Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00136

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
144,306	+		CCNA_00134	0.74	-0.9
144,306	+		CCNA_00134	0.74	-0.4
144,306	+		CCNA_00134	0.74	-1.9
144,306	+		CCNA_00134	0.74	-1.3
144,306	+		CCNA_00134	0.74	-0.6
144,306	+		CCNA_00134	0.74	-1.0
144,314	-		CCNA_00134	0.76	+1.5
144,314	-		CCNA_00134	0.76	+1.5
144,368	+		CCNA_00134	0.88	-0.8
144,390	+				-0.6
144,393	-				+1.5
144,406	+				+1.0
144,428	+				-1.1
144,436	-				+1.5
144,445	+				+1.4
144,468	+				+1.5
144,470	-				-1.0
144,472	+				+1.3
144,472	+				+1.2
144,472	+				-0.8
144,472	+				-0.7
144,480	-				-1.5
144,480	-				+1.5
144,480	-				-1.0
144,487	+				-0.5
144,507	-				-0.3
144,771	-		CCNA_00135	0.39	+0.2
144,771	-		CCNA_00135	0.39	+2.5
144,771	-		CCNA_00135	0.39	+0.2
144,794	+		CCNA_00135	0.42	+0.5
144,811	-		CCNA_00135	0.44	+1.5
144,850	+		CCNA_00135	0.49	-1.3
144,872	+		CCNA_00135	0.51	-1.0
144,880	-		CCNA_00135	0.52	-2.2
144,961	+		CCNA_00135	0.62	-1.8
144,971	+		CCNA_00135	0.63	-0.5
144,971	+		CCNA_00135	0.63	+2.5
144,971	+		CCNA_00135	0.63	+0.5
144,979	-		CCNA_00135	0.64	-2.0
144,979	-		CCNA_00135	0.64	+2.5
144,986	+		CCNA_00135	0.65	-2.5
145,004	+		CCNA_00135	0.67	-0.5
145,079	-		CCNA_00135	0.76	-0.8
145,108	+		CCNA_00135	0.80	-1.8
145,116	-		CCNA_00135	0.81	+2.5
145,127	+		CCNA_00135	0.82	+1.0
145,129	+		CCNA_00135	0.82	-1.5
145,129	+		CCNA_00135	0.82	-1.5
145,137	-		CCNA_00135	0.83	-0.6
145,289	+				-0.3
145,297	-				-1.9
145,342	+				-1.2
145,342	+				-0.2
145,342	+				-2.8
145,345	-				-2.8
145,350	-				-1.9
145,378	-				-4.4
145,386	+				-0.3
145,407	+				-1.3
145,457	+		CCNA_00136	0.11	-2.5
145,457	+		CCNA_00136	0.11	+1.8
145,457	+		CCNA_00136	0.11	-2.8
145,457	+		CCNA_00136	0.11	-1.7
145,465	-		CCNA_00136	0.11	-1.0
145,465	-		CCNA_00136	0.11	-2.6
145,465	-		CCNA_00136	0.11	-2.7
145,516	-		CCNA_00136	0.14	-0.9
145,525	+		CCNA_00136	0.15	-0.6
145,532	+		CCNA_00136	0.15	+1.0
145,552	+		CCNA_00136	0.17	-1.7
145,561	-		CCNA_00136	0.17	-0.6
145,564	+		CCNA_00136	0.17	-0.5
145,570	-		CCNA_00136	0.18	-0.2
145,570	-		CCNA_00136	0.18	-1.7
145,570	-		CCNA_00136	0.18	-3.0
145,570	-		CCNA_00136	0.18	+1.8
145,570	-		CCNA_00136	0.18	-2.3
145,587	-		CCNA_00136	0.19	-2.7
145,594	-		CCNA_00136	0.19	-3.0
145,594	-		CCNA_00136	0.19	-2.8
145,603	+		CCNA_00136	0.20	-1.5
145,603	+		CCNA_00136	0.20	-3.7
145,603	+		CCNA_00136	0.20	+2.5
145,616	-		CCNA_00136	0.20	-1.5
145,632	-		CCNA_00136	0.21	-2.5
145,632	-		CCNA_00136	0.21	-0.5
145,632	-		CCNA_00136	0.21	-1.2
145,632	-		CCNA_00136	0.21	-2.4
145,646	-		CCNA_00136	0.22	-1.7
145,655	+		CCNA_00136	0.23	-1.9
145,703	+		CCNA_00136	0.26	+1.1
145,774	-		CCNA_00136	0.30	-1.7
145,774	-		CCNA_00136	0.30	-2.5
145,774	-		CCNA_00136	0.30	-1.3
145,775	+		CCNA_00136	0.30	-2.5
145,842	-		CCNA_00136	0.34	+2.5
145,869	+		CCNA_00136	0.35	-1.9
145,877	-		CCNA_00136	0.36	-0.6
145,958	-		CCNA_00136	0.41	-0.8
145,958	-		CCNA_00136	0.41	+2.5
146,025	-		CCNA_00136	0.45	-3.3
146,033	-		CCNA_00136	0.45	-3.1
146,132	+		CCNA_00136	0.51	+4.1
146,151	-		CCNA_00136	0.52	-0.3
146,156	-		CCNA_00136	0.53	-0.9
146,158	-		CCNA_00136	0.53	-1.4
146,173	+		CCNA_00136	0.54	+2.5
146,196	+		CCNA_00136	0.55	+0.7
146,196	+		CCNA_00136	0.55	-1.5
146,196	+		CCNA_00136	0.55	-2.3
146,196	+		CCNA_00136	0.55	-0.3
146,196	+		CCNA_00136	0.55	-1.7
146,204	-		CCNA_00136	0.55	+0.2
146,204	-		CCNA_00136	0.55	-4.0
146,204	-		CCNA_00136	0.55	-2.3
146,206	-		CCNA_00136	0.56	-0.7
146,267	+		CCNA_00136	0.59	-4.0
146,350	+		CCNA_00136	0.64	+0.5
146,378	+		CCNA_00136	0.66	-1.3
146,378	+		CCNA_00136	0.66	-3.0
146,383	+		CCNA_00136	0.66	+0.4
146,386	-		CCNA_00136	0.66	-1.9
146,401	-		CCNA_00136	0.67	-3.3
146,408	+		CCNA_00136	0.68	-2.2
146,463	+		CCNA_00136	0.71	+1.5
146,464	-		CCNA_00136	0.71	-1.1
146,490	-		CCNA_00136	0.72	+0.1
146,493	-		CCNA_00136	0.73	-1.5
146,495	-		CCNA_00136	0.73	-0.7
146,618	+		CCNA_00136	0.80	-0.9
146,619	+		CCNA_00136	0.80	-2.6
146,626	-		CCNA_00136	0.81	-1.7
146,691	+		CCNA_00136	0.84	-2.5
146,721	-		CCNA_00136	0.86	+0.0
146,811	+				-1.4
146,857	+				-1.9
146,866	-				-3.0
146,871	+				-3.7
146,879	-				+0.2
146,908	+				+2.2
146,908	-				+1.1
146,910	+				-2.1
146,910	+				+1.0
147,060	-				-1.7
147,067	+				-1.0
147,080	-				+1.2
147,136	-				-0.6
147,157	+		CCNA_00137	0.11	-2.3
147,256	-		CCNA_00137	0.17	+0.8
147,262	-		CCNA_00137	0.18	-1.7
147,403	-		CCNA_00137	0.27	+1.8
147,408	-		CCNA_00137	0.27	+0.3
147,434	+		CCNA_00137	0.29	-1.0
147,442	-		CCNA_00137	0.30	-3.2
147,564	+		CCNA_00137	0.37	+1.5
147,564	+		CCNA_00137	0.37	+1.0
147,572	-		CCNA_00137	0.38	-2.1
147,572	-		CCNA_00137	0.38	-1.3
147,572	-		CCNA_00137	0.38	-1.3
147,572	-		CCNA_00137	0.38	-1.4
147,572	-		CCNA_00137	0.38	+1.0
147,577	-		CCNA_00137	0.38	+2.5
147,590	-		CCNA_00137	0.39	+1.0
147,627	-		CCNA_00137	0.41	-0.8
147,673	+		CCNA_00137	0.44	-0.3
147,681	-		CCNA_00137	0.45	-0.6
147,805	+		CCNA_00137	0.53	+1.4
147,842	+		CCNA_00137	0.55	-1.5
147,842	+		CCNA_00137	0.55	-0.0
147,850	-		CCNA_00137	0.56	+0.2
147,850	-		CCNA_00137	0.56	+1.5
147,922	+		CCNA_00137	0.61	-0.5
147,922	+		CCNA_00137	0.61	-1.0
147,928	+		CCNA_00137	0.61	-3.6
147,928	+		CCNA_00137	0.61	-2.0
147,928	+		CCNA_00137	0.61	+1.0
147,936	-		CCNA_00137	0.61	-1.5
147,936	-		CCNA_00137	0.61	-1.0
147,936	-		CCNA_00137	0.61	-2.5
147,936	-		CCNA_00137	0.61	-2.9
147,936	-		CCNA_00137	0.61	+1.5
147,941	-		CCNA_00137	0.62	-2.4
147,941	-		CCNA_00137	0.62	+1.5