Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00074

Experiment: PYE 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep2 28 days
75,481	+		CCNA_00073	0.59	+0.7
75,520	-		CCNA_00073	0.62	-0.1
75,520	-		CCNA_00073	0.62	-0.8
75,537	-		CCNA_00073	0.63	+0.2
75,611	+		CCNA_00073	0.68	+0.7
75,655	+		CCNA_00073	0.70	+0.2
75,659	+		CCNA_00073	0.71	+0.4
75,716	+		CCNA_00073	0.74	+1.6
75,724	-		CCNA_00073	0.75	+0.1
75,727	+		CCNA_00073	0.75	+0.5
75,727	+		CCNA_00073	0.75	-1.0
75,752	-		CCNA_00073	0.77	-1.0
75,769	-		CCNA_00073	0.78	-1.2
75,776	+		CCNA_00073	0.78	+1.3
75,776	+		CCNA_00073	0.78	-0.3
75,784	+		CCNA_00073	0.79	+0.0
75,791	+		CCNA_00073	0.79	+0.1
75,916	+		CCNA_00073	0.87	+0.6
75,924	-		CCNA_00073	0.88	+0.1
75,930	-		CCNA_00073	0.88	+0.1
75,941	+		CCNA_00073	0.89	+1.0
75,941	+		CCNA_00073	0.89	+0.1
75,949	-		CCNA_00073	0.90	-1.1
75,993	+				+0.2
76,001	-				-0.8
76,052	+				-1.2
76,277	+				+0.9
76,286	-				+0.3
76,286	-				-1.3
76,312	+				+1.3
76,345	+				+0.0
76,371	-				-3.0
76,389	+				+0.7
76,392	-				-0.5
76,457	+				+0.1
76,457	+				-0.1
76,457	+				-0.8
76,462	+				+0.5
76,465	-				+1.3
76,465	-				-0.2
76,465	-				-0.3
76,465	-				-2.9
76,465	-				+0.2
76,465	-				+0.0
76,470	-				-0.1
76,487	+				+2.0
76,487	+				-0.8
76,495	-				+0.9
76,495	-				+0.5
76,495	-				-0.0
76,495	-				-0.9
76,499	+				+0.5
76,536	-				-0.3
76,546	-				-1.2
76,570	-				-1.0
76,582	-				-0.2
76,655	+				-0.3
76,683	-				-0.6
76,683	-				-3.9
76,683	-				-0.9
76,683	-				-1.4
76,683	-				-1.1
76,690	+				+0.3
76,697	+				-0.4
76,722	-		CCNA_00074	0.11	-0.9
76,725	+		CCNA_00074	0.11	-0.5
76,725	+		CCNA_00074	0.11	-0.3
76,733	-		CCNA_00074	0.12	-0.8
76,733	-		CCNA_00074	0.12	-0.4
76,799	-		CCNA_00074	0.15	+0.2
76,835	-		CCNA_00074	0.16	-0.3
76,885	-		CCNA_00074	0.19	+0.5
76,891	-		CCNA_00074	0.19	-2.7
76,963	-		CCNA_00074	0.22	-1.0
77,011	+		CCNA_00074	0.24	-1.6
77,011	+				+0.4
77,011	+		CCNA_00074	0.24	-1.0
77,018	-		CCNA_00074	0.25	-2.3
77,019	-		CCNA_00074	0.25	-0.6
77,019	-		CCNA_00074	0.25	-1.0
77,019	-		CCNA_00074	0.25	-0.9
77,153	+		CCNA_00074	0.31	+2.0
77,219	+		CCNA_00074	0.34	-1.0
77,232	-		CCNA_00074	0.34	-1.8
77,260	-		CCNA_00074	0.36	-2.3
77,279	-		CCNA_00074	0.36	-0.6
77,341	-		CCNA_00074	0.39	-0.5
77,423	-		CCNA_00074	0.43	-2.5
77,482	-		CCNA_00074	0.46	-0.7
77,505	-		CCNA_00074	0.47	-0.3
77,506	+		CCNA_00074	0.47	-1.3
77,514	-		CCNA_00074	0.47	-2.1
77,520	-		CCNA_00074	0.47	-2.1
77,528	+		CCNA_00074	0.48	-0.5
77,528	+		CCNA_00074	0.48	-1.8
77,528	+		CCNA_00074	0.48	-0.8
77,533	+		CCNA_00074	0.48	-2.9
77,536	-		CCNA_00074	0.48	-2.4
77,536	-		CCNA_00074	0.48	-3.2
77,536	-		CCNA_00074	0.48	+0.3
77,536	-		CCNA_00074	0.48	-1.5
77,536	-		CCNA_00074	0.48	+0.5
77,541	-		CCNA_00074	0.48	-1.4
77,541	-		CCNA_00074	0.48	-0.9
77,541	-		CCNA_00074	0.48	-1.4
77,561	+		CCNA_00074	0.49	-1.5
77,564	+		CCNA_00074	0.49	+2.5
77,583	-		CCNA_00074	0.50	+0.6
77,587	+		CCNA_00074	0.50	+0.5
77,588	+		CCNA_00074	0.50	-0.8
77,588	+		CCNA_00074	0.50	-0.9
77,588	+		CCNA_00074	0.50	-1.9
77,590	-		CCNA_00074	0.51	-1.3
77,590	-		CCNA_00074	0.51	-2.7
77,590	-		CCNA_00074	0.51	-2.0
77,595	-		CCNA_00074	0.51	-1.2
77,595	-		CCNA_00074	0.51	-0.5
77,596	-		CCNA_00074	0.51	-0.1
77,596	-		CCNA_00074	0.51	-0.1
77,596	-		CCNA_00074	0.51	-1.1
77,633	+		CCNA_00074	0.52	-1.6
77,650	+		CCNA_00074	0.53	+1.0
77,677	+		CCNA_00074	0.54	+0.5
77,677	+		CCNA_00074	0.54	-1.4
77,712	-		CCNA_00074	0.56	-0.5
77,748	-		CCNA_00074	0.58	-1.4
77,753	-		CCNA_00074	0.58	-1.8
77,765	-		CCNA_00074	0.58	-0.9
77,767	+		CCNA_00074	0.59	+1.5
77,768	+		CCNA_00074	0.59	-0.4
77,778	-		CCNA_00074	0.59	-2.0
77,792	+		CCNA_00074	0.60	-2.5
77,792	+		CCNA_00074	0.60	+0.5
77,792	+		CCNA_00074	0.60	-2.7
77,800	-		CCNA_00074	0.60	-0.0
77,800	-		CCNA_00074	0.60	-0.6
77,800	-		CCNA_00074	0.60	+1.3
77,800	-		CCNA_00074	0.60	-1.6
77,862	+		CCNA_00074	0.63	-0.5
77,896	+		CCNA_00074	0.64	+0.5
77,899	+		CCNA_00074	0.65	-0.8
77,902	-		CCNA_00074	0.65	-0.4
77,912	-		CCNA_00074	0.65	-2.3
77,918	+		CCNA_00074	0.65	-1.3
77,926	-		CCNA_00074	0.66	-3.7
77,937	+		CCNA_00074	0.66	+0.1
77,937	+		CCNA_00074	0.66	-1.3
77,945	-		CCNA_00074	0.67	-3.2
77,951	+		CCNA_00074	0.67	-0.9
77,985	-		CCNA_00074	0.68	-1.5
77,987	-		CCNA_00074	0.69	-2.8
77,990	+		CCNA_00074	0.69	+0.8
78,000	+		CCNA_00074	0.69	-1.5
78,038	+		CCNA_00074	0.71	-0.1
78,046	-		CCNA_00074	0.71	-3.1
78,046	-		CCNA_00074	0.71	-1.8
78,050	+		CCNA_00074	0.71	-0.3
78,063	-		CCNA_00074	0.72	-3.2
78,063	-		CCNA_00074	0.72	-0.6
78,065	-		CCNA_00074	0.72	-1.9
78,095	-		CCNA_00074	0.73	-1.7
78,143	+		CCNA_00074	0.76	-0.4
78,151	-		CCNA_00074	0.76	-1.8
78,209	+		CCNA_00074	0.79	+0.6
78,251	-		CCNA_00074	0.81	-2.4
78,252	-		CCNA_00074	0.81	-0.2
78,385	-		CCNA_00074	0.87	-1.0
78,480	-				-0.9
78,485	-				+0.2
78,495	+				-1.6
78,524	+				-0.0
78,527	+				-2.8
78,535	-				-1.7
78,545	+				-1.7
78,553	-				-2.7
78,553	-				-1.0
78,601	-				-1.6
78,631	+				-0.9
78,644	-				-0.4
78,644	-				+0.5
78,701	+				-1.3
78,701	+				+2.5
78,709	-				-0.5
78,709	-				+0.7
78,709	-				-0.2
78,757	+				+2.5
78,757	+				-0.5
78,765	-				-0.5
78,775	-				-0.9
78,783	+				-2.5
78,832	-		CCNA_00075	0.11	+4.1
78,925	-		CCNA_00075	0.18	-1.8
78,930	-		CCNA_00075	0.19	-1.8
78,947	-		CCNA_00075	0.20	-0.9
78,955	+		CCNA_00075	0.21	-1.2
78,956	-		CCNA_00075	0.21	+1.0
78,964	-		CCNA_00075	0.22	-1.7
78,968	+		CCNA_00075	0.22	+0.4
78,985	-		CCNA_00075	0.23	+1.7
78,997	+		CCNA_00075	0.24	-3.5
78,997	+		CCNA_00075	0.24	+0.1
79,005	-		CCNA_00075	0.25	-0.4
79,007	+		CCNA_00075	0.25	-0.9
79,010	-		CCNA_00075	0.25	+2.5
79,017	+		CCNA_00075	0.26	-1.5
79,029	+		CCNA_00075	0.27	-2.2
79,037	-		CCNA_00075	0.28	+1.4
79,039	+		CCNA_00075	0.28	+2.2
79,047	-		CCNA_00075	0.29	+1.1
79,052	+		CCNA_00075	0.29	-0.1
79,060	-		CCNA_00075	0.30	+1.0
79,060	-		CCNA_00075	0.30	+0.0
79,060	-		CCNA_00075	0.30	+0.8
79,060	-		CCNA_00075	0.30	-0.6
79,086	-		CCNA_00075	0.32	-0.2
79,106	-		CCNA_00075	0.33	-1.7
79,116	-		CCNA_00075	0.34	-0.2
79,139	+		CCNA_00075	0.36	-1.3
79,145	-		CCNA_00075	0.37	-0.1
79,176	-		CCNA_00075	0.39	-1.5
79,182	+		CCNA_00075	0.40	-2.7
79,227	-		CCNA_00075	0.43	-2.1
79,264	-		CCNA_00075	0.47	-2.1
79,289	+		CCNA_00075	0.49	-0.8
79,297	-		CCNA_00075	0.49	-0.9
79,300	+		CCNA_00075	0.50	-1.5
79,309	+		CCNA_00075	0.50	-0.5
79,309	+		CCNA_00075	0.50	-0.8
79,314	+		CCNA_00075	0.51	-0.3
79,357	+		CCNA_00075	0.54	-1.1
79,369	+		CCNA_00075	0.55	-1.3
79,429	+		CCNA_00075	0.60	-1.4
79,437	-		CCNA_00075	0.61	+0.2
79,437	-		CCNA_00075	0.61	+3.7
79,437	-		CCNA_00075	0.61	+0.9
79,437	-		CCNA_00075	0.61	-1.5
79,437	-		CCNA_00075	0.61	-1.5
79,445	-		CCNA_00075	0.62	+0.3
79,460	+		CCNA_00075	0.63	-0.6
79,470	-		CCNA_00075	0.64	-1.3
79,491	-		CCNA_00075	0.65	-0.8
79,595	+		CCNA_00075	0.74	-0.5
79,612	+		CCNA_00075	0.75	-2.7
79,621	+		CCNA_00075	0.76	+0.5
79,643	+		CCNA_00075	0.78	-1.0
79,674	-		CCNA_00075	0.81	+0.7