,724	-		CCNA_02131	0.14	-2.3
2,285,727	+		CCNA_02131	0.14	+1.0
2,285,740	-		CCNA_02131	0.15	-1.6
2,285,740	-		CCNA_02131	0.15	-1.2
2,285,771	-		CCNA_02131	0.16	-2.0
2,285,778	+		CCNA_02131	0.16	-0.0
2,285,786	-		CCNA_02131	0.17	-0.9
2,285,796	-		CCNA_02131	0.17	+1.3
2,285,834	-		CCNA_02131	0.18	+0.8
2,285,904	-		CCNA_02131	0.21	-1.5
2,285,931	+		CCNA_02131	0.22	-1.2
2,285,936	+		CCNA_02131	0.23	-1.6
2,285,936	+		CCNA_02131	0.23	+1.7
2,285,939	-		CCNA_02131	0.23	-1.8
2,285,944	-		CCNA_02131	0.23	-0.6
2,286,016	+		CCNA_02131	0.26	-0.1
2,286,024	-		CCNA_02131	0.26	-0.2
2,286,095	+		CCNA_02131	0.29	+2.5
2,286,103	-		CCNA_02131	0.29	+0.5
2,286,136	-		CCNA_02131	0.31	+0.0
2,286,143	+		CCNA_02131	0.31	-1.9
2,286,143	+		CCNA_02131	0.31	-2.2
2,286,143	+		CCNA_02131	0.31	-1.8
2,286,162	-		CCNA_02131	0.32	-1.6
2,286,213	-		CCNA_02131	0.34	+0.6
2,286,238	-		CCNA_02131	0.35	-1.9
2,286,238	-				-3.2
2,286,245	-		CCNA_02131	0.35	+1.0
2,286,286	+		CCNA_02131	0.37	+0.9
2,286,286	+		CCNA_02131	0.37	-0.8