Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2989 and DvMF_2990 are separated by 405 nucleotides DvMF_2990 and DvMF_2991 are separated by 84 nucleotides
DvMF_2989: DvMF_2989 - Na+/H+ antiporter NhaA (RefSeq), at 3,769,312 to 3,770,694
_2989
DvMF_2990: DvMF_2990 - Isoprenylcysteine carboxyl methyltransferase (RefSeq), at 3,771,100 to 3,771,780
_2990
DvMF_2991: DvMF_2991 - Radical SAM domain protein (RefSeq), at 3,771,865 to 3,773,058
_2991
Position (kb)
3771
3772 Strain fitness (log2 ratio)
-1
0
1 at 3770.107 kb on - strand, within DvMF_2989 at 3770.107 kb on - strand, within DvMF_2989 at 3770.109 kb on + strand, within DvMF_2989 at 3770.154 kb on - strand, within DvMF_2989 at 3770.244 kb on + strand, within DvMF_2989 at 3770.246 kb on + strand, within DvMF_2989 at 3770.246 kb on + strand, within DvMF_2989 at 3770.246 kb on + strand, within DvMF_2989 at 3770.254 kb on - strand, within DvMF_2989 at 3770.254 kb on - strand, within DvMF_2989 at 3770.352 kb on + strand, within DvMF_2989 at 3770.660 kb on - strand at 3770.796 kb on - strand at 3770.870 kb on - strand at 3770.905 kb on - strand at 3770.945 kb on + strand at 3771.055 kb on + strand at 3771.137 kb on - strand at 3771.455 kb on - strand, within DvMF_2990 at 3771.774 kb on + strand at 3771.891 kb on - strand at 3772.028 kb on - strand, within DvMF_2991 at 3772.043 kb on + strand, within DvMF_2991 at 3772.190 kb on + strand, within DvMF_2991 at 3772.208 kb on + strand, within DvMF_2991 at 3772.333 kb on + strand, within DvMF_2991 at 3772.359 kb on + strand, within DvMF_2991 at 3772.663 kb on - strand, within DvMF_2991
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,770,107 - DvMF_2989 0.57 -0.8 3,770,107 - DvMF_2989 0.57 -1.5 3,770,109 + DvMF_2989 0.58 -0.8 3,770,154 - DvMF_2989 0.61 -0.9 3,770,244 + DvMF_2989 0.67 +0.0 3,770,246 + DvMF_2989 0.68 -1.2 3,770,246 + DvMF_2989 0.68 -0.4 3,770,246 + DvMF_2989 0.68 -0.6 3,770,254 - DvMF_2989 0.68 +0.0 3,770,254 - DvMF_2989 0.68 -1.3 3,770,352 + DvMF_2989 0.75 -1.1 3,770,660 - -0.8 3,770,796 - -0.4 3,770,870 - -0.4 3,770,905 - -0.9 3,770,945 + -0.4 3,771,055 + -0.7 3,771,137 - -0.4 3,771,455 - DvMF_2990 0.52 +0.8 3,771,774 + -0.8 3,771,891 - -0.5 3,772,028 - DvMF_2991 0.14 -0.4 3,772,043 + DvMF_2991 0.15 -0.8 3,772,190 + DvMF_2991 0.27 -1.3 3,772,208 + DvMF_2991 0.29 -1.5 3,772,333 + DvMF_2991 0.39 -0.6 3,772,359 + DvMF_2991 0.41 -0.9 3,772,663 - DvMF_2991 0.67 -0.4
Or see this region's nucleotide sequence